RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 NISCHQ9Y2I1 1504 aa41.19■■■■■ 4.18
CDC42BPB-205ENST00000559245 ABCC9O60706 1549 aa37.3■■■■□ 3.56
CDC42BPB-205ENST00000559245 CCDC180Q9P1Z9 1646 aa37.14■■■■□ 3.54
CDC42BPB-205ENST00000559245 RB1CC1Q8TDY2 1594 aa35.42■■■■□ 3.26
CDC42BPB-205ENST00000559245 DNAJC5BQ9UF47 199 aa35.18■■■■□ 3.22
CDC42BPB-205ENST00000559245 NACADO15069 1562 aa35.12■■■■□ 3.21
CDC42BPB-205ENST00000559245 DCAF8L2P0C7V8 631 aa34.84■■■■□ 3.17
CDC42BPB-205ENST00000559245 UNC13AQ9UPW8 1703 aa34.74■■■■□ 3.15
CDC42BPB-205ENST00000559245 PABPN1Q86U42 306 aaKnown RBP eCLIP34.66■■■■□ 3.14
CDC42BPB-205ENST00000559245 MYO15BQ96JP2 1530 aa34.53■■■■□ 3.12
CDC42BPB-205ENST00000559245 BICRAQ9NZM4 1560 aa34.41■■■■□ 3.1
CDC42BPB-205ENST00000559245 ZCCHC6Q5VYS8 1495 aaKnown RBP34.08■■■■□ 3.05
CDC42BPB-205ENST00000559245 DCAF1Q9Y4B6 1507 aa34■■■■□ 3.03
CDC42BPB-205ENST00000559245 SHROOM4Q9ULL8 1493 aa33.88■■■■□ 3.01
CDC42BPB-205ENST00000559245 SCRIBQ14160 1630 aa33.79■■■■□ 3
CDC42BPB-205ENST00000559245 CC2D2AQ9P2K1 1620 aa33.72■■■□□ 2.99
CDC42BPB-205ENST00000559245 CECR2Q9BXF3 1484 aa33.63■■■□□ 2.97
CDC42BPB-205ENST00000559245 EIF4G1Q04637 1599 aaKnown RBP33.57■■■□□ 2.96
CDC42BPB-205ENST00000559245 DNAJC5Q9H3Z4 198 aa32.48■■■□□ 2.79
CDC42BPB-205ENST00000559245 NCAPD3P42695 1498 aa32.39■■■□□ 2.78
CDC42BPB-205ENST00000559245 ATAD2BQ9ULI0 1458 aa32.26■■■□□ 2.75
CDC42BPB-205ENST00000559245 CUX2O14529 1486 aa32.25■■■□□ 2.75
CDC42BPB-205ENST00000559245 ERCC6Q03468 1493 aa32.23■■■□□ 2.75
CDC42BPB-205ENST00000559245 SMARCA4P51532 1647 aa32.22■■■□□ 2.75
CDC42BPB-205ENST00000559245 SMARCA2P51531 1590 aa32.19■■■□□ 2.74
CDC42BPB-205ENST00000559245 HMGXB3Q12766 1538 aa32.16■■■□□ 2.74
CDC42BPB-205ENST00000559245 BAZ1AQ9NRL2 1556 aaPredicted RBP31.99■■■□□ 2.71
CDC42BPB-205ENST00000559245 NESP48681 1621 aa31.98■■■□□ 2.71
CDC42BPB-205ENST00000559245 BAZ1BQ9UIG0 1483 aaKnown RBP31.95■■■□□ 2.7
CDC42BPB-205ENST00000559245 PEG3Q9GZU2 1588 aa31.89■■■□□ 2.7
CDC42BPB-205ENST00000559245 MROH2BQ7Z745 1585 aa31.74■■■□□ 2.67
CDC42BPB-205ENST00000559245 THOC2Q8NI27 1593 aaKnown RBP31.74■■■□□ 2.67
CDC42BPB-205ENST00000559245 LAMC3Q9Y6N6 1575 aa31.74■■■□□ 2.67
CDC42BPB-205ENST00000559245 KIF21AQ7Z4S6 1674 aa31.65■■■□□ 2.66
CDC42BPB-205ENST00000559245 PDS5BQ9NTI5 1447 aa31.52■■■□□ 2.64
CDC42BPB-205ENST00000559245 WIZO95785 1651 aa31.39■■■□□ 2.62
CDC42BPB-205ENST00000559245 CADPSQ9ULU8 1353 aa31.38■■■□□ 2.61
CDC42BPB-205ENST00000559245 MRC2Q9UBG0 1479 aa31.28■■■□□ 2.6
CDC42BPB-205ENST00000559245 WDR62O43379 1518 aa31.23■■■□□ 2.59
CDC42BPB-205ENST00000559245 CEP164Q9UPV0 1460 aa31.11■■■□□ 2.57
CDC42BPB-205ENST00000559245 FANCD2Q9BXW9 1451 aa31.05■■■□□ 2.56
CDC42BPB-205ENST00000559245 CFTRP13569 1480 aa30.99■■■□□ 2.55
CDC42BPB-205ENST00000559245 TRIM41Q8WV44 630 aa30.96■■■□□ 2.55
CDC42BPB-205ENST00000559245 RSF1Q96T23 1441 aaPredicted RBP30.96■■■□□ 2.55
CDC42BPB-205ENST00000559245 TOP2AP11388 1531 aaKnown RBP30.94■■■□□ 2.54
CDC42BPB-205ENST00000559245 URB2Q14146 1524 aaKnown RBP30.82■■■□□ 2.52
CDC42BPB-205ENST00000559245 PRDM2Q13029 1718 aa30.81■■■□□ 2.52
CDC42BPB-205ENST00000559245 OSCARQ8IYS5 282 aa30.71■■■□□ 2.51
CDC42BPB-205ENST00000559245 CCDC88BA6NC98 1476 aa30.57■■■□□ 2.48
CDC42BPB-205ENST00000559245 IFT140Q96RY7 1462 aa30.49■■■□□ 2.47
CDC42BPB-205ENST00000559245 ZNF608Q9ULD9 1512 aaPredicted RBP30.47■■■□□ 2.47
CDC42BPB-205ENST00000559245 TOPBP1Q92547 1522 aa30.44■■■□□ 2.46
CDC42BPB-205ENST00000559245 RIMBP3CA6NJZ7 1639 aa30.41■■■□□ 2.46
CDC42BPB-205ENST00000559245 RIMBP3BA6NNM3 1639 aa30.41■■■□□ 2.46
CDC42BPB-205ENST00000559245 RIMBP3Q9UFD9 1639 aa30.41■■■□□ 2.46
CDC42BPB-205ENST00000559245 ABCC8Q09428 1581 aa30.36■■■□□ 2.45
CDC42BPB-205ENST00000559245 EIF4G3O43432 1585 aaKnown RBP30.33■■■□□ 2.45
CDC42BPB-205ENST00000559245 DNMBPQ6XZF7 1577 aa30.33■■■□□ 2.45
CDC42BPB-205ENST00000559245 ARHGEF11O15085 1522 aa30.25■■■□□ 2.43
CDC42BPB-205ENST00000559245 TARBP1Q13395 1621 aaKnown RBP30.22■■■□□ 2.43
CDC42BPB-205ENST00000559245 CHD1O14646 1710 aa30.21■■■□□ 2.43
CDC42BPB-205ENST00000559245 AQRO60306 1485 aaKnown RBP eCLIP30.16■■■□□ 2.424e-6■■□□□ 13.1
CDC42BPB-205ENST00000559245 POLA1P09884 1462 aaPredicted RBP30.12■■■□□ 2.41
CDC42BPB-205ENST00000559245 CYB5RLQ6IPT4 315 aa30.02■■■□□ 2.4
CDC42BPB-205ENST00000559245 RAD54L2Q9Y4B4 1467 aa30■■■□□ 2.39
CDC42BPB-205ENST00000559245 FBLN2P98095 1184 aa30■■■□□ 2.39
CDC42BPB-205ENST00000559245 SOGA1O94964 1423 aa29.96■■■□□ 2.39
CDC42BPB-205ENST00000559245 ARAP1Q96P48 1450 aa29.93■■■□□ 2.38
CDC42BPB-205ENST00000559245 TDRD9Q8NDG6 1382 aaKnown RBP29.92■■■□□ 2.38
CDC42BPB-205ENST00000559245 WDR97A6NE52 1622 aa29.89■■■□□ 2.38
CDC42BPB-205ENST00000559245 FGD5Q6ZNL6 1462 aa29.89■■■□□ 2.38
CDC42BPB-205ENST00000559245 SNAPC4Q5SXM2 1469 aa29.86■■■□□ 2.37
CDC42BPB-205ENST00000559245 CUX1P39880 1505 aa29.83■■■□□ 2.37
CDC42BPB-205ENST00000559245 CLASP1Q7Z460 1538 aa29.78■■■□□ 2.36
CDC42BPB-205ENST00000559245 MAGI1Q96QZ7 1491 aaPredicted RBP29.77■■■□□ 2.36
CDC42BPB-205ENST00000559245 TRHP20396 242 aaPredicted RBP29.76■■■□□ 2.35
CDC42BPB-205ENST00000559245 SYNJ1O43426 1573 aa29.75■■■□□ 2.35
CDC42BPB-205ENST00000559245 GRIN2BQ13224 1484 aa29.74■■■□□ 2.35
CDC42BPB-205ENST00000559245 CHMP7Q8WUX9 453 aaPredicted RBP29.73■■■□□ 2.35
CDC42BPB-205ENST00000559245 PBRM1Q86U86 1689 aa29.7■■■□□ 2.35
CDC42BPB-205ENST00000559245 SYNJ2O15056 1496 aa29.67■■■□□ 2.34
CDC42BPB-205ENST00000559245 GAPVD1Q14C86 1478 aa29.6■■■□□ 2.33
CDC42BPB-205ENST00000559245 ABCA5Q8WWZ7 1642 aa29.56■■■□□ 2.32
CDC42BPB-205ENST00000559245 ABCA10Q8WWZ4 1543 aa29.54■■■□□ 2.32
CDC42BPB-205ENST00000559245 SUPT5HO00267 1087 aaKnown RBP29.41■■■□□ 2.3
CDC42BPB-205ENST00000559245 GRIN2AQ12879 1464 aa29.36■■■□□ 2.29
CDC42BPB-205ENST00000559245 WRNQ14191 1432 aaPredicted RBP eCLIP29.35■■■□□ 2.29
CDC42BPB-205ENST00000559245 BIVM-ERCC5R4GMW8 1640 aa29.34■■■□□ 2.29
CDC42BPB-205ENST00000559245 ADAMTS12P58397 1594 aa29.34■■■□□ 2.29
CDC42BPB-205ENST00000559245 TOP2BQ02880 1626 aa29.31■■■□□ 2.28
CDC42BPB-205ENST00000559245 ERCC6L2Q5T890 1561 aa29.31■■■□□ 2.28
CDC42BPB-205ENST00000559245 CEP170Q5SW79 1584 aa29.29■■■□□ 2.28
CDC42BPB-205ENST00000559245 NUP160Q12769 1436 aa29.26■■■□□ 2.27
CDC42BPB-205ENST00000559245 SHROOM2Q13796 1616 aa29.21■■■□□ 2.27
CDC42BPB-205ENST00000559245 FHAD1B1AJZ9 1412 aa29.2■■■□□ 2.27
CDC42BPB-205ENST00000559245 ERICH3Q5RHP9 1530 aa29.17■■■□□ 2.26
CDC42BPB-205ENST00000559245 AEBP2Q6ZN18 517 aaPredicted RBP29.07■■■□□ 2.24
CDC42BPB-205ENST00000559245 KIF13AQ9H1H9 1805 aa29.01■■■□□ 2.24
CDC42BPB-205ENST00000559245 PRG4Q92954 1404 aaPredicted RBP29■■■□□ 2.23
CDC42BPB-205ENST00000559245 JPH4Q96JJ6 628 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms