RNA–Protein interactions for RNA: ENST00000559864.1

RNF213-209, Transcript of ring finger protein 213, humanhuman

TSL 3

Gene RNF213, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-209ENST00000559864 NISCHQ9Y2I1 1504 aa24.64■■□□□ 1.53
RNF213-209ENST00000559864 CCDC180Q9P1Z9 1646 aa22.07■■□□□ 1.12
RNF213-209ENST00000559864 ABCC9O60706 1549 aa21.77■■□□□ 1.08
RNF213-209ENST00000559864 RB1CC1Q8TDY2 1594 aa20.84■□□□□ 0.93
RNF213-209ENST00000559864 NACADO15069 1562 aa20.73■□□□□ 0.91
RNF213-209ENST00000559864 DCAF8L2P0C7V8 631 aa20.56■□□□□ 0.88
RNF213-209ENST00000559864 ZCCHC6Q5VYS8 1495 aaKnown RBP20.52■□□□□ 0.88
RNF213-209ENST00000559864 MYO15BQ96JP2 1530 aa20.52■□□□□ 0.87
RNF213-209ENST00000559864 UNC13AQ9UPW8 1703 aa20.44■□□□□ 0.86
RNF213-209ENST00000559864 DCAF1Q9Y4B6 1507 aa20.37■□□□□ 0.85
RNF213-209ENST00000559864 BICRAQ9NZM4 1560 aa20.25■□□□□ 0.83
RNF213-209ENST00000559864 PABPN1Q86U42 306 aaKnown RBP eCLIP20.24■□□□□ 0.83
RNF213-209ENST00000559864 SCRIBQ14160 1630 aa20.14■□□□□ 0.81
RNF213-209ENST00000559864 DNAJC5BQ9UF47 199 aa20.12■□□□□ 0.81
RNF213-209ENST00000559864 SHROOM4Q9ULL8 1493 aa19.98■□□□□ 0.79
RNF213-209ENST00000559864 EIF4G1Q04637 1599 aaKnown RBP19.73■□□□□ 0.75
RNF213-209ENST00000559864 CC2D2AQ9P2K1 1620 aa19.7■□□□□ 0.74
RNF213-209ENST00000559864 CECR2Q9BXF3 1484 aa19.57■□□□□ 0.72
RNF213-209ENST00000559864 SMARCA4P51532 1647 aa19.22■□□□□ 0.67
RNF213-209ENST00000559864 BAZ1AQ9NRL2 1556 aaPredicted RBP19.12■□□□□ 0.65
RNF213-209ENST00000559864 ATAD2BQ9ULI0 1458 aa19.11■□□□□ 0.65
RNF213-209ENST00000559864 NCAPD3P42695 1498 aa19.1■□□□□ 0.65
RNF213-209ENST00000559864 SMARCA2P51531 1590 aa19.08■□□□□ 0.65
RNF213-209ENST00000559864 HMGXB3Q12766 1538 aa19.06■□□□□ 0.64
RNF213-209ENST00000559864 MROH2BQ7Z745 1585 aa19.01■□□□□ 0.63
RNF213-209ENST00000559864 PEG3Q9GZU2 1588 aa19.01■□□□□ 0.63
RNF213-209ENST00000559864 BAZ1BQ9UIG0 1483 aaKnown RBP18.96■□□□□ 0.63
RNF213-209ENST00000559864 WIZO95785 1651 aa18.82■□□□□ 0.6
RNF213-209ENST00000559864 NESP48681 1621 aa18.79■□□□□ 0.6
RNF213-209ENST00000559864 ERCC6Q03468 1493 aa18.77■□□□□ 0.59
RNF213-209ENST00000559864 LAMC3Q9Y6N6 1575 aa18.69■□□□□ 0.58
RNF213-209ENST00000559864 RSF1Q96T23 1441 aaPredicted RBP18.66■□□□□ 0.58
RNF213-209ENST00000559864 CUX2O14529 1486 aa18.65■□□□□ 0.58
RNF213-209ENST00000559864 KIF21AQ7Z4S6 1674 aa18.61■□□□□ 0.57
RNF213-209ENST00000559864 THOC2Q8NI27 1593 aaKnown RBP18.6■□□□□ 0.57
RNF213-209ENST00000559864 TOP2AP11388 1531 aaKnown RBP18.59■□□□□ 0.57
RNF213-209ENST00000559864 CADPSQ9ULU8 1353 aa18.53■□□□□ 0.56
RNF213-209ENST00000559864 PDS5BQ9NTI5 1447 aa18.5■□□□□ 0.55
RNF213-209ENST00000559864 CFTRP13569 1480 aa18.39■□□□□ 0.54
RNF213-209ENST00000559864 MRC2Q9UBG0 1479 aa18.39■□□□□ 0.54
RNF213-209ENST00000559864 CEP164Q9UPV0 1460 aa18.38■□□□□ 0.53
RNF213-209ENST00000559864 WDR62O43379 1518 aa18.37■□□□□ 0.53
RNF213-209ENST00000559864 FANCD2Q9BXW9 1451 aa18.36■□□□□ 0.53
RNF213-209ENST00000559864 PRDM2Q13029 1718 aa18.35■□□□□ 0.53
RNF213-209ENST00000559864 CCDC88BA6NC98 1476 aa18.33■□□□□ 0.52
RNF213-209ENST00000559864 DNAJC5Q9H3Z4 198 aa18.26■□□□□ 0.51
RNF213-209ENST00000559864 URB2Q14146 1524 aaKnown RBP18.23■□□□□ 0.51
RNF213-209ENST00000559864 TOPBP1Q92547 1522 aa18.06■□□□□ 0.48
RNF213-209ENST00000559864 DNMBPQ6XZF7 1577 aa18.04■□□□□ 0.48
RNF213-209ENST00000559864 IFT140Q96RY7 1462 aa17.98■□□□□ 0.47
RNF213-209ENST00000559864 ABCC8Q09428 1581 aa17.97■□□□□ 0.47
RNF213-209ENST00000559864 SUPT5HO00267 1087 aaKnown RBP17.96■□□□□ 0.47
RNF213-209ENST00000559864 ZNF608Q9ULD9 1512 aaPredicted RBP17.95■□□□□ 0.46
RNF213-209ENST00000559864 EIF4G3O43432 1585 aaKnown RBP17.92■□□□□ 0.46
RNF213-209ENST00000559864 TARBP1Q13395 1621 aaKnown RBP17.9■□□□□ 0.46
RNF213-209ENST00000559864 POLA1P09884 1462 aaPredicted RBP17.89■□□□□ 0.45
RNF213-209ENST00000559864 CUX1P39880 1505 aa17.86■□□□□ 0.45
RNF213-209ENST00000559864 FGD5Q6ZNL6 1462 aa17.82■□□□□ 0.44
RNF213-209ENST00000559864 RAD54L2Q9Y4B4 1467 aa17.81■□□□□ 0.44
RNF213-209ENST00000559864 AQRO60306 1485 aaKnown RBP eCLIP17.78■□□□□ 0.441e-12■■■■■ 35.7
RNF213-209ENST00000559864 WDR97A6NE52 1622 aa17.76■□□□□ 0.43
RNF213-209ENST00000559864 CHD1O14646 1710 aa17.75■□□□□ 0.43
RNF213-209ENST00000559864 SOGA1O94964 1423 aa17.74■□□□□ 0.43
RNF213-209ENST00000559864 OSCARQ8IYS5 282 aa17.72■□□□□ 0.43
RNF213-209ENST00000559864 TDRD9Q8NDG6 1382 aaKnown RBP17.69■□□□□ 0.42
RNF213-209ENST00000559864 SYNJ1O43426 1573 aa17.66■□□□□ 0.42
RNF213-209ENST00000559864 BIVM-ERCC5R4GMW8 1640 aa17.66■□□□□ 0.42
RNF213-209ENST00000559864 SNAPC4Q5SXM2 1469 aa17.66■□□□□ 0.42
RNF213-209ENST00000559864 PBRM1Q86U86 1689 aa17.65■□□□□ 0.42
RNF213-209ENST00000559864 TOP2BQ02880 1626 aa17.64■□□□□ 0.41
RNF213-209ENST00000559864 RIMBP3CA6NJZ7 1639 aa17.63■□□□□ 0.41
RNF213-209ENST00000559864 RIMBP3BA6NNM3 1639 aa17.63■□□□□ 0.41
RNF213-209ENST00000559864 ABCA5Q8WWZ7 1642 aa17.63■□□□□ 0.41
RNF213-209ENST00000559864 RIMBP3Q9UFD9 1639 aa17.63■□□□□ 0.41
RNF213-209ENST00000559864 ABCA10Q8WWZ4 1543 aa17.62■□□□□ 0.41
RNF213-209ENST00000559864 WRNQ14191 1432 aaPredicted RBP eCLIP17.61■□□□□ 0.41
RNF213-209ENST00000559864 TRIM41Q8WV44 630 aa17.6■□□□□ 0.41
RNF213-209ENST00000559864 GRIN2BQ13224 1484 aa17.6■□□□□ 0.41
RNF213-209ENST00000559864 MAGI1Q96QZ7 1491 aaPredicted RBP17.59■□□□□ 0.41
RNF213-209ENST00000559864 ARHGEF11O15085 1522 aa17.57■□□□□ 0.4
RNF213-209ENST00000559864 GAPVD1Q14C86 1478 aa17.56■□□□□ 0.4
RNF213-209ENST00000559864 FBLN2P98095 1184 aa17.55■□□□□ 0.4
RNF213-209ENST00000559864 SYNJ2O15056 1496 aa17.53■□□□□ 0.4
RNF213-209ENST00000559864 CLASP1Q7Z460 1538 aa17.52■□□□□ 0.4
RNF213-209ENST00000559864 ADAMTS12P58397 1594 aa17.49■□□□□ 0.39
RNF213-209ENST00000559864 CHMP7Q8WUX9 453 aaPredicted RBP17.45■□□□□ 0.38
RNF213-209ENST00000559864 ARAP1Q96P48 1450 aa17.44■□□□□ 0.38
RNF213-209ENST00000559864 ERICH3Q5RHP9 1530 aa17.41■□□□□ 0.38
RNF213-209ENST00000559864 GRIN2AQ12879 1464 aa17.4■□□□□ 0.38
RNF213-209ENST00000559864 CEP170Q5SW79 1584 aa17.36■□□□□ 0.37
RNF213-209ENST00000559864 FHAD1B1AJZ9 1412 aa17.35■□□□□ 0.37
RNF213-209ENST00000559864 NUP160Q12769 1436 aa17.32■□□□□ 0.36
RNF213-209ENST00000559864 CYB5RLQ6IPT4 315 aa17.31■□□□□ 0.36
RNF213-209ENST00000559864 ERCC6L2Q5T890 1561 aa17.28■□□□□ 0.36
RNF213-209ENST00000559864 SHROOM2Q13796 1616 aa17.27■□□□□ 0.36
RNF213-209ENST00000559864 RUSC2Q8N2Y8 1516 aa17.25■□□□□ 0.35
RNF213-209ENST00000559864 CUL7Q14999 1698 aa17.24■□□□□ 0.35
RNF213-209ENST00000559864 KIF27Q86VH2 1401 aa17.23■□□□□ 0.35
RNF213-209ENST00000559864 IGF1RP08069 1367 aa17.16■□□□□ 0.34
RNF213-209ENST00000559864 PRG4Q92954 1404 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms