RNA–Protein interactions for RNA: ENST00000559529.1

LHX6-209, Transcript of LIM homeobox 6, humanhuman

TSL 4

Gene LHX6, Length 550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6-209ENST00000559529 NISCHQ9Y2I1 1504 aa36.55■■■■□ 3.44
LHX6-209ENST00000559529 CCDC180Q9P1Z9 1646 aa32.65■■■□□ 2.82
LHX6-209ENST00000559529 ABCC9O60706 1549 aa32.64■■■□□ 2.82
LHX6-209ENST00000559529 RB1CC1Q8TDY2 1594 aa31.08■■■□□ 2.57
LHX6-209ENST00000559529 NACADO15069 1562 aa30.88■■■□□ 2.53
LHX6-209ENST00000559529 DNAJC5BQ9UF47 199 aa30.86■■■□□ 2.53
LHX6-209ENST00000559529 ZCCHC6Q5VYS8 1495 aaKnown RBP30.65■■■□□ 2.5
LHX6-209ENST00000559529 MYO15BQ96JP2 1530 aa30.54■■■□□ 2.48
LHX6-209ENST00000559529 DCAF1Q9Y4B6 1507 aa30.42■■■□□ 2.46
LHX6-209ENST00000559529 UNC13AQ9UPW8 1703 aa30.4■■■□□ 2.46
LHX6-209ENST00000559529 PABPN1Q86U42 306 aaKnown RBP eCLIP30.29■■■□□ 2.44
LHX6-209ENST00000559529 BICRAQ9NZM4 1560 aa30.28■■■□□ 2.44
LHX6-209ENST00000559529 DCAF8L2P0C7V8 631 aa30.26■■■□□ 2.43
LHX6-209ENST00000559529 SHROOM4Q9ULL8 1493 aa29.93■■■□□ 2.38
LHX6-209ENST00000559529 SCRIBQ14160 1630 aa29.56■■■□□ 2.32
LHX6-209ENST00000559529 CC2D2AQ9P2K1 1620 aa29.56■■■□□ 2.32
LHX6-209ENST00000559529 EIF4G1Q04637 1599 aaKnown RBP29.48■■■□□ 2.31
LHX6-209ENST00000559529 CECR2Q9BXF3 1484 aa29.48■■■□□ 2.31
LHX6-209ENST00000559529 NCAPD3P42695 1498 aa28.54■■■□□ 2.16
LHX6-209ENST00000559529 DNAJC5Q9H3Z4 198 aa28.48■■■□□ 2.15
LHX6-209ENST00000559529 ATAD2BQ9ULI0 1458 aa28.38■■■□□ 2.13
LHX6-209ENST00000559529 CUX2O14529 1486 aa28.34■■■□□ 2.13
LHX6-209ENST00000559529 HMGXB3Q12766 1538 aa28.32■■■□□ 2.12
LHX6-209ENST00000559529 BAZ1AQ9NRL2 1556 aaPredicted RBP28.31■■■□□ 2.12
LHX6-209ENST00000559529 SMARCA4P51532 1647 aa28.29■■■□□ 2.12
LHX6-209ENST00000559529 SMARCA2P51531 1590 aa28.28■■■□□ 2.12
LHX6-209ENST00000559529 RSF1Q96T23 1441 aaPredicted RBP28.16■■■□□ 2.1
LHX6-209ENST00000559529 PEG3Q9GZU2 1588 aa28.15■■■□□ 2.1
LHX6-209ENST00000559529 ERCC6Q03468 1493 aa28.15■■■□□ 2.1
LHX6-209ENST00000559529 MROH2BQ7Z745 1585 aa28.11■■■□□ 2.09
LHX6-209ENST00000559529 NESP48681 1621 aa28.03■■■□□ 2.08
LHX6-209ENST00000559529 BAZ1BQ9UIG0 1483 aaKnown RBP28.02■■■□□ 2.08
LHX6-209ENST00000559529 SUPT5HO00267 1087 aaKnown RBP27.96■■■□□ 2.07
LHX6-209ENST00000559529 THOC2Q8NI27 1593 aaKnown RBP27.89■■■□□ 2.05
LHX6-209ENST00000559529 LAMC3Q9Y6N6 1575 aa27.88■■■□□ 2.05
LHX6-209ENST00000559529 WIZO95785 1651 aa27.83■■■□□ 2.05
LHX6-209ENST00000559529 TOP2AP11388 1531 aaKnown RBP27.69■■■□□ 2.02
LHX6-209ENST00000559529 KIF21AQ7Z4S6 1674 aa27.67■■■□□ 2.02
LHX6-209ENST00000559529 PDS5BQ9NTI5 1447 aa27.67■■■□□ 2.02
LHX6-209ENST00000559529 CADPSQ9ULU8 1353 aa27.59■■■□□ 2.01
LHX6-209ENST00000559529 WDR62O43379 1518 aa27.47■■□□□ 1.99
LHX6-209ENST00000559529 MRC2Q9UBG0 1479 aa27.46■■□□□ 1.99
LHX6-209ENST00000559529 CCDC88BA6NC98 1476 aa27.3■■□□□ 1.96
LHX6-209ENST00000559529 CFTRP13569 1480 aa27.29■■□□□ 1.96
LHX6-209ENST00000559529 CEP164Q9UPV0 1460 aa27.28■■□□□ 1.96
LHX6-209ENST00000559529 FANCD2Q9BXW9 1451 aa27.25■■□□□ 1.95
LHX6-209ENST00000559529 URB2Q14146 1524 aaKnown RBP27.08■■□□□ 1.93
LHX6-209ENST00000559529 PRDM2Q13029 1718 aa26.97■■□□□ 1.91
LHX6-209ENST00000559529 TRIM41Q8WV44 630 aa26.9■■□□□ 1.9
LHX6-209ENST00000559529 OSCARQ8IYS5 282 aa26.87■■□□□ 1.89
LHX6-209ENST00000559529 IFT140Q96RY7 1462 aa26.78■■□□□ 1.88
LHX6-209ENST00000559529 TOPBP1Q92547 1522 aa26.74■■□□□ 1.87
LHX6-209ENST00000559529 ZNF608Q9ULD9 1512 aaPredicted RBP26.74■■□□□ 1.87
LHX6-209ENST00000559529 CHIC1Q5VXU3 224 aa26.71■■□□□ 1.87
LHX6-209ENST00000559529 ABCC8Q09428 1581 aa26.67■■□□□ 1.86
LHX6-209ENST00000559529 DNMBPQ6XZF7 1577 aa26.63■■□□□ 1.85
LHX6-209ENST00000559529 RIMBP3CA6NJZ7 1639 aa26.62■■□□□ 1.85
LHX6-209ENST00000559529 RIMBP3BA6NNM3 1639 aa26.62■■□□□ 1.85
LHX6-209ENST00000559529 RIMBP3Q9UFD9 1639 aa26.62■■□□□ 1.85
LHX6-209ENST00000559529 EIF4G3O43432 1585 aaKnown RBP26.6■■□□□ 1.85
LHX6-209ENST00000559529 TARBP1Q13395 1621 aaKnown RBP26.57■■□□□ 1.84
LHX6-209ENST00000559529 ARHGEF11O15085 1522 aa26.54■■□□□ 1.84
LHX6-209ENST00000559529 WRNQ14191 1432 aaPredicted RBP eCLIP26.53■■□□□ 1.84
LHX6-209ENST00000559529 POLA1P09884 1462 aaPredicted RBP26.47■■□□□ 1.83
LHX6-209ENST00000559529 AQRO60306 1485 aaKnown RBP eCLIP26.42■■□□□ 1.82
LHX6-209ENST00000559529 TOP2BQ02880 1626 aa26.41■■□□□ 1.82
LHX6-209ENST00000559529 BIVM-ERCC5R4GMW8 1640 aa26.41■■□□□ 1.82
LHX6-209ENST00000559529 CHD1O14646 1710 aa26.39■■□□□ 1.81
LHX6-209ENST00000559529 SYNJ1O43426 1573 aa26.36■■□□□ 1.81
LHX6-209ENST00000559529 CUX1P39880 1505 aa26.34■■□□□ 1.81
LHX6-209ENST00000559529 WDR97A6NE52 1622 aa26.33■■□□□ 1.81
LHX6-209ENST00000559529 RAD54L2Q9Y4B4 1467 aa26.3■■□□□ 1.8
LHX6-209ENST00000559529 ARAP1Q96P48 1450 aa26.28■■□□□ 1.8
LHX6-209ENST00000559529 SOGA1O94964 1423 aa26.26■■□□□ 1.79
LHX6-209ENST00000559529 FGD5Q6ZNL6 1462 aa26.23■■□□□ 1.79
LHX6-209ENST00000559529 TDRD9Q8NDG6 1382 aaKnown RBP26.2■■□□□ 1.79
LHX6-209ENST00000559529 CLASP1Q7Z460 1538 aa26.2■■□□□ 1.79
LHX6-209ENST00000559529 CYB5RLQ6IPT4 315 aa26.19■■□□□ 1.78
LHX6-209ENST00000559529 SNAPC4Q5SXM2 1469 aa26.17■■□□□ 1.78
LHX6-209ENST00000559529 MAGI1Q96QZ7 1491 aaPredicted RBP26.17■■□□□ 1.78
LHX6-209ENST00000559529 EEA1Q15075 1411 aa26.14■■□□□ 1.77
LHX6-209ENST00000559529 GRIN2BQ13224 1484 aa26.11■■□□□ 1.77
LHX6-209ENST00000559529 FBLN2P98095 1184 aa26.09■■□□□ 1.77
LHX6-209ENST00000559529 SYNJ2O15056 1496 aa26.06■■□□□ 1.76
LHX6-209ENST00000559529 ABCA10Q8WWZ4 1543 aa25.99■■□□□ 1.75
LHX6-209ENST00000559529 ABCA5Q8WWZ7 1642 aa25.99■■□□□ 1.75
LHX6-209ENST00000559529 CHMP7Q8WUX9 453 aaPredicted RBP25.97■■□□□ 1.75
LHX6-209ENST00000559529 GAPVD1Q14C86 1478 aa25.97■■□□□ 1.75
LHX6-209ENST00000559529 PBRM1Q86U86 1689 aa25.96■■□□□ 1.75
LHX6-209ENST00000559529 KIF27Q86VH2 1401 aa25.94■■□□□ 1.74
LHX6-209ENST00000559529 TRHP20396 242 aaPredicted RBP25.84■■□□□ 1.73
LHX6-209ENST00000559529 CSRNP3Q8WYN3 585 aa25.83■■□□□ 1.73
LHX6-209ENST00000559529 RUSC2Q8N2Y8 1516 aa25.82■■□□□ 1.72
LHX6-209ENST00000559529 GRIN2AQ12879 1464 aa25.79■■□□□ 1.72
LHX6-209ENST00000559529 ADAMTS12P58397 1594 aa25.78■■□□□ 1.72
LHX6-209ENST00000559529 NUP160Q12769 1436 aa25.77■■□□□ 1.72
LHX6-209ENST00000559529 FAM9AQ8IZU1 332 aaPredicted RBP25.74■■□□□ 1.71
LHX6-209ENST00000559529 KIF21BO75037 1637 aa25.72■■□□□ 1.71
LHX6-209ENST00000559529 CEP170Q5SW79 1584 aa25.71■■□□□ 1.71
LHX6-209ENST00000559529 ERCC6L2Q5T890 1561 aa25.7■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms