RNA–Protein interactions for RNA: ENST00000559757.1

RNF111-208, Transcript of ring finger protein 111, humanhuman

TSL 4

Gene RNF111, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-208ENST00000559757 NISCHQ9Y2I1 1504 aa41.45■■■■■ 4.23
RNF111-208ENST00000559757 CCDC180Q9P1Z9 1646 aa37■■■■□ 3.51
RNF111-208ENST00000559757 ABCC9O60706 1549 aa36.22■■■■□ 3.39
RNF111-208ENST00000559757 RB1CC1Q8TDY2 1594 aa34.87■■■■□ 3.17
RNF111-208ENST00000559757 NACADO15069 1562 aa34.79■■■■□ 3.16
RNF111-208ENST00000559757 DCAF8L2P0C7V8 631 aa34.62■■■■□ 3.13
RNF111-208ENST00000559757 MYO15BQ96JP2 1530 aa34.56■■■■□ 3.12
RNF111-208ENST00000559757 ZCCHC6Q5VYS8 1495 aaKnown RBP34.51■■■■□ 3.11
RNF111-208ENST00000559757 DCAF1Q9Y4B6 1507 aa34.35■■■■□ 3.09
RNF111-208ENST00000559757 UNC13AQ9UPW8 1703 aa34.06■■■■□ 3.04
RNF111-208ENST00000559757 PABPN1Q86U42 306 aaKnown RBP eCLIP33.77■■■■□ 3
RNF111-208ENST00000559757 BICRAQ9NZM4 1560 aa33.74■■■□□ 2.99
RNF111-208ENST00000559757 SCRIBQ14160 1630 aa33.66■■■□□ 2.98
RNF111-208ENST00000559757 SHROOM4Q9ULL8 1493 aa33.5■■■□□ 2.95
RNF111-208ENST00000559757 DNAJC5BQ9UF47 199 aa33.27■■■□□ 2.92
RNF111-208ENST00000559757 EIF4G1Q04637 1599 aaKnown RBP32.91■■■□□ 2.86
RNF111-208ENST00000559757 CC2D2AQ9P2K1 1620 aa32.8■■■□□ 2.84
RNF111-208ENST00000559757 CECR2Q9BXF3 1484 aa32.59■■■□□ 2.81
RNF111-208ENST00000559757 SMARCA4P51532 1647 aa32.21■■■□□ 2.75
RNF111-208ENST00000559757 BAZ1AQ9NRL2 1556 aaPredicted RBP32.19■■■□□ 2.74
RNF111-208ENST00000559757 NCAPD3P42695 1498 aa32.06■■■□□ 2.72
RNF111-208ENST00000559757 SMARCA2P51531 1590 aa32.06■■■□□ 2.72
RNF111-208ENST00000559757 ATAD2BQ9ULI0 1458 aa32.04■■■□□ 2.72
RNF111-208ENST00000559757 HMGXB3Q12766 1538 aa31.94■■■□□ 2.7
RNF111-208ENST00000559757 PEG3Q9GZU2 1588 aa31.92■■■□□ 2.7
RNF111-208ENST00000559757 MROH2BQ7Z745 1585 aa31.9■■■□□ 2.7
RNF111-208ENST00000559757 BAZ1BQ9UIG0 1483 aaKnown RBP31.8■■■□□ 2.68
RNF111-208ENST00000559757 WIZO95785 1651 aa31.57■■■□□ 2.65
RNF111-208ENST00000559757 RSF1Q96T23 1441 aaPredicted RBP31.49■■■□□ 2.63
RNF111-208ENST00000559757 LAMC3Q9Y6N6 1575 aa31.3■■■□□ 2.6
RNF111-208ENST00000559757 ERCC6Q03468 1493 aa31.29■■■□□ 2.6
RNF111-208ENST00000559757 NESP48681 1621 aa31.27■■■□□ 2.6
RNF111-208ENST00000559757 TOP2AP11388 1531 aaKnown RBP31.27■■■□□ 2.6
RNF111-208ENST00000559757 CADPSQ9ULU8 1353 aa31.11■■■□□ 2.57
RNF111-208ENST00000559757 PDS5BQ9NTI5 1447 aa31.07■■■□□ 2.56
RNF111-208ENST00000559757 CUX2O14529 1486 aa31.03■■■□□ 2.56
RNF111-208ENST00000559757 KIF21AQ7Z4S6 1674 aa30.98■■■□□ 2.55
RNF111-208ENST00000559757 THOC2Q8NI27 1593 aaKnown RBP30.91■■■□□ 2.54
RNF111-208ENST00000559757 CFTRP13569 1480 aa30.9■■■□□ 2.54
RNF111-208ENST00000559757 CCDC88BA6NC98 1476 aa30.85■■■□□ 2.53
RNF111-208ENST00000559757 FANCD2Q9BXW9 1451 aa30.76■■■□□ 2.52
RNF111-208ENST00000559757 CEP164Q9UPV0 1460 aa30.76■■■□□ 2.52
RNF111-208ENST00000559757 PRDM2Q13029 1718 aa30.76■■■□□ 2.51
RNF111-208ENST00000559757 MRC2Q9UBG0 1479 aa30.74■■■□□ 2.51
RNF111-208ENST00000559757 WDR62O43379 1518 aa30.65■■■□□ 2.5
RNF111-208ENST00000559757 SUPT5HO00267 1087 aaKnown RBP30.55■■■□□ 2.48
RNF111-208ENST00000559757 URB2Q14146 1524 aaKnown RBP30.43■■■□□ 2.46
RNF111-208ENST00000559757 ABCC8Q09428 1581 aa30.32■■■□□ 2.44
RNF111-208ENST00000559757 TOPBP1Q92547 1522 aa30.26■■■□□ 2.43
RNF111-208ENST00000559757 DNMBPQ6XZF7 1577 aa30.24■■■□□ 2.43
RNF111-208ENST00000559757 DNAJC5Q9H3Z4 198 aa30.17■■■□□ 2.42
RNF111-208ENST00000559757 IFT140Q96RY7 1462 aa30.12■■■□□ 2.41
RNF111-208ENST00000559757 POLA1P09884 1462 aaPredicted RBP29.98■■■□□ 2.39
RNF111-208ENST00000559757 CUX1P39880 1505 aa29.95■■■□□ 2.38
RNF111-208ENST00000559757 TARBP1Q13395 1621 aaKnown RBP29.94■■■□□ 2.38
RNF111-208ENST00000559757 ZNF608Q9ULD9 1512 aaPredicted RBP29.93■■■□□ 2.38
RNF111-208ENST00000559757 FGD5Q6ZNL6 1462 aa29.89■■■□□ 2.38
RNF111-208ENST00000559757 EIF4G3O43432 1585 aaKnown RBP29.88■■■□□ 2.37
RNF111-208ENST00000559757 SOGA1O94964 1423 aa29.86■■■□□ 2.37
RNF111-208ENST00000559757 RAD54L2Q9Y4B4 1467 aa29.81■■■□□ 2.36
RNF111-208ENST00000559757 WDR97A6NE52 1622 aa29.79■■■□□ 2.36
RNF111-208ENST00000559757 AQRO60306 1485 aaKnown RBP eCLIP29.74■■■□□ 2.35
RNF111-208ENST00000559757 WRNQ14191 1432 aaPredicted RBP eCLIP29.73■■■□□ 2.35
RNF111-208ENST00000559757 BIVM-ERCC5R4GMW8 1640 aa29.71■■■□□ 2.35
RNF111-208ENST00000559757 TOP2BQ02880 1626 aa29.7■■■□□ 2.34
RNF111-208ENST00000559757 OSCARQ8IYS5 282 aa29.67■■■□□ 2.34
RNF111-208ENST00000559757 TDRD9Q8NDG6 1382 aaKnown RBP29.66■■■□□ 2.34
RNF111-208ENST00000559757 SYNJ1O43426 1573 aa29.64■■■□□ 2.34
RNF111-208ENST00000559757 ABCA10Q8WWZ4 1543 aa29.61■■■□□ 2.33
RNF111-208ENST00000559757 GRIN2BQ13224 1484 aa29.55■■■□□ 2.32
RNF111-208ENST00000559757 CHD1O14646 1710 aa29.53■■■□□ 2.32
RNF111-208ENST00000559757 GAPVD1Q14C86 1478 aa29.52■■■□□ 2.32
RNF111-208ENST00000559757 ABCA5Q8WWZ7 1642 aa29.52■■■□□ 2.32
RNF111-208ENST00000559757 PBRM1Q86U86 1689 aa29.51■■■□□ 2.31
RNF111-208ENST00000559757 MAGI1Q96QZ7 1491 aaPredicted RBP29.51■■■□□ 2.31
RNF111-208ENST00000559757 SNAPC4Q5SXM2 1469 aa29.5■■■□□ 2.31
RNF111-208ENST00000559757 FBLN2P98095 1184 aa29.43■■■□□ 2.3
RNF111-208ENST00000559757 SYNJ2O15056 1496 aa29.38■■■□□ 2.29
RNF111-208ENST00000559757 CHMP7Q8WUX9 453 aaPredicted RBP29.35■■■□□ 2.29
RNF111-208ENST00000559757 ERICH3Q5RHP9 1530 aa29.29■■■□□ 2.28
RNF111-208ENST00000559757 ADAMTS12P58397 1594 aa29.25■■■□□ 2.27
RNF111-208ENST00000559757 RIMBP3CA6NJZ7 1639 aa29.22■■■□□ 2.27
RNF111-208ENST00000559757 RIMBP3BA6NNM3 1639 aa29.22■■■□□ 2.27
RNF111-208ENST00000559757 RIMBP3Q9UFD9 1639 aa29.22■■■□□ 2.27
RNF111-208ENST00000559757 ARHGEF11O15085 1522 aa29.2■■■□□ 2.27
RNF111-208ENST00000559757 CLASP1Q7Z460 1538 aa29.2■■■□□ 2.26
RNF111-208ENST00000559757 FHAD1B1AJZ9 1412 aa29.19■■■□□ 2.26
RNF111-208ENST00000559757 GRIN2AQ12879 1464 aa29.17■■■□□ 2.26
RNF111-208ENST00000559757 KIF27Q86VH2 1401 aa29.14■■■□□ 2.26
RNF111-208ENST00000559757 TRIM41Q8WV44 630 aa29.1■■■□□ 2.25
RNF111-208ENST00000559757 NUP160Q12769 1436 aa29.03■■■□□ 2.24
RNF111-208ENST00000559757 CUL7Q14999 1698 aa29.02■■■□□ 2.24
RNF111-208ENST00000559757 CEP170Q5SW79 1584 aa29.01■■■□□ 2.23
RNF111-208ENST00000559757 IGF1RP08069 1367 aa28.98■■■□□ 2.23
RNF111-208ENST00000559757 ARAP1Q96P48 1450 aa28.93■■■□□ 2.22
RNF111-208ENST00000559757 CYB5RLQ6IPT4 315 aa28.89■■■□□ 2.22
RNF111-208ENST00000559757 SHROOM2Q13796 1616 aa28.85■■■□□ 2.21
RNF111-208ENST00000559757 CARMIL1Q5VZK9 1371 aa28.83■■■□□ 2.21
RNF111-208ENST00000559757 RUSC2Q8N2Y8 1516 aa28.82■■■□□ 2.2
RNF111-208ENST00000559757 KIAA0586Q9BVV6 1533 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms