RNA–Protein interactions for RNA: ENST00000559888.1

AP3B2-212, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

TSL 2

Gene AP3B2, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-212ENST00000559888 NISCHQ9Y2I1 1504 aa38.11■■■■□ 3.69
AP3B2-212ENST00000559888 ABCC9O60706 1549 aa34.35■■■■□ 3.09
AP3B2-212ENST00000559888 CCDC180Q9P1Z9 1646 aa34.17■■■■□ 3.06
AP3B2-212ENST00000559888 RB1CC1Q8TDY2 1594 aa32.62■■■□□ 2.81
AP3B2-212ENST00000559888 NACADO15069 1562 aa32.38■■■□□ 2.77
AP3B2-212ENST00000559888 DNAJC5BQ9UF47 199 aa32.37■■■□□ 2.77
AP3B2-212ENST00000559888 DCAF8L2P0C7V8 631 aa32.33■■■□□ 2.77
AP3B2-212ENST00000559888 PABPN1Q86U42 306 aaKnown RBP eCLIP32.02■■■□□ 2.72
AP3B2-212ENST00000559888 MYO15BQ96JP2 1530 aa31.9■■■□□ 2.7
AP3B2-212ENST00000559888 UNC13AQ9UPW8 1703 aa31.83■■■□□ 2.69
AP3B2-212ENST00000559888 BICRAQ9NZM4 1560 aa31.67■■■□□ 2.66
AP3B2-212ENST00000559888 ZCCHC6Q5VYS8 1495 aaKnown RBP31.53■■■□□ 2.64
AP3B2-212ENST00000559888 DCAF1Q9Y4B6 1507 aa31.45■■■□□ 2.63
AP3B2-212ENST00000559888 SHROOM4Q9ULL8 1493 aa31.21■■■□□ 2.59
AP3B2-212ENST00000559888 SCRIBQ14160 1630 aa31.16■■■□□ 2.58
AP3B2-212ENST00000559888 CC2D2AQ9P2K1 1620 aa30.99■■■□□ 2.55
AP3B2-212ENST00000559888 CECR2Q9BXF3 1484 aa30.95■■■□□ 2.54
AP3B2-212ENST00000559888 EIF4G1Q04637 1599 aaKnown RBP30.89■■■□□ 2.54
AP3B2-212ENST00000559888 NCAPD3P42695 1498 aa29.93■■■□□ 2.38
AP3B2-212ENST00000559888 ATAD2BQ9ULI0 1458 aa29.81■■■□□ 2.36
AP3B2-212ENST00000559888 DNAJC5Q9H3Z4 198 aa29.79■■■□□ 2.36
AP3B2-212ENST00000559888 SMARCA4P51532 1647 aa29.71■■■□□ 2.35
AP3B2-212ENST00000559888 SMARCA2P51531 1590 aa29.69■■■□□ 2.34
AP3B2-212ENST00000559888 ERCC6Q03468 1493 aa29.65■■■□□ 2.34
AP3B2-212ENST00000559888 HMGXB3Q12766 1538 aa29.64■■■□□ 2.34
AP3B2-212ENST00000559888 CUX2O14529 1486 aa29.61■■■□□ 2.33
AP3B2-212ENST00000559888 BAZ1AQ9NRL2 1556 aaPredicted RBP29.57■■■□□ 2.32
AP3B2-212ENST00000559888 BAZ1BQ9UIG0 1483 aaKnown RBP29.5■■■□□ 2.31
AP3B2-212ENST00000559888 NESP48681 1621 aa29.47■■■□□ 2.31
AP3B2-212ENST00000559888 PEG3Q9GZU2 1588 aa29.43■■■□□ 2.3
AP3B2-212ENST00000559888 MROH2BQ7Z745 1585 aa29.37■■■□□ 2.29
AP3B2-212ENST00000559888 LAMC3Q9Y6N6 1575 aa29.22■■■□□ 2.27
AP3B2-212ENST00000559888 THOC2Q8NI27 1593 aaKnown RBP29.13■■■□□ 2.25
AP3B2-212ENST00000559888 PDS5BQ9NTI5 1447 aa29.11■■■□□ 2.25
AP3B2-212ENST00000559888 CADPSQ9ULU8 1353 aa29.03■■■□□ 2.24
AP3B2-212ENST00000559888 KIF21AQ7Z4S6 1674 aa29.03■■■□□ 2.24
AP3B2-212ENST00000559888 WIZO95785 1651 aa28.99■■■□□ 2.23
AP3B2-212ENST00000559888 MRC2Q9UBG0 1479 aa28.82■■■□□ 2.2
AP3B2-212ENST00000559888 RSF1Q96T23 1441 aaPredicted RBP28.75■■■□□ 2.19
AP3B2-212ENST00000559888 WDR62O43379 1518 aa28.74■■■□□ 2.19
AP3B2-212ENST00000559888 CEP164Q9UPV0 1460 aa28.68■■■□□ 2.18
AP3B2-212ENST00000559888 FANCD2Q9BXW9 1451 aa28.66■■■□□ 2.18
AP3B2-212ENST00000559888 CFTRP13569 1480 aa28.66■■■□□ 2.18
AP3B2-212ENST00000559888 TOP2AP11388 1531 aaKnown RBP28.6■■■□□ 2.17
AP3B2-212ENST00000559888 TRIM41Q8WV44 630 aa28.43■■■□□ 2.14
AP3B2-212ENST00000559888 URB2Q14146 1524 aaKnown RBP28.43■■■□□ 2.14
AP3B2-212ENST00000559888 OSCARQ8IYS5 282 aa28.35■■■□□ 2.13
AP3B2-212ENST00000559888 CCDC88BA6NC98 1476 aa28.34■■■□□ 2.13
AP3B2-212ENST00000559888 PRDM2Q13029 1718 aa28.26■■■□□ 2.12
AP3B2-212ENST00000559888 IFT140Q96RY7 1462 aa28.14■■■□□ 2.09
AP3B2-212ENST00000559888 TOPBP1Q92547 1522 aa28.11■■■□□ 2.09
AP3B2-212ENST00000559888 ZNF608Q9ULD9 1512 aaPredicted RBP28.11■■■□□ 2.09
AP3B2-212ENST00000559888 ABCC8Q09428 1581 aa28.06■■■□□ 2.08
AP3B2-212ENST00000559888 DNMBPQ6XZF7 1577 aa27.98■■■□□ 2.07
AP3B2-212ENST00000559888 EIF4G3O43432 1585 aaKnown RBP27.89■■■□□ 2.05
AP3B2-212ENST00000559888 RIMBP3CA6NJZ7 1639 aa27.87■■■□□ 2.05
AP3B2-212ENST00000559888 RIMBP3BA6NNM3 1639 aa27.87■■■□□ 2.05
AP3B2-212ENST00000559888 RIMBP3Q9UFD9 1639 aa27.87■■■□□ 2.05
AP3B2-212ENST00000559888 AQRO60306 1485 aaKnown RBP eCLIP27.87■■■□□ 2.05
AP3B2-212ENST00000559888 TARBP1Q13395 1621 aaKnown RBP27.85■■■□□ 2.05
AP3B2-212ENST00000559888 POLA1P09884 1462 aaPredicted RBP27.81■■■□□ 2.04
AP3B2-212ENST00000559888 ARHGEF11O15085 1522 aa27.79■■■□□ 2.04
AP3B2-212ENST00000559888 FBLN2P98095 1184 aa27.75■■■□□ 2.03
AP3B2-212ENST00000559888 RAD54L2Q9Y4B4 1467 aa27.74■■■□□ 2.03
AP3B2-212ENST00000559888 SOGA1O94964 1423 aa27.74■■■□□ 2.03
AP3B2-212ENST00000559888 CHD1O14646 1710 aa27.7■■■□□ 2.03
AP3B2-212ENST00000559888 TDRD9Q8NDG6 1382 aaKnown RBP27.7■■■□□ 2.02
AP3B2-212ENST00000559888 CYB5RLQ6IPT4 315 aa27.69■■■□□ 2.02
AP3B2-212ENST00000559888 FGD5Q6ZNL6 1462 aa27.63■■■□□ 2.01
AP3B2-212ENST00000559888 CUX1P39880 1505 aa27.58■■■□□ 2.01
AP3B2-212ENST00000559888 SNAPC4Q5SXM2 1469 aa27.53■■■□□ 2
AP3B2-212ENST00000559888 WDR97A6NE52 1622 aa27.52■■■□□ 2
AP3B2-212ENST00000559888 CHMP7Q8WUX9 453 aaPredicted RBP27.52■■■□□ 2
AP3B2-212ENST00000559888 ARAP1Q96P48 1450 aa27.51■■■□□ 2
AP3B2-212ENST00000559888 SUPT5HO00267 1087 aaKnown RBP27.48■■□□□ 1.99
AP3B2-212ENST00000559888 GRIN2BQ13224 1484 aa27.47■■□□□ 1.99
AP3B2-212ENST00000559888 MAGI1Q96QZ7 1491 aaPredicted RBP27.46■■□□□ 1.99
AP3B2-212ENST00000559888 TRHP20396 242 aaPredicted RBP27.4■■□□□ 1.98
AP3B2-212ENST00000559888 CLASP1Q7Z460 1538 aa27.4■■□□□ 1.98
AP3B2-212ENST00000559888 SYNJ2O15056 1496 aa27.38■■□□□ 1.97
AP3B2-212ENST00000559888 SYNJ1O43426 1573 aa27.38■■□□□ 1.97
AP3B2-212ENST00000559888 GAPVD1Q14C86 1478 aa27.37■■□□□ 1.97
AP3B2-212ENST00000559888 ABCA10Q8WWZ4 1543 aa27.31■■□□□ 1.96
AP3B2-212ENST00000559888 PBRM1Q86U86 1689 aa27.28■■□□□ 1.96
AP3B2-212ENST00000559888 ABCA5Q8WWZ7 1642 aa27.23■■□□□ 1.95
AP3B2-212ENST00000559888 WRNQ14191 1432 aaPredicted RBP eCLIP27.22■■□□□ 1.95
AP3B2-212ENST00000559888 TOP2BQ02880 1626 aa27.1■■□□□ 1.93
AP3B2-212ENST00000559888 GRIN2AQ12879 1464 aa27.1■■□□□ 1.93
AP3B2-212ENST00000559888 BIVM-ERCC5R4GMW8 1640 aa27.08■■□□□ 1.93
AP3B2-212ENST00000559888 ADAMTS12P58397 1594 aa27.03■■□□□ 1.92
AP3B2-212ENST00000559888 FHAD1B1AJZ9 1412 aa27.02■■□□□ 1.92
AP3B2-212ENST00000559888 NUP160Q12769 1436 aa27.02■■□□□ 1.92
AP3B2-212ENST00000559888 CEP170Q5SW79 1584 aa26.99■■□□□ 1.91
AP3B2-212ENST00000559888 ERCC6L2Q5T890 1561 aa26.99■■□□□ 1.91
AP3B2-212ENST00000559888 ERICH3Q5RHP9 1530 aa26.95■■□□□ 1.91
AP3B2-212ENST00000559888 SHROOM2Q13796 1616 aa26.87■■□□□ 1.89
AP3B2-212ENST00000559888 JPH4Q96JJ6 628 aa26.83■■□□□ 1.89
AP3B2-212ENST00000559888 PRG4Q92954 1404 aaPredicted RBP26.8■■□□□ 1.88
AP3B2-212ENST00000559888 AEBP2Q6ZN18 517 aaPredicted RBP26.67■■□□□ 1.86
AP3B2-212ENST00000559888 IGF1RP08069 1367 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms