RNA–Protein interactions for RNA: ENST00000559778.5

CPNE6-213, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-213ENST00000559778 NISCHQ9Y2I1 1504 aa41.1■■■■■ 4.17
CPNE6-213ENST00000559778 CCDC180Q9P1Z9 1646 aa37.03■■■■□ 3.52
CPNE6-213ENST00000559778 ABCC9O60706 1549 aa37.03■■■■□ 3.52
CPNE6-213ENST00000559778 RB1CC1Q8TDY2 1594 aa35.25■■■■□ 3.23
CPNE6-213ENST00000559778 NACADO15069 1562 aa34.93■■■■□ 3.18
CPNE6-213ENST00000559778 DNAJC5BQ9UF47 199 aa34.83■■■■□ 3.17
CPNE6-213ENST00000559778 UNC13AQ9UPW8 1703 aa34.65■■■■□ 3.14
CPNE6-213ENST00000559778 MYO15BQ96JP2 1530 aa34.45■■■■□ 3.11
CPNE6-213ENST00000559778 DCAF8L2P0C7V8 631 aa34.43■■■■□ 3.1
CPNE6-213ENST00000559778 PABPN1Q86U42 306 aaKnown RBP eCLIP34.31■■■■□ 3.08
CPNE6-213ENST00000559778 BICRAQ9NZM4 1560 aa34.26■■■■□ 3.07
CPNE6-213ENST00000559778 ZCCHC6Q5VYS8 1495 aaKnown RBP34.12■■■■□ 3.05
CPNE6-213ENST00000559778 DCAF1Q9Y4B6 1507 aa34.05■■■■□ 3.04
CPNE6-213ENST00000559778 SHROOM4Q9ULL8 1493 aa33.76■■■□□ 2.99
CPNE6-213ENST00000559778 SCRIBQ14160 1630 aa33.61■■■□□ 2.97
CPNE6-213ENST00000559778 CC2D2AQ9P2K1 1620 aa33.53■■■□□ 2.96
CPNE6-213ENST00000559778 EIF4G1Q04637 1599 aaKnown RBP33.4■■■□□ 2.94
CPNE6-213ENST00000559778 CECR2Q9BXF3 1484 aa33.37■■■□□ 2.93
CPNE6-213ENST00000559778 NCAPD3P42695 1498 aa32.18■■■□□ 2.74
CPNE6-213ENST00000559778 DNAJC5Q9H3Z4 198 aa32.16■■■□□ 2.74
CPNE6-213ENST00000559778 SMARCA4P51532 1647 aa32.08■■■□□ 2.73
CPNE6-213ENST00000559778 ATAD2BQ9ULI0 1458 aa32.06■■■□□ 2.72
CPNE6-213ENST00000559778 CUX2O14529 1486 aa32.05■■■□□ 2.72
CPNE6-213ENST00000559778 HMGXB3Q12766 1538 aa32.03■■■□□ 2.72
CPNE6-213ENST00000559778 SMARCA2P51531 1590 aa32.02■■■□□ 2.72
CPNE6-213ENST00000559778 ERCC6Q03468 1493 aa31.97■■■□□ 2.71
CPNE6-213ENST00000559778 BAZ1AQ9NRL2 1556 aaPredicted RBP31.94■■■□□ 2.7
CPNE6-213ENST00000559778 PEG3Q9GZU2 1588 aa31.81■■■□□ 2.68
CPNE6-213ENST00000559778 NESP48681 1621 aa31.76■■■□□ 2.67
CPNE6-213ENST00000559778 BAZ1BQ9UIG0 1483 aaKnown RBP31.75■■■□□ 2.67
CPNE6-213ENST00000559778 MROH2BQ7Z745 1585 aa31.63■■■□□ 2.65
CPNE6-213ENST00000559778 THOC2Q8NI27 1593 aaKnown RBP31.63■■■□□ 2.65
CPNE6-213ENST00000559778 LAMC3Q9Y6N6 1575 aa31.6■■■□□ 2.65
CPNE6-213ENST00000559778 KIF21AQ7Z4S6 1674 aa31.53■■■□□ 2.64
CPNE6-213ENST00000559778 WIZO95785 1651 aa31.32■■■□□ 2.6
CPNE6-213ENST00000559778 PDS5BQ9NTI5 1447 aa31.29■■■□□ 2.6
CPNE6-213ENST00000559778 CADPSQ9ULU8 1353 aa31.15■■■□□ 2.58
CPNE6-213ENST00000559778 MRC2Q9UBG0 1479 aa31.09■■■□□ 2.57
CPNE6-213ENST00000559778 WDR62O43379 1518 aa31.08■■■□□ 2.57
CPNE6-213ENST00000559778 RSF1Q96T23 1441 aaPredicted RBP31■■■□□ 2.55
CPNE6-213ENST00000559778 TOP2AP11388 1531 aaKnown RBP30.94■■■□□ 2.54
CPNE6-213ENST00000559778 CEP164Q9UPV0 1460 aa30.93■■■□□ 2.54
CPNE6-213ENST00000559778 FANCD2Q9BXW9 1451 aa30.84■■■□□ 2.53
CPNE6-213ENST00000559778 CFTRP13569 1480 aa30.81■■■□□ 2.52
CPNE6-213ENST00000559778 PRDM2Q13029 1718 aa30.77■■■□□ 2.52
CPNE6-213ENST00000559778 URB2Q14146 1524 aaKnown RBP30.63■■■□□ 2.49
CPNE6-213ENST00000559778 TRIM41Q8WV44 630 aa30.62■■■□□ 2.49
CPNE6-213ENST00000559778 CCDC88BA6NC98 1476 aa30.5■■■□□ 2.47
CPNE6-213ENST00000559778 OSCARQ8IYS5 282 aa30.4■■■□□ 2.46
CPNE6-213ENST00000559778 IFT140Q96RY7 1462 aa30.29■■■□□ 2.44
CPNE6-213ENST00000559778 TOPBP1Q92547 1522 aa30.27■■■□□ 2.44
CPNE6-213ENST00000559778 ZNF608Q9ULD9 1512 aaPredicted RBP30.27■■■□□ 2.44
CPNE6-213ENST00000559778 RIMBP3CA6NJZ7 1639 aa30.25■■■□□ 2.43
CPNE6-213ENST00000559778 RIMBP3BA6NNM3 1639 aa30.25■■■□□ 2.43
CPNE6-213ENST00000559778 RIMBP3Q9UFD9 1639 aa30.25■■■□□ 2.43
CPNE6-213ENST00000559778 EIF4G3O43432 1585 aaKnown RBP30.21■■■□□ 2.43
CPNE6-213ENST00000559778 ABCC8Q09428 1581 aa30.21■■■□□ 2.43
CPNE6-213ENST00000559778 DNMBPQ6XZF7 1577 aa30.19■■■□□ 2.42
CPNE6-213ENST00000559778 TARBP1Q13395 1621 aaKnown RBP30.1■■■□□ 2.41
CPNE6-213ENST00000559778 CHD1O14646 1710 aa30.1■■■□□ 2.41
CPNE6-213ENST00000559778 ARHGEF11O15085 1522 aa30.07■■■□□ 2.4
CPNE6-213ENST00000559778 POLA1P09884 1462 aaPredicted RBP29.94■■■□□ 2.38
CPNE6-213ENST00000559778 AQRO60306 1485 aaKnown RBP eCLIP29.92■■■□□ 2.38
CPNE6-213ENST00000559778 WDR97A6NE52 1622 aa29.8■■■□□ 2.36
CPNE6-213ENST00000559778 RAD54L2Q9Y4B4 1467 aa29.78■■■□□ 2.36
CPNE6-213ENST00000559778 ARAP1Q96P48 1450 aa29.74■■■□□ 2.35
CPNE6-213ENST00000559778 CUX1P39880 1505 aa29.72■■■□□ 2.35
CPNE6-213ENST00000559778 FGD5Q6ZNL6 1462 aa29.72■■■□□ 2.35
CPNE6-213ENST00000559778 SOGA1O94964 1423 aa29.71■■■□□ 2.35
CPNE6-213ENST00000559778 CYB5RLQ6IPT4 315 aa29.69■■■□□ 2.34
CPNE6-213ENST00000559778 TDRD9Q8NDG6 1382 aaKnown RBP29.66■■■□□ 2.34
CPNE6-213ENST00000559778 FBLN2P98095 1184 aa29.66■■■□□ 2.34
CPNE6-213ENST00000559778 SNAPC4Q5SXM2 1469 aa29.66■■■□□ 2.34
CPNE6-213ENST00000559778 CLASP1Q7Z460 1538 aa29.65■■■□□ 2.34
CPNE6-213ENST00000559778 PBRM1Q86U86 1689 aa29.61■■■□□ 2.33
CPNE6-213ENST00000559778 SUPT5HO00267 1087 aaKnown RBP29.6■■■□□ 2.33
CPNE6-213ENST00000559778 MAGI1Q96QZ7 1491 aaPredicted RBP29.6■■■□□ 2.33
CPNE6-213ENST00000559778 SYNJ1O43426 1573 aa29.59■■■□□ 2.33
CPNE6-213ENST00000559778 GRIN2BQ13224 1484 aa29.54■■■□□ 2.32
CPNE6-213ENST00000559778 SYNJ2O15056 1496 aa29.48■■■□□ 2.31
CPNE6-213ENST00000559778 ABCA5Q8WWZ7 1642 aa29.45■■■□□ 2.3
CPNE6-213ENST00000559778 CHMP7Q8WUX9 453 aaPredicted RBP29.43■■■□□ 2.3
CPNE6-213ENST00000559778 ABCA10Q8WWZ4 1543 aa29.43■■■□□ 2.3
CPNE6-213ENST00000559778 TRHP20396 242 aaPredicted RBP29.42■■■□□ 2.3
CPNE6-213ENST00000559778 BIVM-ERCC5R4GMW8 1640 aa29.42■■■□□ 2.3
CPNE6-213ENST00000559778 GAPVD1Q14C86 1478 aa29.4■■■□□ 2.3
CPNE6-213ENST00000559778 TOP2BQ02880 1626 aa29.37■■■□□ 2.29
CPNE6-213ENST00000559778 WRNQ14191 1432 aaPredicted RBP eCLIP29.29■■■□□ 2.28
CPNE6-213ENST00000559778 ADAMTS12P58397 1594 aa29.22■■■□□ 2.27
CPNE6-213ENST00000559778 GRIN2AQ12879 1464 aa29.19■■■□□ 2.26
CPNE6-213ENST00000559778 CEP170Q5SW79 1584 aa29.14■■■□□ 2.26
CPNE6-213ENST00000559778 ERCC6L2Q5T890 1561 aa29.14■■■□□ 2.26
CPNE6-213ENST00000559778 SHROOM2Q13796 1616 aa29.1■■■□□ 2.25
CPNE6-213ENST00000559778 ERICH3Q5RHP9 1530 aa29.1■■■□□ 2.25
CPNE6-213ENST00000559778 NUP160Q12769 1436 aa29.09■■■□□ 2.25
CPNE6-213ENST00000559778 FHAD1B1AJZ9 1412 aa29.03■■■□□ 2.24
CPNE6-213ENST00000559778 KIF13AQ9H1H9 1805 aa28.91■■■□□ 2.22
CPNE6-213ENST00000559778 RUSC2Q8N2Y8 1516 aa28.84■■■□□ 2.21
CPNE6-213ENST00000559778 PRG4Q92954 1404 aaPredicted RBP28.77■■■□□ 2.2
CPNE6-213ENST00000559778 CUL7Q14999 1698 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms