RNA–Protein interactions for RNA: ENST00000559571.1

NIPA2-206, Transcript of NIPA magnesium transporter 2, humanhuman

TSL 3

Gene NIPA2, Length 673 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPA2-206ENST00000559571 NISCHQ9Y2I1 1504 aa54.65■■■■■ 6.34
NIPA2-206ENST00000559571 CCDC180Q9P1Z9 1646 aa48.9■■■■■ 5.42
NIPA2-206ENST00000559571 ABCC9O60706 1549 aa48.21■■■■■ 5.31
NIPA2-206ENST00000559571 RB1CC1Q8TDY2 1594 aa46.25■■■■■ 4.99
NIPA2-206ENST00000559571 NACADO15069 1562 aa46.05■■■■■ 4.96
NIPA2-206ENST00000559571 DCAF8L2P0C7V8 631 aa45.9■■■■■ 4.94
NIPA2-206ENST00000559571 MYO15BQ96JP2 1530 aa45.58■■■■■ 4.89
NIPA2-206ENST00000559571 ZCCHC6Q5VYS8 1495 aaKnown RBP45.42■■■■■ 4.86
NIPA2-206ENST00000559571 DCAF1Q9Y4B6 1507 aa45.21■■■■■ 4.83
NIPA2-206ENST00000559571 UNC13AQ9UPW8 1703 aa45.2■■■■■ 4.83
NIPA2-206ENST00000559571 PABPN1Q86U42 306 aaKnown RBP eCLIP44.93■■■■■ 4.78
NIPA2-206ENST00000559571 BICRAQ9NZM4 1560 aa44.76■■■■■ 4.76
NIPA2-206ENST00000559571 DNAJC5BQ9UF47 199 aa44.55■■■■■ 4.72
NIPA2-206ENST00000559571 SCRIBQ14160 1630 aa44.53■■■■■ 4.72
NIPA2-206ENST00000559571 SHROOM4Q9ULL8 1493 aa44.34■■■■■ 4.69
NIPA2-206ENST00000559571 EIF4G1Q04637 1599 aaKnown RBP43.67■■■■■ 4.58
NIPA2-206ENST00000559571 CC2D2AQ9P2K1 1620 aa43.62■■■■■ 4.57
NIPA2-206ENST00000559571 CECR2Q9BXF3 1484 aa43.38■■■■■ 4.54
NIPA2-206ENST00000559571 SMARCA4P51532 1647 aa42.55■■■■■ 4.4
NIPA2-206ENST00000559571 BAZ1AQ9NRL2 1556 aaPredicted RBP42.45■■■■■ 4.39
NIPA2-206ENST00000559571 NCAPD3P42695 1498 aa42.43■■■■■ 4.38
NIPA2-206ENST00000559571 SMARCA2P51531 1590 aa42.39■■■■■ 4.38
NIPA2-206ENST00000559571 ATAD2BQ9ULI0 1458 aa42.38■■■■■ 4.38
NIPA2-206ENST00000559571 HMGXB3Q12766 1538 aa42.24■■■■■ 4.35
NIPA2-206ENST00000559571 PEG3Q9GZU2 1588 aa42.12■■■■■ 4.33
NIPA2-206ENST00000559571 MROH2BQ7Z745 1585 aa42.09■■■■■ 4.33
NIPA2-206ENST00000559571 BAZ1BQ9UIG0 1483 aaKnown RBP42.07■■■■■ 4.33
NIPA2-206ENST00000559571 ERCC6Q03468 1493 aa41.67■■■■■ 4.26
NIPA2-206ENST00000559571 WIZO95785 1651 aa41.66■■■■■ 4.26
NIPA2-206ENST00000559571 NESP48681 1621 aa41.55■■■■■ 4.24
NIPA2-206ENST00000559571 LAMC3Q9Y6N6 1575 aa41.47■■■■■ 4.23
NIPA2-206ENST00000559571 RSF1Q96T23 1441 aaPredicted RBP41.43■■■■■ 4.22
NIPA2-206ENST00000559571 CUX2O14529 1486 aa41.36■■■■■ 4.21
NIPA2-206ENST00000559571 PDS5BQ9NTI5 1447 aa41.19■■■■■ 4.18
NIPA2-206ENST00000559571 TOP2AP11388 1531 aaKnown RBP41.19■■■■■ 4.18
NIPA2-206ENST00000559571 CADPSQ9ULU8 1353 aa41.18■■■■■ 4.18
NIPA2-206ENST00000559571 KIF21AQ7Z4S6 1674 aa41.14■■■■■ 4.18
NIPA2-206ENST00000559571 THOC2Q8NI27 1593 aaKnown RBP41.08■■■■■ 4.17
NIPA2-206ENST00000559571 CFTRP13569 1480 aa40.83■■■■■ 4.13
NIPA2-206ENST00000559571 MRC2Q9UBG0 1479 aa40.78■■■■■ 4.12
NIPA2-206ENST00000559571 CEP164Q9UPV0 1460 aa40.77■■■■■ 4.12
NIPA2-206ENST00000559571 FANCD2Q9BXW9 1451 aa40.74■■■■■ 4.11
NIPA2-206ENST00000559571 CCDC88BA6NC98 1476 aa40.67■■■■■ 4.1
NIPA2-206ENST00000559571 WDR62O43379 1518 aa40.66■■■■■ 4.1
NIPA2-206ENST00000559571 PRDM2Q13029 1718 aa40.64■■■■■ 4.1
NIPA2-206ENST00000559571 DNAJC5Q9H3Z4 198 aa40.58■■■■■ 4.09
NIPA2-206ENST00000559571 URB2Q14146 1524 aaKnown RBP40.32■■■■■ 4.05
NIPA2-206ENST00000559571 SUPT5HO00267 1087 aaKnown RBP40.07■■■■■ 4.01
NIPA2-206ENST00000559571 ABCC8Q09428 1581 aa40.06■■■■■ 4
NIPA2-206ENST00000559571 TOPBP1Q92547 1522 aa40.02■■■■■ 4
NIPA2-206ENST00000559571 DNMBPQ6XZF7 1577 aa39.97■■■■□ 3.99
NIPA2-206ENST00000559571 IFT140Q96RY7 1462 aa39.91■■■■□ 3.98
NIPA2-206ENST00000559571 ZNF608Q9ULD9 1512 aaPredicted RBP39.71■■■■□ 3.95
NIPA2-206ENST00000559571 POLA1P09884 1462 aaPredicted RBP39.64■■■■□ 3.94
NIPA2-206ENST00000559571 TARBP1Q13395 1621 aaKnown RBP39.63■■■■□ 3.93
NIPA2-206ENST00000559571 EIF4G3O43432 1585 aaKnown RBP39.62■■■■□ 3.93
NIPA2-206ENST00000559571 OSCARQ8IYS5 282 aa39.55■■■■□ 3.92
NIPA2-206ENST00000559571 CUX1P39880 1505 aa39.53■■■■□ 3.92
NIPA2-206ENST00000559571 FGD5Q6ZNL6 1462 aa39.49■■■■□ 3.91
NIPA2-206ENST00000559571 SOGA1O94964 1423 aa39.48■■■■□ 3.91
NIPA2-206ENST00000559571 RAD54L2Q9Y4B4 1467 aa39.45■■■■□ 3.91
NIPA2-206ENST00000559571 AQRO60306 1485 aaKnown RBP eCLIP39.43■■■■□ 3.9
NIPA2-206ENST00000559571 WDR97A6NE52 1622 aa39.36■■■■□ 3.89
NIPA2-206ENST00000559571 TDRD9Q8NDG6 1382 aaKnown RBP39.29■■■■□ 3.88
NIPA2-206ENST00000559571 CHD1O14646 1710 aa39.24■■■■□ 3.87
NIPA2-206ENST00000559571 FBLN2P98095 1184 aa39.13■■■■□ 3.85
NIPA2-206ENST00000559571 BIVM-ERCC5R4GMW8 1640 aa39.13■■■■□ 3.85
NIPA2-206ENST00000559571 WRNQ14191 1432 aaPredicted RBP eCLIP39.13■■■■□ 3.85
NIPA2-206ENST00000559571 TOP2BQ02880 1626 aa39.11■■■■□ 3.85
NIPA2-206ENST00000559571 TRIM41Q8WV44 630 aa39.1■■■■□ 3.85
NIPA2-206ENST00000559571 GRIN2BQ13224 1484 aa39.1■■■■□ 3.85
NIPA2-206ENST00000559571 SNAPC4Q5SXM2 1469 aa39.1■■■■□ 3.85
NIPA2-206ENST00000559571 ABCA10Q8WWZ4 1543 aa39.08■■■■□ 3.85
NIPA2-206ENST00000559571 MAGI1Q96QZ7 1491 aaPredicted RBP39.06■■■■□ 3.84
NIPA2-206ENST00000559571 PBRM1Q86U86 1689 aa39.06■■■■□ 3.84
NIPA2-206ENST00000559571 SYNJ1O43426 1573 aa39.04■■■■□ 3.84
NIPA2-206ENST00000559571 GAPVD1Q14C86 1478 aa39.04■■■■□ 3.84
NIPA2-206ENST00000559571 RIMBP3CA6NJZ7 1639 aa38.99■■■■□ 3.83
NIPA2-206ENST00000559571 RIMBP3BA6NNM3 1639 aa38.99■■■■□ 3.83
NIPA2-206ENST00000559571 ABCA5Q8WWZ7 1642 aa38.99■■■■□ 3.83
NIPA2-206ENST00000559571 RIMBP3Q9UFD9 1639 aa38.99■■■■□ 3.83
NIPA2-206ENST00000559571 CHMP7Q8WUX9 453 aaPredicted RBP38.94■■■■□ 3.82
NIPA2-206ENST00000559571 ARHGEF11O15085 1522 aa38.91■■■■□ 3.82
NIPA2-206ENST00000559571 SYNJ2O15056 1496 aa38.9■■■■□ 3.82
NIPA2-206ENST00000559571 CLASP1Q7Z460 1538 aa38.73■■■■□ 3.79
NIPA2-206ENST00000559571 ADAMTS12P58397 1594 aa38.66■■■■□ 3.78
NIPA2-206ENST00000559571 ERICH3Q5RHP9 1530 aa38.64■■■■□ 3.78
NIPA2-206ENST00000559571 GRIN2AQ12879 1464 aa38.59■■■■□ 3.77
NIPA2-206ENST00000559571 FHAD1B1AJZ9 1412 aa38.56■■■■□ 3.76
NIPA2-206ENST00000559571 CYB5RLQ6IPT4 315 aa38.56■■■■□ 3.76
NIPA2-206ENST00000559571 ARAP1Q96P48 1450 aa38.53■■■■□ 3.76
NIPA2-206ENST00000559571 CEP170Q5SW79 1584 aa38.4■■■■□ 3.74
NIPA2-206ENST00000559571 NUP160Q12769 1436 aa38.4■■■■□ 3.74
NIPA2-206ENST00000559571 KIF27Q86VH2 1401 aa38.38■■■■□ 3.73
NIPA2-206ENST00000559571 CUL7Q14999 1698 aa38.25■■■■□ 3.71
NIPA2-206ENST00000559571 SHROOM2Q13796 1616 aa38.21■■■■□ 3.71
NIPA2-206ENST00000559571 IGF1RP08069 1367 aa38.19■■■■□ 3.7
NIPA2-206ENST00000559571 ERCC6L2Q5T890 1561 aa38.12■■■■□ 3.69
NIPA2-206ENST00000559571 RUSC2Q8N2Y8 1516 aa38.11■■■■□ 3.69
NIPA2-206ENST00000559571 JPH4Q96JJ6 628 aa38.01■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms