RNA–Protein interactions for RNA: ENST00000559635.1

IPO4-210, Transcript of importin 4, humanhuman

TSL 3

Gene IPO4, Length 492 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-210ENST00000559635 NISCHQ9Y2I1 1504 aa34.01■■■■□ 3.04
IPO4-210ENST00000559635 CCDC180Q9P1Z9 1646 aa30.24■■■□□ 2.43
IPO4-210ENST00000559635 ABCC9O60706 1549 aa29.72■■■□□ 2.35
IPO4-210ENST00000559635 DCAF8L2P0C7V8 631 aa28.52■■■□□ 2.16
IPO4-210ENST00000559635 RB1CC1Q8TDY2 1594 aa28.47■■■□□ 2.15
IPO4-210ENST00000559635 NACADO15069 1562 aa28.38■■■□□ 2.13
IPO4-210ENST00000559635 ZCCHC6Q5VYS8 1495 aaKnown RBP28.34■■■□□ 2.13
IPO4-210ENST00000559635 MYO15BQ96JP2 1530 aa28.11■■■□□ 2.09
IPO4-210ENST00000559635 DCAF1Q9Y4B6 1507 aa28.03■■■□□ 2.08
IPO4-210ENST00000559635 UNC13AQ9UPW8 1703 aa27.98■■■□□ 2.07
IPO4-210ENST00000559635 PABPN1Q86U42 306 aaKnown RBP eCLIP27.77■■■□□ 2.04
IPO4-210ENST00000559635 SCRIBQ14160 1630 aa27.75■■■□□ 2.03
IPO4-210ENST00000559635 BICRAQ9NZM4 1560 aa27.67■■■□□ 2.02
IPO4-210ENST00000559635 DNAJC5BQ9UF47 199 aa27.26■■□□□ 1.95
IPO4-210ENST00000559635 SHROOM4Q9ULL8 1493 aa27.18■■□□□ 1.94
IPO4-210ENST00000559635 EIF4G1Q04637 1599 aaKnown RBP26.92■■□□□ 1.9
IPO4-210ENST00000559635 CC2D2AQ9P2K1 1620 aa26.85■■□□□ 1.89
IPO4-210ENST00000559635 CECR2Q9BXF3 1484 aa26.64■■□□□ 1.86
IPO4-210ENST00000559635 SMARCA4P51532 1647 aa26.45■■□□□ 1.82
IPO4-210ENST00000559635 BAZ1AQ9NRL2 1556 aaPredicted RBP26.35■■□□□ 1.81
IPO4-210ENST00000559635 MROH2BQ7Z745 1585 aa26.29■■□□□ 1.8
IPO4-210ENST00000559635 ATAD2BQ9ULI0 1458 aa26.26■■□□□ 1.79
IPO4-210ENST00000559635 SMARCA2P51531 1590 aa26.19■■□□□ 1.78
IPO4-210ENST00000559635 NCAPD3P42695 1498 aa26.17■■□□□ 1.78
IPO4-210ENST00000559635 HMGXB3Q12766 1538 aa26.09■■□□□ 1.77
IPO4-210ENST00000559635 PEG3Q9GZU2 1588 aa26.08■■□□□ 1.77
IPO4-210ENST00000559635 BAZ1BQ9UIG0 1483 aaKnown RBP26.07■■□□□ 1.76
IPO4-210ENST00000559635 WIZO95785 1651 aa26.05■■□□□ 1.76
IPO4-210ENST00000559635 RSF1Q96T23 1441 aaPredicted RBP25.92■■□□□ 1.74
IPO4-210ENST00000559635 NESP48681 1621 aa25.74■■□□□ 1.71
IPO4-210ENST00000559635 TOP2AP11388 1531 aaKnown RBP25.69■■□□□ 1.7
IPO4-210ENST00000559635 ERCC6Q03468 1493 aa25.58■■□□□ 1.69
IPO4-210ENST00000559635 LAMC3Q9Y6N6 1575 aa25.53■■□□□ 1.68
IPO4-210ENST00000559635 KIF21AQ7Z4S6 1674 aa25.45■■□□□ 1.66
IPO4-210ENST00000559635 CADPSQ9ULU8 1353 aa25.44■■□□□ 1.66
IPO4-210ENST00000559635 CCDC88BA6NC98 1476 aa25.39■■□□□ 1.65
IPO4-210ENST00000559635 SUPT5HO00267 1087 aaKnown RBP25.36■■□□□ 1.65
IPO4-210ENST00000559635 PDS5BQ9NTI5 1447 aa25.32■■□□□ 1.64
IPO4-210ENST00000559635 THOC2Q8NI27 1593 aaKnown RBP25.31■■□□□ 1.64
IPO4-210ENST00000559635 CFTRP13569 1480 aa25.29■■□□□ 1.64
IPO4-210ENST00000559635 FANCD2Q9BXW9 1451 aa25.21■■□□□ 1.63
IPO4-210ENST00000559635 CUX2O14529 1486 aa25.21■■□□□ 1.63
IPO4-210ENST00000559635 PRDM2Q13029 1718 aa25.2■■□□□ 1.62
IPO4-210ENST00000559635 CEP164Q9UPV0 1460 aa25.18■■□□□ 1.62
IPO4-210ENST00000559635 MRC2Q9UBG0 1479 aa25.14■■□□□ 1.61
IPO4-210ENST00000559635 WDR62O43379 1518 aa25.05■■□□□ 1.6
IPO4-210ENST00000559635 URB2Q14146 1524 aaKnown RBP25■■□□□ 1.59
IPO4-210ENST00000559635 TOPBP1Q92547 1522 aa24.82■■□□□ 1.56
IPO4-210ENST00000559635 DNMBPQ6XZF7 1577 aa24.78■■□□□ 1.56
IPO4-210ENST00000559635 ABCC8Q09428 1581 aa24.67■■□□□ 1.54
IPO4-210ENST00000559635 CUX1P39880 1505 aa24.66■■□□□ 1.54
IPO4-210ENST00000559635 POLA1P09884 1462 aaPredicted RBP24.61■■□□□ 1.53
IPO4-210ENST00000559635 IFT140Q96RY7 1462 aa24.61■■□□□ 1.53
IPO4-210ENST00000559635 ZNF608Q9ULD9 1512 aaPredicted RBP24.61■■□□□ 1.53
IPO4-210ENST00000559635 FGD5Q6ZNL6 1462 aa24.58■■□□□ 1.52
IPO4-210ENST00000559635 RAD54L2Q9Y4B4 1467 aa24.56■■□□□ 1.52
IPO4-210ENST00000559635 TARBP1Q13395 1621 aaKnown RBP24.55■■□□□ 1.52
IPO4-210ENST00000559635 EIF4G3O43432 1585 aaKnown RBP24.51■■□□□ 1.51
IPO4-210ENST00000559635 SYNJ1O43426 1573 aa24.48■■□□□ 1.51
IPO4-210ENST00000559635 SOGA1O94964 1423 aa24.47■■□□□ 1.51
IPO4-210ENST00000559635 WRNQ14191 1432 aaPredicted RBP eCLIP24.44■■□□□ 1.5
IPO4-210ENST00000559635 DNAJC5Q9H3Z4 198 aa24.44■■□□□ 1.5
IPO4-210ENST00000559635 AQRO60306 1485 aaKnown RBP eCLIP24.44■■□□□ 1.5
IPO4-210ENST00000559635 BIVM-ERCC5R4GMW8 1640 aa24.42■■□□□ 1.5
IPO4-210ENST00000559635 TOP2BQ02880 1626 aa24.4■■□□□ 1.5
IPO4-210ENST00000559635 TDRD9Q8NDG6 1382 aaKnown RBP24.4■■□□□ 1.5
IPO4-210ENST00000559635 WDR97A6NE52 1622 aa24.39■■□□□ 1.5
IPO4-210ENST00000559635 ABCA10Q8WWZ4 1543 aa24.26■■□□□ 1.47
IPO4-210ENST00000559635 PBRM1Q86U86 1689 aa24.25■■□□□ 1.47
IPO4-210ENST00000559635 CHD1O14646 1710 aa24.25■■□□□ 1.47
IPO4-210ENST00000559635 SNAPC4Q5SXM2 1469 aa24.23■■□□□ 1.47
IPO4-210ENST00000559635 ABCA5Q8WWZ7 1642 aa24.23■■□□□ 1.47
IPO4-210ENST00000559635 GAPVD1Q14C86 1478 aa24.19■■□□□ 1.46
IPO4-210ENST00000559635 GRIN2BQ13224 1484 aa24.18■■□□□ 1.46
IPO4-210ENST00000559635 FBLN2P98095 1184 aa24.17■■□□□ 1.46
IPO4-210ENST00000559635 OSCARQ8IYS5 282 aa24.14■■□□□ 1.45
IPO4-210ENST00000559635 MAGI1Q96QZ7 1491 aaPredicted RBP24.09■■□□□ 1.45
IPO4-210ENST00000559635 SYNJ2O15056 1496 aa24.02■■□□□ 1.44
IPO4-210ENST00000559635 ADAMTS12P58397 1594 aa24.02■■□□□ 1.44
IPO4-210ENST00000559635 CHMP7Q8WUX9 453 aaPredicted RBP24.01■■□□□ 1.43
IPO4-210ENST00000559635 ERICH3Q5RHP9 1530 aa23.95■■□□□ 1.43
IPO4-210ENST00000559635 RIMBP3CA6NJZ7 1639 aa23.91■■□□□ 1.42
IPO4-210ENST00000559635 RIMBP3BA6NNM3 1639 aa23.91■■□□□ 1.42
IPO4-210ENST00000559635 RIMBP3Q9UFD9 1639 aa23.91■■□□□ 1.42
IPO4-210ENST00000559635 GRIN2AQ12879 1464 aa23.9■■□□□ 1.42
IPO4-210ENST00000559635 KIF27Q86VH2 1401 aa23.9■■□□□ 1.42
IPO4-210ENST00000559635 CLASP1Q7Z460 1538 aa23.89■■□□□ 1.42
IPO4-210ENST00000559635 FHAD1B1AJZ9 1412 aa23.89■■□□□ 1.41
IPO4-210ENST00000559635 ARHGEF11O15085 1522 aa23.86■■□□□ 1.41
IPO4-210ENST00000559635 TRIM41Q8WV44 630 aa23.85■■□□□ 1.41
IPO4-210ENST00000559635 CEP170Q5SW79 1584 aa23.84■■□□□ 1.41
IPO4-210ENST00000559635 RUSC2Q8N2Y8 1516 aa23.82■■□□□ 1.4
IPO4-210ENST00000559635 IGF1RP08069 1367 aa23.8■■□□□ 1.4
IPO4-210ENST00000559635 CUL7Q14999 1698 aa23.78■■□□□ 1.4
IPO4-210ENST00000559635 NUP160Q12769 1436 aa23.76■■□□□ 1.39
IPO4-210ENST00000559635 ARAP1Q96P48 1450 aa23.69■■□□□ 1.38
IPO4-210ENST00000559635 CARMIL1Q5VZK9 1371 aa23.67■■□□□ 1.38
IPO4-210ENST00000559635 ERCC6L2Q5T890 1561 aa23.67■■□□□ 1.38
IPO4-210ENST00000559635 CYB5RLQ6IPT4 315 aa23.63■■□□□ 1.37
IPO4-210ENST00000559635 SHROOM2Q13796 1616 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms