RNA–Protein interactions for RNA: ENST00000559789.1

AMN-207, Transcript of amnion associated transmembrane protein, humanhuman

APPRIS ALT2 TSL 3

Gene AMN, Length 393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMN-207ENST00000559789 NISCHQ9Y2I1 1504 aa58.08■■■■■ 6.89
AMN-207ENST00000559789 CCDC180Q9P1Z9 1646 aa52■■■■■ 5.91
AMN-207ENST00000559789 ABCC9O60706 1549 aa51.36■■■■■ 5.81
AMN-207ENST00000559789 RB1CC1Q8TDY2 1594 aa49.17■■■■■ 5.46
AMN-207ENST00000559789 NACADO15069 1562 aa48.93■■■■■ 5.42
AMN-207ENST00000559789 DCAF8L2P0C7V8 631 aa48.76■■■■■ 5.4
AMN-207ENST00000559789 MYO15BQ96JP2 1530 aa48.37■■■■■ 5.33
AMN-207ENST00000559789 ZCCHC6Q5VYS8 1495 aaKnown RBP48.3■■■■■ 5.32
AMN-207ENST00000559789 UNC13AQ9UPW8 1703 aa48.15■■■■■ 5.3
AMN-207ENST00000559789 DCAF1Q9Y4B6 1507 aa47.99■■■■■ 5.27
AMN-207ENST00000559789 PABPN1Q86U42 306 aaKnown RBP eCLIP47.82■■■■■ 5.255e-8■■■■□ 23.3
AMN-207ENST00000559789 BICRAQ9NZM4 1560 aa47.66■■■■■ 5.22
AMN-207ENST00000559789 DNAJC5BQ9UF47 199 aa47.47■■■■■ 5.19
AMN-207ENST00000559789 SCRIBQ14160 1630 aa47.44■■■■■ 5.18
AMN-207ENST00000559789 SHROOM4Q9ULL8 1493 aa47.08■■■■■ 5.13
AMN-207ENST00000559789 EIF4G1Q04637 1599 aaKnown RBP46.48■■■■■ 5.03
AMN-207ENST00000559789 CC2D2AQ9P2K1 1620 aa46.45■■■■■ 5.03
AMN-207ENST00000559789 CECR2Q9BXF3 1484 aa46.18■■■■■ 4.98
AMN-207ENST00000559789 SMARCA4P51532 1647 aa45.27■■■■■ 4.84
AMN-207ENST00000559789 BAZ1AQ9NRL2 1556 aaPredicted RBP45.1■■■■■ 4.81
AMN-207ENST00000559789 NCAPD3P42695 1498 aa45.07■■■■■ 4.81
AMN-207ENST00000559789 ATAD2BQ9ULI0 1458 aa45.07■■■■■ 4.81
AMN-207ENST00000559789 SMARCA2P51531 1590 aa45.04■■■■■ 4.8
AMN-207ENST00000559789 HMGXB3Q12766 1538 aa44.91■■■■■ 4.78
AMN-207ENST00000559789 MROH2BQ7Z745 1585 aa44.77■■■■■ 4.76
AMN-207ENST00000559789 PEG3Q9GZU2 1588 aa44.76■■■■■ 4.76
AMN-207ENST00000559789 BAZ1BQ9UIG0 1483 aaKnown RBP44.74■■■■■ 4.75
AMN-207ENST00000559789 ERCC6Q03468 1493 aa44.34■■■■■ 4.69
AMN-207ENST00000559789 WIZO95785 1651 aa44.34■■■■■ 4.69
AMN-207ENST00000559789 NESP48681 1621 aa44.27■■■■■ 4.68
AMN-207ENST00000559789 LAMC3Q9Y6N6 1575 aa44.09■■■■■ 4.65
AMN-207ENST00000559789 RSF1Q96T23 1441 aaPredicted RBP44■■■■■ 4.63
AMN-207ENST00000559789 CUX2O14529 1486 aa44■■■■■ 4.63
AMN-207ENST00000559789 KIF21AQ7Z4S6 1674 aa43.84■■■■■ 4.61
AMN-207ENST00000559789 TOP2AP11388 1531 aaKnown RBP43.8■■■■■ 4.6
AMN-207ENST00000559789 THOC2Q8NI27 1593 aaKnown RBP43.78■■■■■ 4.6
AMN-207ENST00000559789 PDS5BQ9NTI5 1447 aa43.75■■■■■ 4.59
AMN-207ENST00000559789 CADPSQ9ULU8 1353 aa43.74■■■■■ 4.59
AMN-207ENST00000559789 CFTRP13569 1480 aa43.38■■■■■ 4.54
AMN-207ENST00000559789 MRC2Q9UBG0 1479 aa43.38■■■■■ 4.54
AMN-207ENST00000559789 CEP164Q9UPV0 1460 aa43.36■■■■■ 4.53
AMN-207ENST00000559789 FANCD2Q9BXW9 1451 aa43.32■■■■■ 4.53
AMN-207ENST00000559789 WDR62O43379 1518 aa43.27■■■■■ 4.52
AMN-207ENST00000559789 PRDM2Q13029 1718 aa43.25■■■■■ 4.51
AMN-207ENST00000559789 CCDC88BA6NC98 1476 aa43.22■■■■■ 4.51
AMN-207ENST00000559789 DNAJC5Q9H3Z4 198 aa43.17■■■■■ 4.5
AMN-207ENST00000559789 URB2Q14146 1524 aaKnown RBP42.92■■■■■ 4.46
AMN-207ENST00000559789 TOPBP1Q92547 1522 aa42.57■■■■■ 4.41
AMN-207ENST00000559789 SUPT5HO00267 1087 aaKnown RBP42.54■■■■■ 4.4
AMN-207ENST00000559789 DNMBPQ6XZF7 1577 aa42.52■■■■■ 4.4
AMN-207ENST00000559789 ABCC8Q09428 1581 aa42.49■■■■■ 4.39
AMN-207ENST00000559789 IFT140Q96RY7 1462 aa42.42■■■■■ 4.38
AMN-207ENST00000559789 ZNF608Q9ULD9 1512 aaPredicted RBP42.29■■■■■ 4.36
AMN-207ENST00000559789 EIF4G3O43432 1585 aaKnown RBP42.2■■■■■ 4.35
AMN-207ENST00000559789 POLA1P09884 1462 aaPredicted RBP42.17■■■■■ 4.34
AMN-207ENST00000559789 TARBP1Q13395 1621 aaKnown RBP42.17■■■■■ 4.34
AMN-207ENST00000559789 CUX1P39880 1505 aa42.06■■■■■ 4.32
AMN-207ENST00000559789 FGD5Q6ZNL6 1462 aa42.02■■■■■ 4.32
AMN-207ENST00000559789 RAD54L2Q9Y4B4 1467 aa41.99■■■■■ 4.31
AMN-207ENST00000559789 OSCARQ8IYS5 282 aa41.99■■■■■ 4.31
AMN-207ENST00000559789 AQRO60306 1485 aaKnown RBP eCLIP41.96■■■■■ 4.31
AMN-207ENST00000559789 SOGA1O94964 1423 aa41.95■■■■■ 4.31
AMN-207ENST00000559789 CHD1O14646 1710 aa41.82■■■■■ 4.29
AMN-207ENST00000559789 WDR97A6NE52 1622 aa41.8■■■■■ 4.28
AMN-207ENST00000559789 TDRD9Q8NDG6 1382 aaKnown RBP41.78■■■■■ 4.28
AMN-207ENST00000559789 TRIM41Q8WV44 630 aa41.67■■■■■ 4.26
AMN-207ENST00000559789 SNAPC4Q5SXM2 1469 aa41.62■■■■■ 4.25
AMN-207ENST00000559789 BIVM-ERCC5R4GMW8 1640 aa41.61■■■■■ 4.25
AMN-207ENST00000559789 PBRM1Q86U86 1689 aa41.59■■■■■ 4.25
AMN-207ENST00000559789 FBLN2P98095 1184 aa41.59■■■■■ 4.25
AMN-207ENST00000559789 TOP2BQ02880 1626 aa41.56■■■■■ 4.24
AMN-207ENST00000559789 WRNQ14191 1432 aaPredicted RBP eCLIP41.56■■■■■ 4.24
AMN-207ENST00000559789 RIMBP3CA6NJZ7 1639 aa41.55■■■■■ 4.24
AMN-207ENST00000559789 RIMBP3BA6NNM3 1639 aa41.55■■■■■ 4.24
AMN-207ENST00000559789 RIMBP3Q9UFD9 1639 aa41.55■■■■■ 4.24
AMN-207ENST00000559789 SYNJ1O43426 1573 aa41.55■■■■■ 4.24
AMN-207ENST00000559789 GRIN2BQ13224 1484 aa41.55■■■■■ 4.24
AMN-207ENST00000559789 ABCA10Q8WWZ4 1543 aa41.54■■■■■ 4.24
AMN-207ENST00000559789 MAGI1Q96QZ7 1491 aaPredicted RBP41.51■■■■■ 4.24
AMN-207ENST00000559789 ABCA5Q8WWZ7 1642 aa41.5■■■■■ 4.23
AMN-207ENST00000559789 GAPVD1Q14C86 1478 aa41.49■■■■■ 4.23
AMN-207ENST00000559789 ARHGEF11O15085 1522 aa41.44■■■■■ 4.22
AMN-207ENST00000559789 SYNJ2O15056 1496 aa41.35■■■■■ 4.21
AMN-207ENST00000559789 CHMP7Q8WUX9 453 aaPredicted RBP41.35■■■■■ 4.21
AMN-207ENST00000559789 CLASP1Q7Z460 1538 aa41.23■■■■■ 4.19
AMN-207ENST00000559789 ADAMTS12P58397 1594 aa41.16■■■■■ 4.18
AMN-207ENST00000559789 ARAP1Q96P48 1450 aa41.06■■■■■ 4.16
AMN-207ENST00000559789 ERICH3Q5RHP9 1530 aa41.05■■■■■ 4.16
AMN-207ENST00000559789 GRIN2AQ12879 1464 aa41.04■■■■■ 4.16
AMN-207ENST00000559789 CYB5RLQ6IPT4 315 aa41■■■■■ 4.15
AMN-207ENST00000559789 FHAD1B1AJZ9 1412 aa40.97■■■■■ 4.15
AMN-207ENST00000559789 CEP170Q5SW79 1584 aa40.9■■■■■ 4.14
AMN-207ENST00000559789 NUP160Q12769 1436 aa40.84■■■■■ 4.13
AMN-207ENST00000559789 KIF27Q86VH2 1401 aa40.73■■■■■ 4.11
AMN-207ENST00000559789 SHROOM2Q13796 1616 aa40.66■■■■■ 4.1
AMN-207ENST00000559789 CUL7Q14999 1698 aa40.66■■■■■ 4.1
AMN-207ENST00000559789 ERCC6L2Q5T890 1561 aa40.65■■■■■ 4.1
AMN-207ENST00000559789 RUSC2Q8N2Y8 1516 aa40.57■■■■■ 4.09
AMN-207ENST00000559789 IGF1RP08069 1367 aa40.54■■■■■ 4.08
AMN-207ENST00000559789 TRHP20396 242 aaPredicted RBP40.42■■■■■ 4.06
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms