RNA–Protein interactions for RNA: ENST00000559491.1

RNF31-215, Transcript of ring finger protein 31, humanhuman

TSL 2

Gene RNF31, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31-215ENST00000559491 NISCHQ9Y2I1 1504 aa28.93■■■□□ 2.22
RNF31-215ENST00000559491 CCDC180Q9P1Z9 1646 aa25.97■■□□□ 1.75
RNF31-215ENST00000559491 ABCC9O60706 1549 aa25.93■■□□□ 1.74
RNF31-215ENST00000559491 RB1CC1Q8TDY2 1594 aa24.66■■□□□ 1.54
RNF31-215ENST00000559491 NACADO15069 1562 aa24.48■■□□□ 1.51
RNF31-215ENST00000559491 DCAF8L2P0C7V8 631 aa24.37■■□□□ 1.49
RNF31-215ENST00000559491 DNAJC5BQ9UF47 199 aa24.32■■□□□ 1.48
RNF31-215ENST00000559491 UNC13AQ9UPW8 1703 aa24.3■■□□□ 1.48
RNF31-215ENST00000559491 PABPN1Q86U42 306 aaKnown RBP eCLIP24.13■■□□□ 1.456e-7■■■□□ 17.2
RNF31-215ENST00000559491 MYO15BQ96JP2 1530 aa24.11■■□□□ 1.45
RNF31-215ENST00000559491 BICRAQ9NZM4 1560 aa24.03■■□□□ 1.44
RNF31-215ENST00000559491 ZCCHC6Q5VYS8 1495 aaKnown RBP23.99■■□□□ 1.43
RNF31-215ENST00000559491 DCAF1Q9Y4B6 1507 aa23.84■■□□□ 1.41
RNF31-215ENST00000559491 SCRIBQ14160 1630 aa23.7■■□□□ 1.39
RNF31-215ENST00000559491 SHROOM4Q9ULL8 1493 aa23.53■■□□□ 1.36
RNF31-215ENST00000559491 CC2D2AQ9P2K1 1620 aa23.45■■□□□ 1.34
RNF31-215ENST00000559491 EIF4G1Q04637 1599 aaKnown RBP23.39■■□□□ 1.33
RNF31-215ENST00000559491 CECR2Q9BXF3 1484 aa23.31■■□□□ 1.32
RNF31-215ENST00000559491 SMARCA4P51532 1647 aa22.6■■□□□ 1.21
RNF31-215ENST00000559491 NCAPD3P42695 1498 aa22.59■■□□□ 1.21
RNF31-215ENST00000559491 ATAD2BQ9ULI0 1458 aa22.55■■□□□ 1.2
RNF31-215ENST00000559491 SMARCA2P51531 1590 aa22.47■■□□□ 1.19
RNF31-215ENST00000559491 HMGXB3Q12766 1538 aa22.45■■□□□ 1.18
RNF31-215ENST00000559491 BAZ1AQ9NRL2 1556 aaPredicted RBP22.42■■□□□ 1.18
RNF31-215ENST00000559491 MROH2BQ7Z745 1585 aa22.33■■□□□ 1.17
RNF31-215ENST00000559491 PEG3Q9GZU2 1588 aa22.33■■□□□ 1.17
RNF31-215ENST00000559491 NESP48681 1621 aa22.33■■□□□ 1.17
RNF31-215ENST00000559491 BAZ1BQ9UIG0 1483 aaKnown RBP22.33■■□□□ 1.16
RNF31-215ENST00000559491 ERCC6Q03468 1493 aa22.32■■□□□ 1.16
RNF31-215ENST00000559491 CUX2O14529 1486 aa22.25■■□□□ 1.15
RNF31-215ENST00000559491 DNAJC5Q9H3Z4 198 aa22.2■■□□□ 1.14
RNF31-215ENST00000559491 WIZO95785 1651 aa22.13■■□□□ 1.13
RNF31-215ENST00000559491 KIF21AQ7Z4S6 1674 aa22.11■■□□□ 1.13
RNF31-215ENST00000559491 THOC2Q8NI27 1593 aaKnown RBP22.1■■□□□ 1.13
RNF31-215ENST00000559491 LAMC3Q9Y6N6 1575 aa22.1■■□□□ 1.13
RNF31-215ENST00000559491 PDS5BQ9NTI5 1447 aa21.9■■□□□ 1.1
RNF31-215ENST00000559491 CADPSQ9ULU8 1353 aa21.89■■□□□ 1.1
RNF31-215ENST00000559491 RSF1Q96T23 1441 aaPredicted RBP21.84■■□□□ 1.09
RNF31-215ENST00000559491 MRC2Q9UBG0 1479 aa21.77■■□□□ 1.08
RNF31-215ENST00000559491 TOP2AP11388 1531 aaKnown RBP21.75■■□□□ 1.07
RNF31-215ENST00000559491 WDR62O43379 1518 aa21.74■■□□□ 1.07
RNF31-215ENST00000559491 CEP164Q9UPV0 1460 aa21.69■■□□□ 1.06
RNF31-215ENST00000559491 CFTRP13569 1480 aa21.68■■□□□ 1.06
RNF31-215ENST00000559491 FANCD2Q9BXW9 1451 aa21.68■■□□□ 1.06
RNF31-215ENST00000559491 PRDM2Q13029 1718 aa21.61■■□□□ 1.05
RNF31-215ENST00000559491 URB2Q14146 1524 aaKnown RBP21.55■■□□□ 1.04
RNF31-215ENST00000559491 CCDC88BA6NC98 1476 aa21.52■■□□□ 1.03
RNF31-215ENST00000559491 TOPBP1Q92547 1522 aa21.29■■□□□ 1
RNF31-215ENST00000559491 TRIM41Q8WV44 630 aa21.29■■□□□ 1
RNF31-215ENST00000559491 ZNF608Q9ULD9 1512 aaPredicted RBP21.28■■□□□ 1
RNF31-215ENST00000559491 IFT140Q96RY7 1462 aa21.23■□□□□ 0.99
RNF31-215ENST00000559491 DNMBPQ6XZF7 1577 aa21.23■□□□□ 0.99
RNF31-215ENST00000559491 OSCARQ8IYS5 282 aa21.21■□□□□ 0.99
RNF31-215ENST00000559491 EIF4G3O43432 1585 aaKnown RBP21.19■□□□□ 0.98
RNF31-215ENST00000559491 ABCC8Q09428 1581 aa21.16■□□□□ 0.98
RNF31-215ENST00000559491 TARBP1Q13395 1621 aaKnown RBP21.15■□□□□ 0.98
RNF31-215ENST00000559491 CHD1O14646 1710 aa21.09■□□□□ 0.97
RNF31-215ENST00000559491 POLA1P09884 1462 aaPredicted RBP21.08■□□□□ 0.97
RNF31-215ENST00000559491 RIMBP3CA6NJZ7 1639 aa21.07■□□□□ 0.96
RNF31-215ENST00000559491 RIMBP3BA6NNM3 1639 aa21.07■□□□□ 0.96
RNF31-215ENST00000559491 RIMBP3Q9UFD9 1639 aa21.07■□□□□ 0.96
RNF31-215ENST00000559491 AQRO60306 1485 aaKnown RBP eCLIP21.07■□□□□ 0.967e-9■■□□□ 14.3
RNF31-215ENST00000559491 RAD54L2Q9Y4B4 1467 aa21.03■□□□□ 0.96
RNF31-215ENST00000559491 CUX1P39880 1505 aa20.98■□□□□ 0.95
RNF31-215ENST00000559491 FGD5Q6ZNL6 1462 aa20.96■□□□□ 0.95
RNF31-215ENST00000559491 ARHGEF11O15085 1522 aa20.96■□□□□ 0.95
RNF31-215ENST00000559491 SOGA1O94964 1423 aa20.95■□□□□ 0.94
RNF31-215ENST00000559491 TDRD9Q8NDG6 1382 aaKnown RBP20.93■□□□□ 0.94
RNF31-215ENST00000559491 SUPT5HO00267 1087 aaKnown RBP20.9■□□□□ 0.94
RNF31-215ENST00000559491 WDR97A6NE52 1622 aa20.89■□□□□ 0.94
RNF31-215ENST00000559491 FBLN2P98095 1184 aa20.87■□□□□ 0.93
RNF31-215ENST00000559491 SNAPC4Q5SXM2 1469 aa20.85■□□□□ 0.93
RNF31-215ENST00000559491 PBRM1Q86U86 1689 aa20.82■□□□□ 0.92
RNF31-215ENST00000559491 ARAP1Q96P48 1450 aa20.77■□□□□ 0.92
RNF31-215ENST00000559491 CYB5RLQ6IPT4 315 aa20.76■□□□□ 0.91
RNF31-215ENST00000559491 GRIN2BQ13224 1484 aa20.75■□□□□ 0.91
RNF31-215ENST00000559491 CLASP1Q7Z460 1538 aa20.75■□□□□ 0.91
RNF31-215ENST00000559491 MAGI1Q96QZ7 1491 aaPredicted RBP20.75■□□□□ 0.91
RNF31-215ENST00000559491 ABCA5Q8WWZ7 1642 aa20.72■□□□□ 0.91
RNF31-215ENST00000559491 GAPVD1Q14C86 1478 aa20.7■□□□□ 0.9
RNF31-215ENST00000559491 SYNJ1O43426 1573 aa20.7■□□□□ 0.9
RNF31-215ENST00000559491 ABCA10Q8WWZ4 1543 aa20.69■□□□□ 0.9
RNF31-215ENST00000559491 CHMP7Q8WUX9 453 aaPredicted RBP20.69■□□□□ 0.9
RNF31-215ENST00000559491 SYNJ2O15056 1496 aa20.69■□□□□ 0.9
RNF31-215ENST00000559491 BIVM-ERCC5R4GMW8 1640 aa20.67■□□□□ 0.9
RNF31-215ENST00000559491 TOP2BQ02880 1626 aa20.64■□□□□ 0.89
RNF31-215ENST00000559491 WRNQ14191 1432 aaPredicted RBP eCLIP20.58■□□□□ 0.88
RNF31-215ENST00000559491 ADAMTS12P58397 1594 aa20.55■□□□□ 0.88
RNF31-215ENST00000559491 GRIN2AQ12879 1464 aa20.51■□□□□ 0.87
RNF31-215ENST00000559491 CEP170Q5SW79 1584 aa20.51■□□□□ 0.87
RNF31-215ENST00000559491 TRHP20396 242 aaPredicted RBP20.5■□□□□ 0.87
RNF31-215ENST00000559491 ERCC6L2Q5T890 1561 aa20.5■□□□□ 0.87
RNF31-215ENST00000559491 NUP160Q12769 1436 aa20.44■□□□□ 0.86
RNF31-215ENST00000559491 ERICH3Q5RHP9 1530 aa20.43■□□□□ 0.86
RNF31-215ENST00000559491 FHAD1B1AJZ9 1412 aa20.41■□□□□ 0.86
RNF31-215ENST00000559491 SHROOM2Q13796 1616 aa20.41■□□□□ 0.86
RNF31-215ENST00000559491 RUSC2Q8N2Y8 1516 aa20.27■□□□□ 0.84
RNF31-215ENST00000559491 PRG4Q92954 1404 aaPredicted RBP20.24■□□□□ 0.83
RNF31-215ENST00000559491 KIF13AQ9H1H9 1805 aa20.19■□□□□ 0.82
RNF31-215ENST00000559491 JPH4Q96JJ6 628 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms