RNA–Protein interactions for RNA: ENST00000559538.1

MRPL46-204, Transcript of mitochondrial ribosomal protein L46, humanhuman

TSL 3

Gene MRPL46, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL46-204ENST00000559538 NISCHQ9Y2I1 1504 aa23.7■■□□□ 1.38
MRPL46-204ENST00000559538 ABCC9O60706 1549 aa21.59■■□□□ 1.05
MRPL46-204ENST00000559538 CCDC180Q9P1Z9 1646 aa21.38■■□□□ 1.01
MRPL46-204ENST00000559538 RB1CC1Q8TDY2 1594 aa20.46■□□□□ 0.87
MRPL46-204ENST00000559538 DNAJC5BQ9UF47 199 aa20.32■□□□□ 0.84
MRPL46-204ENST00000559538 NACADO15069 1562 aa20.23■□□□□ 0.83
MRPL46-204ENST00000559538 DCAF8L2P0C7V8 631 aa20.23■□□□□ 0.83
MRPL46-204ENST00000559538 PABPN1Q86U42 306 aaKnown RBP eCLIP20.06■□□□□ 0.8
MRPL46-204ENST00000559538 UNC13AQ9UPW8 1703 aa20.01■□□□□ 0.79
MRPL46-204ENST00000559538 MYO15BQ96JP2 1530 aa19.83■□□□□ 0.77
MRPL46-204ENST00000559538 BICRAQ9NZM4 1560 aa19.8■□□□□ 0.76
MRPL46-204ENST00000559538 ZCCHC6Q5VYS8 1495 aaKnown RBP19.6■□□□□ 0.73
MRPL46-204ENST00000559538 DCAF1Q9Y4B6 1507 aa19.52■□□□□ 0.72
MRPL46-204ENST00000559538 SCRIBQ14160 1630 aa19.52■□□□□ 0.72
MRPL46-204ENST00000559538 SHROOM4Q9ULL8 1493 aa19.5■□□□□ 0.71
MRPL46-204ENST00000559538 CC2D2AQ9P2K1 1620 aa19.47■□□□□ 0.71
MRPL46-204ENST00000559538 CECR2Q9BXF3 1484 aa19.44■□□□□ 0.7
MRPL46-204ENST00000559538 EIF4G1Q04637 1599 aaKnown RBP19.37■□□□□ 0.69
MRPL46-204ENST00000559538 DNAJC5Q9H3Z4 198 aa18.81■□□□□ 0.6
MRPL46-204ENST00000559538 ERCC6Q03468 1493 aa18.69■□□□□ 0.58
MRPL46-204ENST00000559538 NCAPD3P42695 1498 aa18.65■□□□□ 0.58
MRPL46-204ENST00000559538 CUX2O14529 1486 aa18.64■□□□□ 0.57
MRPL46-204ENST00000559538 ATAD2BQ9ULI0 1458 aa18.58■□□□□ 0.57
MRPL46-204ENST00000559538 SMARCA4P51532 1647 aa18.56■□□□□ 0.56
MRPL46-204ENST00000559538 SMARCA2P51531 1590 aa18.55■□□□□ 0.56
MRPL46-204ENST00000559538 HMGXB3Q12766 1538 aa18.52■□□□□ 0.56
MRPL46-204ENST00000559538 NESP48681 1621 aa18.47■□□□□ 0.55
MRPL46-204ENST00000559538 BAZ1BQ9UIG0 1483 aaKnown RBP18.46■□□□□ 0.54
MRPL46-204ENST00000559538 BAZ1AQ9NRL2 1556 aaPredicted RBP18.44■□□□□ 0.54
MRPL46-204ENST00000559538 PEG3Q9GZU2 1588 aa18.33■□□□□ 0.52
MRPL46-204ENST00000559538 THOC2Q8NI27 1593 aaKnown RBP18.31■□□□□ 0.52
MRPL46-204ENST00000559538 LAMC3Q9Y6N6 1575 aa18.31■□□□□ 0.52
MRPL46-204ENST00000559538 KIF21AQ7Z4S6 1674 aa18.28■□□□□ 0.52
MRPL46-204ENST00000559538 MROH2BQ7Z745 1585 aa18.26■□□□□ 0.51
MRPL46-204ENST00000559538 PDS5BQ9NTI5 1447 aa18.21■□□□□ 0.51
MRPL46-204ENST00000559538 CADPSQ9ULU8 1353 aa18.09■□□□□ 0.49
MRPL46-204ENST00000559538 WIZO95785 1651 aa18.09■□□□□ 0.49
MRPL46-204ENST00000559538 MRC2Q9UBG0 1479 aa18.07■□□□□ 0.48
MRPL46-204ENST00000559538 TRIM41Q8WV44 630 aa18.04■□□□□ 0.48
MRPL46-204ENST00000559538 WDR62O43379 1518 aa18■□□□□ 0.47
MRPL46-204ENST00000559538 CEP164Q9UPV0 1460 aa17.97■□□□□ 0.47
MRPL46-204ENST00000559538 FANCD2Q9BXW9 1451 aa17.93■□□□□ 0.46
MRPL46-204ENST00000559538 CFTRP13569 1480 aa17.84■□□□□ 0.45
MRPL46-204ENST00000559538 TOP2AP11388 1531 aaKnown RBP17.82■□□□□ 0.44
MRPL46-204ENST00000559538 RSF1Q96T23 1441 aaPredicted RBP17.81■□□□□ 0.44
MRPL46-204ENST00000559538 OSCARQ8IYS5 282 aa17.78■□□□□ 0.44
MRPL46-204ENST00000559538 URB2Q14146 1524 aaKnown RBP17.77■□□□□ 0.43
MRPL46-204ENST00000559538 PRDM2Q13029 1718 aa17.74■□□□□ 0.43
MRPL46-204ENST00000559538 CCDC88BA6NC98 1476 aa17.61■□□□□ 0.41
MRPL46-204ENST00000559538 IFT140Q96RY7 1462 aa17.59■□□□□ 0.41
MRPL46-204ENST00000559538 RIMBP3CA6NJZ7 1639 aa17.58■□□□□ 0.41
MRPL46-204ENST00000559538 RIMBP3BA6NNM3 1639 aa17.58■□□□□ 0.41
MRPL46-204ENST00000559538 RIMBP3Q9UFD9 1639 aa17.58■□□□□ 0.41
MRPL46-204ENST00000559538 ZNF608Q9ULD9 1512 aaPredicted RBP17.58■□□□□ 0.41
MRPL46-204ENST00000559538 TOPBP1Q92547 1522 aa17.55■□□□□ 0.4
MRPL46-204ENST00000559538 EIF4G3O43432 1585 aaKnown RBP17.52■□□□□ 0.39
MRPL46-204ENST00000559538 ABCC8Q09428 1581 aa17.5■□□□□ 0.39
MRPL46-204ENST00000559538 ARHGEF11O15085 1522 aa17.49■□□□□ 0.39
MRPL46-204ENST00000559538 DNMBPQ6XZF7 1577 aa17.49■□□□□ 0.39
MRPL46-204ENST00000559538 CHD1O14646 1710 aa17.45■□□□□ 0.38
MRPL46-204ENST00000559538 FBLN2P98095 1184 aa17.43■□□□□ 0.38
MRPL46-204ENST00000559538 AQRO60306 1485 aaKnown RBP eCLIP17.42■□□□□ 0.38
MRPL46-204ENST00000559538 TARBP1Q13395 1621 aaKnown RBP17.4■□□□□ 0.38
MRPL46-204ENST00000559538 CYB5RLQ6IPT4 315 aa17.4■□□□□ 0.38
MRPL46-204ENST00000559538 POLA1P09884 1462 aaPredicted RBP17.36■□□□□ 0.37
MRPL46-204ENST00000559538 TRHP20396 242 aaPredicted RBP17.34■□□□□ 0.37
MRPL46-204ENST00000559538 RAD54L2Q9Y4B4 1467 aa17.31■□□□□ 0.36
MRPL46-204ENST00000559538 SOGA1O94964 1423 aa17.3■□□□□ 0.36
MRPL46-204ENST00000559538 TDRD9Q8NDG6 1382 aaKnown RBP17.28■□□□□ 0.36
MRPL46-204ENST00000559538 ARAP1Q96P48 1450 aa17.28■□□□□ 0.36
MRPL46-204ENST00000559538 FGD5Q6ZNL6 1462 aa17.24■□□□□ 0.35
MRPL46-204ENST00000559538 SNAPC4Q5SXM2 1469 aa17.24■□□□□ 0.35
MRPL46-204ENST00000559538 CHMP7Q8WUX9 453 aaPredicted RBP17.22■□□□□ 0.35
MRPL46-204ENST00000559538 WDR97A6NE52 1622 aa17.21■□□□□ 0.35
MRPL46-204ENST00000559538 SYNJ1O43426 1573 aa17.19■□□□□ 0.34
MRPL46-204ENST00000559538 CUX1P39880 1505 aa17.17■□□□□ 0.34
MRPL46-204ENST00000559538 MAGI1Q96QZ7 1491 aaPredicted RBP17.17■□□□□ 0.34
MRPL46-204ENST00000559538 CLASP1Q7Z460 1538 aa17.16■□□□□ 0.34
MRPL46-204ENST00000559538 GRIN2BQ13224 1484 aa17.16■□□□□ 0.34
MRPL46-204ENST00000559538 PBRM1Q86U86 1689 aa17.14■□□□□ 0.33
MRPL46-204ENST00000559538 SYNJ2O15056 1496 aa17.12■□□□□ 0.33
MRPL46-204ENST00000559538 GAPVD1Q14C86 1478 aa17.08■□□□□ 0.32
MRPL46-204ENST00000559538 ABCA5Q8WWZ7 1642 aa17.02■□□□□ 0.31
MRPL46-204ENST00000559538 SUPT5HO00267 1087 aaKnown RBP17.01■□□□□ 0.31
MRPL46-204ENST00000559538 ABCA10Q8WWZ4 1543 aa17.01■□□□□ 0.31
MRPL46-204ENST00000559538 AEBP2Q6ZN18 517 aaPredicted RBP16.98■□□□□ 0.31
MRPL46-204ENST00000559538 GRIN2AQ12879 1464 aa16.94■□□□□ 0.3
MRPL46-204ENST00000559538 WRNQ14191 1432 aaPredicted RBP eCLIP16.94■□□□□ 0.3
MRPL46-204ENST00000559538 ADAMTS12P58397 1594 aa16.91■□□□□ 0.3
MRPL46-204ENST00000559538 ERCC6L2Q5T890 1561 aa16.91■□□□□ 0.3
MRPL46-204ENST00000559538 CEP170Q5SW79 1584 aa16.89■□□□□ 0.3
MRPL46-204ENST00000559538 BIVM-ERCC5R4GMW8 1640 aa16.88■□□□□ 0.29
MRPL46-204ENST00000559538 TOP2BQ02880 1626 aa16.87■□□□□ 0.29
MRPL46-204ENST00000559538 FHAD1B1AJZ9 1412 aa16.84■□□□□ 0.29
MRPL46-204ENST00000559538 NUP160Q12769 1436 aa16.84■□□□□ 0.29
MRPL46-204ENST00000559538 SHROOM2Q13796 1616 aa16.81■□□□□ 0.28
MRPL46-204ENST00000559538 ERICH3Q5RHP9 1530 aa16.8■□□□□ 0.28
MRPL46-204ENST00000559538 PRG4Q92954 1404 aaPredicted RBP16.76■□□□□ 0.27
MRPL46-204ENST00000559538 KIF13AQ9H1H9 1805 aa16.73■□□□□ 0.27
MRPL46-204ENST00000559538 JPH4Q96JJ6 628 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms