RNA–Protein interactions for RNA: ENST00000559663.1

CDK12-205, Transcript of cyclin dependent kinase 12, humanhuman

TSL 5

Gene CDK12, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-205ENST00000559663 NISCHQ9Y2I1 1504 aa20.72■□□□□ 0.91
CDK12-205ENST00000559663 ABCC9O60706 1549 aa18.85■□□□□ 0.61
CDK12-205ENST00000559663 CCDC180Q9P1Z9 1646 aa18.63■□□□□ 0.57
CDK12-205ENST00000559663 DNAJC5BQ9UF47 199 aa17.88■□□□□ 0.45
CDK12-205ENST00000559663 RB1CC1Q8TDY2 1594 aa17.85■□□□□ 0.45
CDK12-205ENST00000559663 NACADO15069 1562 aa17.7■□□□□ 0.42
CDK12-205ENST00000559663 DCAF8L2P0C7V8 631 aa17.53■□□□□ 0.4
CDK12-205ENST00000559663 PABPN1Q86U42 306 aaKnown RBP eCLIP17.53■□□□□ 0.4
CDK12-205ENST00000559663 MYO15BQ96JP2 1530 aa17.42■□□□□ 0.38
CDK12-205ENST00000559663 BICRAQ9NZM4 1560 aa17.34■□□□□ 0.37
CDK12-205ENST00000559663 UNC13AQ9UPW8 1703 aa17.33■□□□□ 0.37
CDK12-205ENST00000559663 ZCCHC6Q5VYS8 1495 aaKnown RBP17.15■□□□□ 0.34
CDK12-205ENST00000559663 SHROOM4Q9ULL8 1493 aa17.15■□□□□ 0.34
CDK12-205ENST00000559663 DCAF1Q9Y4B6 1507 aa17.12■□□□□ 0.33
CDK12-205ENST00000559663 CECR2Q9BXF3 1484 aa17.02■□□□□ 0.32
CDK12-205ENST00000559663 CC2D2AQ9P2K1 1620 aa16.99■□□□□ 0.31
CDK12-205ENST00000559663 SCRIBQ14160 1630 aa16.96■□□□□ 0.31
CDK12-205ENST00000559663 EIF4G1Q04637 1599 aaKnown RBP16.94■□□□□ 0.3
CDK12-205ENST00000559663 DNAJC5Q9H3Z4 198 aa16.57■□□□□ 0.24
CDK12-205ENST00000559663 NCAPD3P42695 1498 aa16.37■□□□□ 0.21
CDK12-205ENST00000559663 CUX2O14529 1486 aa16.35■□□□□ 0.21
CDK12-205ENST00000559663 ERCC6Q03468 1493 aa16.29■□□□□ 0.2
CDK12-205ENST00000559663 ATAD2BQ9ULI0 1458 aa16.29■□□□□ 0.2
CDK12-205ENST00000559663 HMGXB3Q12766 1538 aa16.21■□□□□ 0.19
CDK12-205ENST00000559663 SMARCA2P51531 1590 aa16.21■□□□□ 0.18
CDK12-205ENST00000559663 SMARCA4P51532 1647 aa16.17■□□□□ 0.18
CDK12-205ENST00000559663 NESP48681 1621 aa16.14■□□□□ 0.17
CDK12-205ENST00000559663 BAZ1BQ9UIG0 1483 aaKnown RBP16.1■□□□□ 0.17
CDK12-205ENST00000559663 BAZ1AQ9NRL2 1556 aaPredicted RBP16.09■□□□□ 0.17
CDK12-205ENST00000559663 PEG3Q9GZU2 1588 aa16.05■□□□□ 0.16
CDK12-205ENST00000559663 THOC2Q8NI27 1593 aaKnown RBP16■□□□□ 0.15
CDK12-205ENST00000559663 LAMC3Q9Y6N6 1575 aa15.99■□□□□ 0.15
CDK12-205ENST00000559663 MROH2BQ7Z745 1585 aa15.95■□□□□ 0.14
CDK12-205ENST00000559663 PDS5BQ9NTI5 1447 aa15.94■□□□□ 0.14
CDK12-205ENST00000559663 CADPSQ9ULU8 1353 aa15.86■□□□□ 0.13
CDK12-205ENST00000559663 KIF21AQ7Z4S6 1674 aa15.85■□□□□ 0.13
CDK12-205ENST00000559663 MRC2Q9UBG0 1479 aa15.8■□□□□ 0.12
CDK12-205ENST00000559663 WDR62O43379 1518 aa15.77■□□□□ 0.11
CDK12-205ENST00000559663 TRIM41Q8WV44 630 aa15.73■□□□□ 0.11
CDK12-205ENST00000559663 WIZO95785 1651 aa15.7■□□□□ 0.1
CDK12-205ENST00000559663 CEP164Q9UPV0 1460 aa15.7■□□□□ 0.1
CDK12-205ENST00000559663 FANCD2Q9BXW9 1451 aa15.66■□□□□ 0.1
CDK12-205ENST00000559663 CFTRP13569 1480 aa15.64■□□□□ 0.09
CDK12-205ENST00000559663 RSF1Q96T23 1441 aaPredicted RBP15.58■□□□□ 0.08
CDK12-205ENST00000559663 OSCARQ8IYS5 282 aa15.56■□□□□ 0.08
CDK12-205ENST00000559663 TOP2AP11388 1531 aaKnown RBP15.54■□□□□ 0.08
CDK12-205ENST00000559663 URB2Q14146 1524 aaKnown RBP15.54■□□□□ 0.08
CDK12-205ENST00000559663 IFT140Q96RY7 1462 aa15.4■□□□□ 0.06
CDK12-205ENST00000559663 ZNF608Q9ULD9 1512 aaPredicted RBP15.38■□□□□ 0.05
CDK12-205ENST00000559663 CCDC88BA6NC98 1476 aa15.37■□□□□ 0.05
CDK12-205ENST00000559663 RIMBP3CA6NJZ7 1639 aa15.35■□□□□ 0.05
CDK12-205ENST00000559663 RIMBP3BA6NNM3 1639 aa15.35■□□□□ 0.05
CDK12-205ENST00000559663 RIMBP3Q9UFD9 1639 aa15.35■□□□□ 0.05
CDK12-205ENST00000559663 TOPBP1Q92547 1522 aa15.33■□□□□ 0.05
CDK12-205ENST00000559663 PRDM2Q13029 1718 aa15.32■□□□□ 0.04
CDK12-205ENST00000559663 ARHGEF11O15085 1522 aa15.32■□□□□ 0.04
CDK12-205ENST00000559663 ABCC8Q09428 1581 aa15.3■□□□□ 0.04
CDK12-205ENST00000559663 EIF4G3O43432 1585 aaKnown RBP15.27■□□□□ 0.03
CDK12-205ENST00000559663 DNMBPQ6XZF7 1577 aa15.25■□□□□ 0.03
CDK12-205ENST00000559663 AQRO60306 1485 aaKnown RBP eCLIP15.21■□□□□ 0.03
CDK12-205ENST00000559663 CYB5RLQ6IPT4 315 aa15.2■□□□□ 0.02
CDK12-205ENST00000559663 TARBP1Q13395 1621 aaKnown RBP15.2■□□□□ 0.02
CDK12-205ENST00000559663 POLA1P09884 1462 aaPredicted RBP15.18■□□□□ 0.02
CDK12-205ENST00000559663 ARAP1Q96P48 1450 aa15.16■□□□□ 0.02
CDK12-205ENST00000559663 FBLN2P98095 1184 aa15.13■□□□□ 0.01
CDK12-205ENST00000559663 CHD1O14646 1710 aa15.12■□□□□ 0.01
CDK12-205ENST00000559663 RAD54L2Q9Y4B4 1467 aa15.12■□□□□ 0.01
CDK12-205ENST00000559663 TDRD9Q8NDG6 1382 aaKnown RBP15.1■□□□□ 0.01
CDK12-205ENST00000559663 SOGA1O94964 1423 aa15.09■□□□□ 0.01
CDK12-205ENST00000559663 TRHP20396 242 aaPredicted RBP15.08■□□□□ 0
CDK12-205ENST00000559663 SNAPC4Q5SXM2 1469 aa15.07■□□□□ 0
CDK12-205ENST00000559663 FGD5Q6ZNL6 1462 aa15.05■□□□□ -0
CDK12-205ENST00000559663 WDR97A6NE52 1622 aa15.05■□□□□ -0
CDK12-205ENST00000559663 CLASP1Q7Z460 1538 aa15.04■□□□□ -0
CDK12-205ENST00000559663 MAGI1Q96QZ7 1491 aaPredicted RBP15.01□□□□□ -0.01
CDK12-205ENST00000559663 CHMP7Q8WUX9 453 aaPredicted RBP15.01□□□□□ -0.01
CDK12-205ENST00000559663 CUX1P39880 1505 aa15□□□□□ -0.01
CDK12-205ENST00000559663 GRIN2BQ13224 1484 aa15□□□□□ -0.01
CDK12-205ENST00000559663 SYNJ1O43426 1573 aa14.99□□□□□ -0.01
CDK12-205ENST00000559663 SYNJ2O15056 1496 aa14.97□□□□□ -0.01
CDK12-205ENST00000559663 GAPVD1Q14C86 1478 aa14.91□□□□□ -0.02
CDK12-205ENST00000559663 ABCA10Q8WWZ4 1543 aa14.88□□□□□ -0.03
CDK12-205ENST00000559663 ABCA5Q8WWZ7 1642 aa14.84□□□□□ -0.03
CDK12-205ENST00000559663 PBRM1Q86U86 1689 aa14.84□□□□□ -0.03
CDK12-205ENST00000559663 GRIN2AQ12879 1464 aa14.81□□□□□ -0.04
CDK12-205ENST00000559663 NUP160Q12769 1436 aa14.78□□□□□ -0.04
CDK12-205ENST00000559663 WRNQ14191 1432 aaPredicted RBP eCLIP14.78□□□□□ -0.04
CDK12-205ENST00000559663 AEBP2Q6ZN18 517 aaPredicted RBP14.78□□□□□ -0.04
CDK12-205ENST00000559663 ERCC6L2Q5T890 1561 aa14.77□□□□□ -0.05
CDK12-205ENST00000559663 ADAMTS12P58397 1594 aa14.76□□□□□ -0.05
CDK12-205ENST00000559663 CEP170Q5SW79 1584 aa14.74□□□□□ -0.05
CDK12-205ENST00000559663 FHAD1B1AJZ9 1412 aa14.73□□□□□ -0.05
CDK12-205ENST00000559663 TOP2BQ02880 1626 aa14.7□□□□□ -0.06
CDK12-205ENST00000559663 SUPT5HO00267 1087 aaKnown RBP14.69□□□□□ -0.06
CDK12-205ENST00000559663 SHROOM2Q13796 1616 aa14.69□□□□□ -0.06
CDK12-205ENST00000559663 ERICH3Q5RHP9 1530 aa14.68□□□□□ -0.06
CDK12-205ENST00000559663 BIVM-ERCC5R4GMW8 1640 aa14.67□□□□□ -0.06
CDK12-205ENST00000559663 PRG4Q92954 1404 aaPredicted RBP14.63□□□□□ -0.07
CDK12-205ENST00000559663 JPH4Q96JJ6 628 aa14.61□□□□□ -0.07
CDK12-205ENST00000559663 RUSC2Q8N2Y8 1516 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms