RNA–Protein interactions for RNA: ENST00000559459.5

MYO5C-207, Transcript of myosin VC, humanhuman

TSL 1 (best)

Gene MYO5C, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYO5C-207ENST00000559459 NISCHQ9Y2I1 1504 aa33.18■■■□□ 2.9
MYO5C-207ENST00000559459 CCDC180Q9P1Z9 1646 aa29.17■■■□□ 2.26
MYO5C-207ENST00000559459 ABCC9O60706 1549 aa28.06■■■□□ 2.08
MYO5C-207ENST00000559459 ZCCHC6Q5VYS8 1495 aaKnown RBP27.78■■■□□ 2.04
MYO5C-207ENST00000559459 DCAF8L2P0C7V8 631 aa27.56■■■□□ 2
MYO5C-207ENST00000559459 DCAF1Q9Y4B6 1507 aa27.38■■□□□ 1.97
MYO5C-207ENST00000559459 NACADO15069 1562 aa27.24■■□□□ 1.95
MYO5C-207ENST00000559459 MYO15BQ96JP2 1530 aa27.22■■□□□ 1.95
MYO5C-207ENST00000559459 RB1CC1Q8TDY2 1594 aa27.14■■□□□ 1.93
MYO5C-207ENST00000559459 SCRIBQ14160 1630 aa26.82■■□□□ 1.88
MYO5C-207ENST00000559459 SHROOM4Q9ULL8 1493 aa26.79■■□□□ 1.88
MYO5C-207ENST00000559459 UNC13AQ9UPW8 1703 aa26.75■■□□□ 1.87
MYO5C-207ENST00000559459 BICRAQ9NZM4 1560 aa26.42■■□□□ 1.82
MYO5C-207ENST00000559459 PABPN1Q86U42 306 aaKnown RBP eCLIP26.36■■□□□ 1.81
MYO5C-207ENST00000559459 CECR2Q9BXF3 1484 aa25.89■■□□□ 1.74
MYO5C-207ENST00000559459 MROH2BQ7Z745 1585 aa25.67■■□□□ 1.7
MYO5C-207ENST00000559459 SMARCA4P51532 1647 aa25.65■■□□□ 1.7
MYO5C-207ENST00000559459 BAZ1AQ9NRL2 1556 aaPredicted RBP25.64■■□□□ 1.7
MYO5C-207ENST00000559459 EIF4G1Q04637 1599 aaKnown RBP25.63■■□□□ 1.69
MYO5C-207ENST00000559459 RSF1Q96T23 1441 aaPredicted RBP25.55■■□□□ 1.68
MYO5C-207ENST00000559459 SUPT5HO00267 1087 aaKnown RBP25.49■■□□□ 1.67
MYO5C-207ENST00000559459 WIZO95785 1651 aa25.48■■□□□ 1.67
MYO5C-207ENST00000559459 CC2D2AQ9P2K1 1620 aa25.39■■□□□ 1.66
MYO5C-207ENST00000559459 PEG3Q9GZU2 1588 aa25.32■■□□□ 1.64
MYO5C-207ENST00000559459 ATAD2BQ9ULI0 1458 aa25.31■■□□□ 1.64
MYO5C-207ENST00000559459 SMARCA2P51531 1590 aa25.25■■□□□ 1.63
MYO5C-207ENST00000559459 DNAJC5BQ9UF47 199 aa25.24■■□□□ 1.63
MYO5C-207ENST00000559459 NCAPD3P42695 1498 aa25.14■■□□□ 1.61
MYO5C-207ENST00000559459 BAZ1BQ9UIG0 1483 aaKnown RBP25.13■■□□□ 1.61
MYO5C-207ENST00000559459 TOP2AP11388 1531 aaKnown RBP25.11■■□□□ 1.61
MYO5C-207ENST00000559459 HMGXB3Q12766 1538 aa25.09■■□□□ 1.61
MYO5C-207ENST00000559459 CCDC88BA6NC98 1476 aa24.86■■□□□ 1.57
MYO5C-207ENST00000559459 NESP48681 1621 aa24.52■■□□□ 1.52
MYO5C-207ENST00000559459 CFTRP13569 1480 aa24.46■■□□□ 1.51
MYO5C-207ENST00000559459 CADPSQ9ULU8 1353 aa24.46■■□□□ 1.51
MYO5C-207ENST00000559459 PRDM2Q13029 1718 aa24.4■■□□□ 1.5
MYO5C-207ENST00000559459 LAMC3Q9Y6N6 1575 aa24.39■■□□□ 1.49
MYO5C-207ENST00000559459 ABCC8Q09428 1581 aa24.26■■□□□ 1.47
MYO5C-207ENST00000559459 KIF21AQ7Z4S6 1674 aa24.25■■□□□ 1.47
MYO5C-207ENST00000559459 FANCD2Q9BXW9 1451 aa24.22■■□□□ 1.47
MYO5C-207ENST00000559459 PDS5BQ9NTI5 1447 aa24.16■■□□□ 1.46
MYO5C-207ENST00000559459 CHIC1Q5VXU3 224 aa24.12■■□□□ 1.45
MYO5C-207ENST00000559459 CEP164Q9UPV0 1460 aa24.1■■□□□ 1.45
MYO5C-207ENST00000559459 SYNJ1O43426 1573 aa24.06■■□□□ 1.44
MYO5C-207ENST00000559459 WRNQ14191 1432 aaPredicted RBP eCLIP24.05■■□□□ 1.44
MYO5C-207ENST00000559459 ERCC6Q03468 1493 aa24.04■■□□□ 1.44
MYO5C-207ENST00000559459 CUX1P39880 1505 aa24.02■■□□□ 1.44
MYO5C-207ENST00000559459 URB2Q14146 1524 aaKnown RBP23.99■■□□□ 1.43
MYO5C-207ENST00000559459 TOP2BQ02880 1626 aa23.95■■□□□ 1.42
MYO5C-207ENST00000559459 BIVM-ERCC5R4GMW8 1640 aa23.95■■□□□ 1.42
MYO5C-207ENST00000559459 THOC2Q8NI27 1593 aaKnown RBP23.94■■□□□ 1.42
MYO5C-207ENST00000559459 TRIM41Q8WV44 630 aa23.93■■□□□ 1.42
MYO5C-207ENST00000559459 MRC2Q9UBG0 1479 aa23.93■■□□□ 1.42
MYO5C-207ENST00000559459 TOPBP1Q92547 1522 aa23.92■■□□□ 1.42
MYO5C-207ENST00000559459 DNMBPQ6XZF7 1577 aa23.92■■□□□ 1.42
MYO5C-207ENST00000559459 WDR62O43379 1518 aa23.85■■□□□ 1.41
MYO5C-207ENST00000559459 FGD5Q6ZNL6 1462 aa23.82■■□□□ 1.4
MYO5C-207ENST00000559459 POLA1P09884 1462 aaPredicted RBP23.77■■□□□ 1.4
MYO5C-207ENST00000559459 RAD54L2Q9Y4B4 1467 aa23.72■■□□□ 1.39
MYO5C-207ENST00000559459 CUX2O14529 1486 aa23.69■■□□□ 1.38
MYO5C-207ENST00000559459 SOGA1O94964 1423 aa23.65■■□□□ 1.38
MYO5C-207ENST00000559459 TARBP1Q13395 1621 aaKnown RBP23.64■■□□□ 1.38
MYO5C-207ENST00000559459 RUSC2Q8N2Y8 1516 aa23.64■■□□□ 1.37
MYO5C-207ENST00000559459 WDR97A6NE52 1622 aa23.62■■□□□ 1.37
MYO5C-207ENST00000559459 FAM9AQ8IZU1 332 aaPredicted RBP23.57■■□□□ 1.36
MYO5C-207ENST00000559459 ABCA10Q8WWZ4 1543 aa23.56■■□□□ 1.36
MYO5C-207ENST00000559459 IFT140Q96RY7 1462 aa23.54■■□□□ 1.36
MYO5C-207ENST00000559459 ZNF608Q9ULD9 1512 aaPredicted RBP23.52■■□□□ 1.36
MYO5C-207ENST00000559459 TDRD9Q8NDG6 1382 aaKnown RBP23.51■■□□□ 1.35
MYO5C-207ENST00000559459 ABCA5Q8WWZ7 1642 aa23.47■■□□□ 1.35
MYO5C-207ENST00000559459 AQRO60306 1485 aaKnown RBP eCLIP23.46■■□□□ 1.35
MYO5C-207ENST00000559459 KIF27Q86VH2 1401 aa23.44■■□□□ 1.34
MYO5C-207ENST00000559459 EIF4G3O43432 1585 aaKnown RBP23.43■■□□□ 1.34
MYO5C-207ENST00000559459 GAPVD1Q14C86 1478 aa23.39■■□□□ 1.34
MYO5C-207ENST00000559459 PBRM1Q86U86 1689 aa23.38■■□□□ 1.33
MYO5C-207ENST00000559459 EEA1Q15075 1411 aa23.36■■□□□ 1.33
MYO5C-207ENST00000559459 CSRNP3Q8WYN3 585 aa23.33■■□□□ 1.33
MYO5C-207ENST00000559459 IGF1RP08069 1367 aa23.32■■□□□ 1.32
MYO5C-207ENST00000559459 EHMT2Q96KQ7 1210 aa23.32■■□□□ 1.32
MYO5C-207ENST00000559459 ERICH3Q5RHP9 1530 aa23.27■■□□□ 1.32
MYO5C-207ENST00000559459 GRIN2BQ13224 1484 aa23.26■■□□□ 1.31
MYO5C-207ENST00000559459 LOC105371045A0A1W2PR82 267 aa23.24■■□□□ 1.31
MYO5C-207ENST00000559459 SNAPC4Q5SXM2 1469 aa23.21■■□□□ 1.31
MYO5C-207ENST00000559459 PRXQ9BXM0 1461 aa23.2■■□□□ 1.31
MYO5C-207ENST00000559459 CUL7Q14999 1698 aa23.2■■□□□ 1.3
MYO5C-207ENST00000559459 KIF21BO75037 1637 aa23.19■■□□□ 1.3
MYO5C-207ENST00000559459 CARMIL1Q5VZK9 1371 aa23.18■■□□□ 1.3
MYO5C-207ENST00000559459 RAPGEF2Q9Y4G8 1499 aa23.18■■□□□ 1.3
MYO5C-207ENST00000559459 ADAMTS12P58397 1594 aa23.18■■□□□ 1.3
MYO5C-207ENST00000559459 MAGI1Q96QZ7 1491 aaPredicted RBP23.12■■□□□ 1.29
MYO5C-207ENST00000559459 FHAD1B1AJZ9 1412 aa23.1■■□□□ 1.29
MYO5C-207ENST00000559459 GOLGA3Q08378 1498 aa23.08■■□□□ 1.29
MYO5C-207ENST00000559459 CHD1O14646 1710 aa23.06■■□□□ 1.28
MYO5C-207ENST00000559459 SYNJ2O15056 1496 aa23.05■■□□□ 1.28
MYO5C-207ENST00000559459 FBLN2P98095 1184 aa23.03■■□□□ 1.28
MYO5C-207ENST00000559459 GRIN2AQ12879 1464 aa23.01■■□□□ 1.27
MYO5C-207ENST00000559459 UBTFP17480 764 aaKnown RBP23■■□□□ 1.27
MYO5C-207ENST00000559459 CHMP7Q8WUX9 453 aaPredicted RBP22.99■■□□□ 1.27
MYO5C-207ENST00000559459 CTTNBP2Q8WZ74 1663 aa22.94■■□□□ 1.26
MYO5C-207ENST00000559459 CEP170Q5SW79 1584 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms