RNA–Protein interactions for RNA: ENST00000559384.1

CHSY1-203, Transcript of chondroitin sulfate synthase 1, humanhuman

TSL 3

Gene CHSY1, Length 139 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHSY1-203ENST00000559384 NISCHQ9Y2I1 1504 aa15.52■□□□□ 0.07
CHSY1-203ENST00000559384 AEBP2Q6ZN18 517 aaPredicted RBP15.22■□□□□ 0.03
CHSY1-203ENST00000559384 CHIC1Q5VXU3 224 aa14.83□□□□□ -0.04
CHSY1-203ENST00000559384 ABCC9O60706 1549 aa14.1□□□□□ -0.15
CHSY1-203ENST00000559384 CCDC180Q9P1Z9 1646 aa14□□□□□ -0.17
CHSY1-203ENST00000559384 RB1CC1Q8TDY2 1594 aa13.37□□□□□ -0.27
CHSY1-203ENST00000559384 DNAJC5BQ9UF47 199 aa13.32□□□□□ -0.28
CHSY1-203ENST00000559384 NACADO15069 1562 aa13.24□□□□□ -0.29
CHSY1-203ENST00000559384 DCAF8L2P0C7V8 631 aa13.18□□□□□ -0.3
CHSY1-203ENST00000559384 UNC13AQ9UPW8 1703 aa13.13□□□□□ -0.31
CHSY1-203ENST00000559384 PABPN1Q86U42 306 aaKnown RBP eCLIP13.11□□□□□ -0.31
CHSY1-203ENST00000559384 PHF23Q9BUL5 403 aaPredicted RBP13.03□□□□□ -0.32
CHSY1-203ENST00000559384 BICRAQ9NZM4 1560 aa12.99□□□□□ -0.33
CHSY1-203ENST00000559384 MYO15BQ96JP2 1530 aa12.99□□□□□ -0.33
CHSY1-203ENST00000559384 SENP3Q9H4L4 574 aaPredicted RBP12.95□□□□□ -0.34
CHSY1-203ENST00000559384 ZCCHC6Q5VYS8 1495 aaKnown RBP12.83□□□□□ -0.36
CHSY1-203ENST00000559384 DCAF1Q9Y4B6 1507 aa12.79□□□□□ -0.36
CHSY1-203ENST00000559384 SCRIBQ14160 1630 aa12.76□□□□□ -0.37
CHSY1-203ENST00000559384 SHROOM4Q9ULL8 1493 aa12.75□□□□□ -0.37
CHSY1-203ENST00000559384 CC2D2AQ9P2K1 1620 aa12.74□□□□□ -0.37
CHSY1-203ENST00000559384 CECR2Q9BXF3 1484 aa12.7□□□□□ -0.38
CHSY1-203ENST00000559384 EIF4G1Q04637 1599 aaKnown RBP12.67□□□□□ -0.38
CHSY1-203ENST00000559384 DNAJC5Q9H3Z4 198 aa12.3□□□□□ -0.44
CHSY1-203ENST00000559384 NCAPD3P42695 1498 aa12.21□□□□□ -0.46
CHSY1-203ENST00000559384 ERCC6Q03468 1493 aa12.18□□□□□ -0.46
CHSY1-203ENST00000559384 CUX2O14529 1486 aa12.17□□□□□ -0.46
CHSY1-203ENST00000559384 ATAD2BQ9ULI0 1458 aa12.16□□□□□ -0.46
CHSY1-203ENST00000559384 SMARCA4P51532 1647 aa12.15□□□□□ -0.47
CHSY1-203ENST00000559384 SMARCA2P51531 1590 aa12.13□□□□□ -0.47
CHSY1-203ENST00000559384 HMGXB3Q12766 1538 aa12.11□□□□□ -0.47
CHSY1-203ENST00000559384 NESP48681 1621 aa12.09□□□□□ -0.47
CHSY1-203ENST00000559384 BAZ1AQ9NRL2 1556 aaPredicted RBP12.05□□□□□ -0.48
CHSY1-203ENST00000559384 PLPPR3Q6T4P5 718 aa12.05□□□□□ -0.48
CHSY1-203ENST00000559384 BAZ1BQ9UIG0 1483 aaKnown RBP12.05□□□□□ -0.48
CHSY1-203ENST00000559384 FOXD1Q16676 465 aa12.03□□□□□ -0.48
CHSY1-203ENST00000559384 PEG3Q9GZU2 1588 aa12.01□□□□□ -0.49
CHSY1-203ENST00000559384 THOC2Q8NI27 1593 aaKnown RBP11.98□□□□□ -0.49
CHSY1-203ENST00000559384 MROH2BQ7Z745 1585 aa11.97□□□□□ -0.49
CHSY1-203ENST00000559384 LAMC3Q9Y6N6 1575 aa11.97□□□□□ -0.49
CHSY1-203ENST00000559384 KIF21AQ7Z4S6 1674 aa11.96□□□□□ -0.5
CHSY1-203ENST00000559384 PDS5BQ9NTI5 1447 aa11.89□□□□□ -0.51
CHSY1-203ENST00000559384 WIZO95785 1651 aa11.85□□□□□ -0.51
CHSY1-203ENST00000559384 CADPSQ9ULU8 1353 aa11.83□□□□□ -0.52
CHSY1-203ENST00000559384 MRC2Q9UBG0 1479 aa11.81□□□□□ -0.52
CHSY1-203ENST00000559384 WDR62O43379 1518 aa11.77□□□□□ -0.52
CHSY1-203ENST00000559384 TRIM41Q8WV44 630 aa11.75□□□□□ -0.53
CHSY1-203ENST00000559384 CEP164Q9UPV0 1460 aa11.74□□□□□ -0.53
CHSY1-203ENST00000559384 FANCD2Q9BXW9 1451 aa11.71□□□□□ -0.53
CHSY1-203ENST00000559384 CFTRP13569 1480 aa11.68□□□□□ -0.54
CHSY1-203ENST00000559384 RSF1Q96T23 1441 aaPredicted RBP11.67□□□□□ -0.54
CHSY1-203ENST00000559384 TOP2AP11388 1531 aaKnown RBP11.65□□□□□ -0.54
CHSY1-203ENST00000559384 URB2Q14146 1524 aaKnown RBP11.63□□□□□ -0.55
CHSY1-203ENST00000559384 PRDM2Q13029 1718 aa11.62□□□□□ -0.55
CHSY1-203ENST00000559384 OSCARQ8IYS5 282 aa11.61□□□□□ -0.55
CHSY1-203ENST00000559384 ADRA2BP18089 450 aa11.59□□□□□ -0.55
CHSY1-203ENST00000559384 PPP6R1Q9UPN7 881 aa11.56□□□□□ -0.56
CHSY1-203ENST00000559384 CCDC88BA6NC98 1476 aa11.53□□□□□ -0.56
CHSY1-203ENST00000559384 ZNF608Q9ULD9 1512 aaPredicted RBP11.51□□□□□ -0.57
CHSY1-203ENST00000559384 IFT140Q96RY7 1462 aa11.5□□□□□ -0.57
CHSY1-203ENST00000559384 RIMBP3CA6NJZ7 1639 aa11.49□□□□□ -0.57
CHSY1-203ENST00000559384 RIMBP3BA6NNM3 1639 aa11.49□□□□□ -0.57
CHSY1-203ENST00000559384 RIMBP3Q9UFD9 1639 aa11.49□□□□□ -0.57
CHSY1-203ENST00000559384 TOPBP1Q92547 1522 aa11.49□□□□□ -0.57
CHSY1-203ENST00000559384 EIF4G3O43432 1585 aaKnown RBP11.45□□□□□ -0.58
CHSY1-203ENST00000559384 DNMBPQ6XZF7 1577 aa11.44□□□□□ -0.58
CHSY1-203ENST00000559384 ABCC8Q09428 1581 aa11.43□□□□□ -0.58
CHSY1-203ENST00000559384 ARHGEF11O15085 1522 aa11.43□□□□□ -0.58
CHSY1-203ENST00000559384 CHD1O14646 1710 aa11.42□□□□□ -0.58
CHSY1-203ENST00000559384 TARBP1Q13395 1621 aaKnown RBP11.4□□□□□ -0.58
CHSY1-203ENST00000559384 AQRO60306 1485 aaKnown RBP eCLIP11.39□□□□□ -0.59
CHSY1-203ENST00000559384 PIAS4Q8N2W9 510 aaPredicted RBP11.39□□□□□ -0.59
CHSY1-203ENST00000559384 FBLN2P98095 1184 aa11.36□□□□□ -0.59
CHSY1-203ENST00000559384 CYB5RLQ6IPT4 315 aa11.36□□□□□ -0.59
CHSY1-203ENST00000559384 POLA1P09884 1462 aaPredicted RBP11.36□□□□□ -0.59
CHSY1-203ENST00000559384 RAD54L2Q9Y4B4 1467 aa11.32□□□□□ -0.6
CHSY1-203ENST00000559384 ARAP1Q96P48 1450 aa11.32□□□□□ -0.6
CHSY1-203ENST00000559384 SOGA1O94964 1423 aa11.31□□□□□ -0.6
CHSY1-203ENST00000559384 TDRD9Q8NDG6 1382 aaKnown RBP11.3□□□□□ -0.6
CHSY1-203ENST00000559384 FGD5Q6ZNL6 1462 aa11.28□□□□□ -0.6
CHSY1-203ENST00000559384 TRHP20396 242 aaPredicted RBP11.28□□□□□ -0.6
CHSY1-203ENST00000559384 SNAPC4Q5SXM2 1469 aa11.27□□□□□ -0.6
CHSY1-203ENST00000559384 CUX1P39880 1505 aa11.25□□□□□ -0.61
CHSY1-203ENST00000559384 WDR97A6NE52 1622 aa11.25□□□□□ -0.61
CHSY1-203ENST00000559384 CHMP7Q8WUX9 453 aaPredicted RBP11.24□□□□□ -0.61
CHSY1-203ENST00000559384 CLASP1Q7Z460 1538 aa11.24□□□□□ -0.61
CHSY1-203ENST00000559384 SYNJ1O43426 1573 aa11.22□□□□□ -0.61
CHSY1-203ENST00000559384 MAGI1Q96QZ7 1491 aaPredicted RBP11.22□□□□□ -0.61
CHSY1-203ENST00000559384 PBRM1Q86U86 1689 aa11.21□□□□□ -0.61
CHSY1-203ENST00000559384 GRIN2BQ13224 1484 aa11.21□□□□□ -0.61
CHSY1-203ENST00000559384 SYNJ2O15056 1496 aa11.19□□□□□ -0.62
CHSY1-203ENST00000559384 GAPVD1Q14C86 1478 aa11.17□□□□□ -0.62
CHSY1-203ENST00000559384 ABCA5Q8WWZ7 1642 aa11.14□□□□□ -0.63
CHSY1-203ENST00000559384 ABCA10Q8WWZ4 1543 aa11.13□□□□□ -0.63
CHSY1-203ENST00000559384 MSH5O43196 834 aa11.11□□□□□ -0.63
CHSY1-203ENST00000559384 SUPT5HO00267 1087 aaKnown RBP11.1□□□□□ -0.63
CHSY1-203ENST00000559384 ERCC6L2Q5T890 1561 aa11.07□□□□□ -0.64
CHSY1-203ENST00000559384 GRIN2AQ12879 1464 aa11.07□□□□□ -0.64
CHSY1-203ENST00000559384 WRNQ14191 1432 aaPredicted RBP eCLIP11.07□□□□□ -0.64
CHSY1-203ENST00000559384 ADAMTS12P58397 1594 aa11.06□□□□□ -0.64
CHSY1-203ENST00000559384 CEP170Q5SW79 1584 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms