RNA–Protein interactions for RNA: ENST00000559442.1

AMN-204, Transcript of amnion associated transmembrane protein, humanhuman

TSL 2

Gene AMN, Length 470 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMN-204ENST00000559442 NISCHQ9Y2I1 1504 aa50.1■■■■■ 5.61
AMN-204ENST00000559442 CCDC180Q9P1Z9 1646 aa44.86■■■■■ 4.77
AMN-204ENST00000559442 ABCC9O60706 1549 aa44.81■■■■■ 4.76
AMN-204ENST00000559442 RB1CC1Q8TDY2 1594 aa42.7■■■■■ 4.43
AMN-204ENST00000559442 NACADO15069 1562 aa42.44■■■■■ 4.38
AMN-204ENST00000559442 DCAF8L2P0C7V8 631 aa42.33■■■■■ 4.37
AMN-204ENST00000559442 DNAJC5BQ9UF47 199 aa41.89■■■■■ 4.3
AMN-204ENST00000559442 MYO15BQ96JP2 1530 aa41.89■■■■■ 4.3
AMN-204ENST00000559442 PABPN1Q86U42 306 aaKnown RBP eCLIP41.76■■■■■ 4.28
AMN-204ENST00000559442 UNC13AQ9UPW8 1703 aa41.59■■■■■ 4.25
AMN-204ENST00000559442 ZCCHC6Q5VYS8 1495 aaKnown RBP41.55■■■■■ 4.24
AMN-204ENST00000559442 DCAF1Q9Y4B6 1507 aa41.39■■■■■ 4.22
AMN-204ENST00000559442 BICRAQ9NZM4 1560 aa41.38■■■■■ 4.22
AMN-204ENST00000559442 SCRIBQ14160 1630 aa40.93■■■■■ 4.14
AMN-204ENST00000559442 SHROOM4Q9ULL8 1493 aa40.92■■■■■ 4.14
AMN-204ENST00000559442 CC2D2AQ9P2K1 1620 aa40.45■■■■■ 4.07
AMN-204ENST00000559442 EIF4G1Q04637 1599 aaKnown RBP40.41■■■■■ 4.06
AMN-204ENST00000559442 CECR2Q9BXF3 1484 aa40.37■■■■■ 4.05
AMN-204ENST00000559442 NCAPD3P42695 1498 aa39.18■■■■□ 3.86
AMN-204ENST00000559442 ATAD2BQ9ULI0 1458 aa39.08■■■■□ 3.85
AMN-204ENST00000559442 SMARCA4P51532 1647 aa39.03■■■■□ 3.84
AMN-204ENST00000559442 SMARCA2P51531 1590 aa38.99■■■■□ 3.83
AMN-204ENST00000559442 BAZ1AQ9NRL2 1556 aaPredicted RBP38.91■■■■□ 3.82
AMN-204ENST00000559442 HMGXB3Q12766 1538 aa38.89■■■■□ 3.82
AMN-204ENST00000559442 BAZ1BQ9UIG0 1483 aaKnown RBP38.73■■■■□ 3.79
AMN-204ENST00000559442 ERCC6Q03468 1493 aa38.73■■■■□ 3.79
AMN-204ENST00000559442 PEG3Q9GZU2 1588 aa38.65■■■■□ 3.78
AMN-204ENST00000559442 MROH2BQ7Z745 1585 aa38.6■■■■□ 3.77
AMN-204ENST00000559442 CUX2O14529 1486 aa38.59■■■■□ 3.77
AMN-204ENST00000559442 NESP48681 1621 aa38.5■■■■□ 3.75
AMN-204ENST00000559442 DNAJC5Q9H3Z4 198 aa38.43■■■■□ 3.74
AMN-204ENST00000559442 LAMC3Q9Y6N6 1575 aa38.27■■■■□ 3.72
AMN-204ENST00000559442 WIZO95785 1651 aa38.11■■■■□ 3.69
AMN-204ENST00000559442 PDS5BQ9NTI5 1447 aa38.1■■■■□ 3.69
AMN-204ENST00000559442 THOC2Q8NI27 1593 aaKnown RBP38.06■■■■□ 3.68
AMN-204ENST00000559442 CADPSQ9ULU8 1353 aa38.02■■■■□ 3.68
AMN-204ENST00000559442 KIF21AQ7Z4S6 1674 aa37.95■■■■□ 3.67
AMN-204ENST00000559442 RSF1Q96T23 1441 aaPredicted RBP37.87■■■■□ 3.65
AMN-204ENST00000559442 MRC2Q9UBG0 1479 aa37.73■■■■□ 3.63
AMN-204ENST00000559442 TOP2AP11388 1531 aaKnown RBP37.68■■■■□ 3.62
AMN-204ENST00000559442 CEP164Q9UPV0 1460 aa37.62■■■■□ 3.61
AMN-204ENST00000559442 WDR62O43379 1518 aa37.61■■■■□ 3.61
AMN-204ENST00000559442 CFTRP13569 1480 aa37.59■■■■□ 3.61
AMN-204ENST00000559442 FANCD2Q9BXW9 1451 aa37.58■■■■□ 3.61
AMN-204ENST00000559442 CCDC88BA6NC98 1476 aa37.26■■■■□ 3.55
AMN-204ENST00000559442 URB2Q14146 1524 aaKnown RBP37.23■■■■□ 3.55
AMN-204ENST00000559442 PRDM2Q13029 1718 aa37.11■■■■□ 3.53
AMN-204ENST00000559442 OSCARQ8IYS5 282 aa36.89■■■■□ 3.5
AMN-204ENST00000559442 IFT140Q96RY7 1462 aa36.87■■■■□ 3.49
AMN-204ENST00000559442 TOPBP1Q92547 1522 aa36.86■■■■□ 3.49
AMN-204ENST00000559442 TRIM41Q8WV44 630 aa36.84■■■■□ 3.49
AMN-204ENST00000559442 ABCC8Q09428 1581 aa36.83■■■■□ 3.49
AMN-204ENST00000559442 ZNF608Q9ULD9 1512 aaPredicted RBP36.75■■■■□ 3.47
AMN-204ENST00000559442 DNMBPQ6XZF7 1577 aa36.74■■■■□ 3.47
AMN-204ENST00000559442 EIF4G3O43432 1585 aaKnown RBP36.54■■■■□ 3.44
AMN-204ENST00000559442 POLA1P09884 1462 aaPredicted RBP36.5■■■■□ 3.43
AMN-204ENST00000559442 TARBP1Q13395 1621 aaKnown RBP36.48■■■■□ 3.43
AMN-204ENST00000559442 AQRO60306 1485 aaKnown RBP eCLIP36.46■■■■□ 3.43
AMN-204ENST00000559442 SUPT5HO00267 1087 aaKnown RBP36.45■■■■□ 3.43
AMN-204ENST00000559442 RAD54L2Q9Y4B4 1467 aa36.37■■■■□ 3.41
AMN-204ENST00000559442 SOGA1O94964 1423 aa36.36■■■■□ 3.41
AMN-204ENST00000559442 FGD5Q6ZNL6 1462 aa36.3■■■■□ 3.4
AMN-204ENST00000559442 RIMBP3CA6NJZ7 1639 aa36.3■■■■□ 3.4
AMN-204ENST00000559442 RIMBP3BA6NNM3 1639 aa36.3■■■■□ 3.4
AMN-204ENST00000559442 RIMBP3Q9UFD9 1639 aa36.3■■■■□ 3.4
AMN-204ENST00000559442 TDRD9Q8NDG6 1382 aaKnown RBP36.27■■■■□ 3.4
AMN-204ENST00000559442 FBLN2P98095 1184 aa36.26■■■■□ 3.4
AMN-204ENST00000559442 CUX1P39880 1505 aa36.25■■■■□ 3.39
AMN-204ENST00000559442 ARHGEF11O15085 1522 aa36.24■■■■□ 3.39
AMN-204ENST00000559442 CHD1O14646 1710 aa36.2■■■■□ 3.39
AMN-204ENST00000559442 WDR97A6NE52 1622 aa36.16■■■■□ 3.38
AMN-204ENST00000559442 SNAPC4Q5SXM2 1469 aa36.1■■■■□ 3.37
AMN-204ENST00000559442 GRIN2BQ13224 1484 aa36.04■■■■□ 3.36
AMN-204ENST00000559442 CHMP7Q8WUX9 453 aaPredicted RBP36.02■■■■□ 3.36
AMN-204ENST00000559442 MAGI1Q96QZ7 1491 aaPredicted RBP36.02■■■■□ 3.36
AMN-204ENST00000559442 CYB5RLQ6IPT4 315 aa36.01■■■■□ 3.36
AMN-204ENST00000559442 GAPVD1Q14C86 1478 aa35.92■■■■□ 3.34
AMN-204ENST00000559442 ABCA10Q8WWZ4 1543 aa35.89■■■■□ 3.34
AMN-204ENST00000559442 SYNJ2O15056 1496 aa35.89■■■■□ 3.34
AMN-204ENST00000559442 ARAP1Q96P48 1450 aa35.88■■■■□ 3.33
AMN-204ENST00000559442 SYNJ1O43426 1573 aa35.87■■■■□ 3.33
AMN-204ENST00000559442 CLASP1Q7Z460 1538 aa35.83■■■■□ 3.33
AMN-204ENST00000559442 PBRM1Q86U86 1689 aa35.81■■■■□ 3.32
AMN-204ENST00000559442 WRNQ14191 1432 aaPredicted RBP eCLIP35.8■■■■□ 3.32
AMN-204ENST00000559442 ABCA5Q8WWZ7 1642 aa35.78■■■■□ 3.32
AMN-204ENST00000559442 TOP2BQ02880 1626 aa35.7■■■■□ 3.31
AMN-204ENST00000559442 BIVM-ERCC5R4GMW8 1640 aa35.68■■■■□ 3.3
AMN-204ENST00000559442 TRHP20396 242 aaPredicted RBP35.61■■■■□ 3.29
AMN-204ENST00000559442 GRIN2AQ12879 1464 aa35.55■■■■□ 3.28
AMN-204ENST00000559442 ADAMTS12P58397 1594 aa35.52■■■■□ 3.28
AMN-204ENST00000559442 FHAD1B1AJZ9 1412 aa35.49■■■■□ 3.27
AMN-204ENST00000559442 ERICH3Q5RHP9 1530 aa35.44■■■■□ 3.26
AMN-204ENST00000559442 NUP160Q12769 1436 aa35.43■■■■□ 3.26
AMN-204ENST00000559442 CEP170Q5SW79 1584 aa35.38■■■■□ 3.25
AMN-204ENST00000559442 ERCC6L2Q5T890 1561 aa35.27■■■■□ 3.24
AMN-204ENST00000559442 SHROOM2Q13796 1616 aa35.2■■■■□ 3.23
AMN-204ENST00000559442 PRG4Q92954 1404 aaPredicted RBP35.1■■■■□ 3.21
AMN-204ENST00000559442 JPH4Q96JJ6 628 aa35.1■■■■□ 3.21
AMN-204ENST00000559442 KIF27Q86VH2 1401 aa35.08■■■■□ 3.21
AMN-204ENST00000559442 IGF1RP08069 1367 aa35.02■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms