RNA–Protein interactions for RNA: ENST00000559583.1

RNF31-217, Transcript of ring finger protein 31, humanhuman

TSL 4

Gene RNF31, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31-217ENST00000559583 NISCHQ9Y2I1 1504 aa31.89■■■□□ 2.7
RNF31-217ENST00000559583 CCDC180Q9P1Z9 1646 aa28.54■■■□□ 2.16
RNF31-217ENST00000559583 ABCC9O60706 1549 aa28.38■■■□□ 2.13
RNF31-217ENST00000559583 RB1CC1Q8TDY2 1594 aa27.1■■□□□ 1.93
RNF31-217ENST00000559583 NACADO15069 1562 aa26.96■■□□□ 1.91
RNF31-217ENST00000559583 DCAF8L2P0C7V8 631 aa26.92■■□□□ 1.9
RNF31-217ENST00000559583 MYO15BQ96JP2 1530 aa26.63■■□□□ 1.85
RNF31-217ENST00000559583 UNC13AQ9UPW8 1703 aa26.48■■□□□ 1.83
RNF31-217ENST00000559583 PABPN1Q86U42 306 aaKnown RBP eCLIP26.47■■□□□ 1.83
RNF31-217ENST00000559583 DNAJC5BQ9UF47 199 aa26.46■■□□□ 1.83
RNF31-217ENST00000559583 ZCCHC6Q5VYS8 1495 aaKnown RBP26.44■■□□□ 1.82
RNF31-217ENST00000559583 DCAF1Q9Y4B6 1507 aa26.35■■□□□ 1.81
RNF31-217ENST00000559583 BICRAQ9NZM4 1560 aa26.27■■□□□ 1.8
RNF31-217ENST00000559583 SCRIBQ14160 1630 aa26.02■■□□□ 1.76
RNF31-217ENST00000559583 SHROOM4Q9ULL8 1493 aa25.96■■□□□ 1.75
RNF31-217ENST00000559583 CC2D2AQ9P2K1 1620 aa25.65■■□□□ 1.7
RNF31-217ENST00000559583 EIF4G1Q04637 1599 aaKnown RBP25.63■■□□□ 1.69
RNF31-217ENST00000559583 CECR2Q9BXF3 1484 aa25.55■■□□□ 1.68
RNF31-217ENST00000559583 NCAPD3P42695 1498 aa24.88■■□□□ 1.57
RNF31-217ENST00000559583 SMARCA4P51532 1647 aa24.83■■□□□ 1.57
RNF31-217ENST00000559583 ATAD2BQ9ULI0 1458 aa24.82■■□□□ 1.56
RNF31-217ENST00000559583 SMARCA2P51531 1590 aa24.78■■□□□ 1.56
RNF31-217ENST00000559583 BAZ1AQ9NRL2 1556 aaPredicted RBP24.76■■□□□ 1.55
RNF31-217ENST00000559583 HMGXB3Q12766 1538 aa24.7■■□□□ 1.54
RNF31-217ENST00000559583 BAZ1BQ9UIG0 1483 aaKnown RBP24.6■■□□□ 1.53
RNF31-217ENST00000559583 PEG3Q9GZU2 1588 aa24.59■■□□□ 1.53
RNF31-217ENST00000559583 MROH2BQ7Z745 1585 aa24.56■■□□□ 1.52
RNF31-217ENST00000559583 ERCC6Q03468 1493 aa24.51■■□□□ 1.51
RNF31-217ENST00000559583 NESP48681 1621 aa24.42■■□□□ 1.5
RNF31-217ENST00000559583 CUX2O14529 1486 aa24.39■■□□□ 1.5
RNF31-217ENST00000559583 LAMC3Q9Y6N6 1575 aa24.3■■□□□ 1.48
RNF31-217ENST00000559583 WIZO95785 1651 aa24.29■■□□□ 1.48
RNF31-217ENST00000559583 DNAJC5Q9H3Z4 198 aa24.21■■□□□ 1.47
RNF31-217ENST00000559583 PDS5BQ9NTI5 1447 aa24.18■■□□□ 1.46
RNF31-217ENST00000559583 CADPSQ9ULU8 1353 aa24.14■■□□□ 1.45
RNF31-217ENST00000559583 THOC2Q8NI27 1593 aaKnown RBP24.12■■□□□ 1.45
RNF31-217ENST00000559583 KIF21AQ7Z4S6 1674 aa24.12■■□□□ 1.45
RNF31-217ENST00000559583 RSF1Q96T23 1441 aaPredicted RBP24.12■■□□□ 1.45
RNF31-217ENST00000559583 TOP2AP11388 1531 aaKnown RBP23.99■■□□□ 1.43
RNF31-217ENST00000559583 MRC2Q9UBG0 1479 aa23.92■■□□□ 1.42
RNF31-217ENST00000559583 CFTRP13569 1480 aa23.88■■□□□ 1.41
RNF31-217ENST00000559583 CEP164Q9UPV0 1460 aa23.87■■□□□ 1.41
RNF31-217ENST00000559583 FANCD2Q9BXW9 1451 aa23.86■■□□□ 1.41
RNF31-217ENST00000559583 WDR62O43379 1518 aa23.84■■□□□ 1.41
RNF31-217ENST00000559583 CCDC88BA6NC98 1476 aa23.73■■□□□ 1.39
RNF31-217ENST00000559583 PRDM2Q13029 1718 aa23.67■■□□□ 1.38
RNF31-217ENST00000559583 URB2Q14146 1524 aaKnown RBP23.64■■□□□ 1.37
RNF31-217ENST00000559583 ABCC8Q09428 1581 aa23.42■■□□□ 1.34
RNF31-217ENST00000559583 TOPBP1Q92547 1522 aa23.42■■□□□ 1.34
RNF31-217ENST00000559583 IFT140Q96RY7 1462 aa23.39■■□□□ 1.34
RNF31-217ENST00000559583 OSCARQ8IYS5 282 aa23.36■■□□□ 1.33
RNF31-217ENST00000559583 DNMBPQ6XZF7 1577 aa23.35■■□□□ 1.33
RNF31-217ENST00000559583 ZNF608Q9ULD9 1512 aaPredicted RBP23.31■■□□□ 1.32
RNF31-217ENST00000559583 SUPT5HO00267 1087 aaKnown RBP23.23■■□□□ 1.31
RNF31-217ENST00000559583 TRIM41Q8WV44 630 aa23.23■■□□□ 1.31
RNF31-217ENST00000559583 EIF4G3O43432 1585 aaKnown RBP23.2■■□□□ 1.3
RNF31-217ENST00000559583 TARBP1Q13395 1621 aaKnown RBP23.19■■□□□ 1.3
RNF31-217ENST00000559583 POLA1P09884 1462 aaPredicted RBP23.18■■□□□ 1.3
RNF31-217ENST00000559583 AQRO60306 1485 aaKnown RBP eCLIP23.14■■□□□ 1.298e-7■■■■■ 28
RNF31-217ENST00000559583 SOGA1O94964 1423 aa23.12■■□□□ 1.29
RNF31-217ENST00000559583 RAD54L2Q9Y4B4 1467 aa23.1■■□□□ 1.29
RNF31-217ENST00000559583 FGD5Q6ZNL6 1462 aa23.07■■□□□ 1.28
RNF31-217ENST00000559583 CUX1P39880 1505 aa23.07■■□□□ 1.28
RNF31-217ENST00000559583 TDRD9Q8NDG6 1382 aaKnown RBP23.03■■□□□ 1.28
RNF31-217ENST00000559583 FBLN2P98095 1184 aa23.01■■□□□ 1.27
RNF31-217ENST00000559583 CHD1O14646 1710 aa23■■□□□ 1.27
RNF31-217ENST00000559583 WDR97A6NE52 1622 aa22.99■■□□□ 1.27
RNF31-217ENST00000559583 RIMBP3CA6NJZ7 1639 aa22.98■■□□□ 1.27
RNF31-217ENST00000559583 RIMBP3BA6NNM3 1639 aa22.98■■□□□ 1.27
RNF31-217ENST00000559583 RIMBP3Q9UFD9 1639 aa22.98■■□□□ 1.27
RNF31-217ENST00000559583 ARHGEF11O15085 1522 aa22.92■■□□□ 1.26
RNF31-217ENST00000559583 SNAPC4Q5SXM2 1469 aa22.91■■□□□ 1.26
RNF31-217ENST00000559583 GRIN2BQ13224 1484 aa22.88■■□□□ 1.25
RNF31-217ENST00000559583 CHMP7Q8WUX9 453 aaPredicted RBP22.87■■□□□ 1.25
RNF31-217ENST00000559583 MAGI1Q96QZ7 1491 aaPredicted RBP22.86■■□□□ 1.25
RNF31-217ENST00000559583 GAPVD1Q14C86 1478 aa22.83■■□□□ 1.25
RNF31-217ENST00000559583 ABCA10Q8WWZ4 1543 aa22.82■■□□□ 1.24
RNF31-217ENST00000559583 PBRM1Q86U86 1689 aa22.8■■□□□ 1.24
RNF31-217ENST00000559583 CYB5RLQ6IPT4 315 aa22.79■■□□□ 1.24
RNF31-217ENST00000559583 WRNQ14191 1432 aaPredicted RBP eCLIP22.79■■□□□ 1.24
RNF31-217ENST00000559583 SYNJ2O15056 1496 aa22.79■■□□□ 1.24
RNF31-217ENST00000559583 SYNJ1O43426 1573 aa22.76■■□□□ 1.23
RNF31-217ENST00000559583 TOP2BQ02880 1626 aa22.76■■□□□ 1.23
RNF31-217ENST00000559583 ABCA5Q8WWZ7 1642 aa22.75■■□□□ 1.23
RNF31-217ENST00000559583 BIVM-ERCC5R4GMW8 1640 aa22.75■■□□□ 1.23
RNF31-217ENST00000559583 CLASP1Q7Z460 1538 aa22.72■■□□□ 1.23
RNF31-217ENST00000559583 ARAP1Q96P48 1450 aa22.7■■□□□ 1.22
RNF31-217ENST00000559583 GRIN2AQ12879 1464 aa22.58■■□□□ 1.2
RNF31-217ENST00000559583 ADAMTS12P58397 1594 aa22.57■■□□□ 1.2
RNF31-217ENST00000559583 ERICH3Q5RHP9 1530 aa22.55■■□□□ 1.2
RNF31-217ENST00000559583 FHAD1B1AJZ9 1412 aa22.55■■□□□ 1.2
RNF31-217ENST00000559583 TRHP20396 242 aaPredicted RBP22.51■■□□□ 1.19
RNF31-217ENST00000559583 NUP160Q12769 1436 aa22.48■■□□□ 1.19
RNF31-217ENST00000559583 CEP170Q5SW79 1584 aa22.48■■□□□ 1.19
RNF31-217ENST00000559583 ERCC6L2Q5T890 1561 aa22.38■■□□□ 1.17
RNF31-217ENST00000559583 SHROOM2Q13796 1616 aa22.37■■□□□ 1.17
RNF31-217ENST00000559583 KIF27Q86VH2 1401 aa22.34■■□□□ 1.17
RNF31-217ENST00000559583 JPH4Q96JJ6 628 aa22.31■■□□□ 1.16
RNF31-217ENST00000559583 IGF1RP08069 1367 aa22.3■■□□□ 1.16
RNF31-217ENST00000559583 PRG4Q92954 1404 aaPredicted RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms