RNA–Protein interactions for RNA: ENST00000559218.1

CLPX-205, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 4

Gene CLPX, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-205ENST00000559218 NISCHQ9Y2I1 1504 aa21.87■■□□□ 1.09
CLPX-205ENST00000559218 AEBP2Q6ZN18 517 aaPredicted RBP21.44■■□□□ 1.02
CLPX-205ENST00000559218 CHIC1Q5VXU3 224 aa20.57■□□□□ 0.88
CLPX-205ENST00000559218 ABCC9O60706 1549 aa19.85■□□□□ 0.77
CLPX-205ENST00000559218 CCDC180Q9P1Z9 1646 aa19.61■□□□□ 0.73
CLPX-205ENST00000559218 DNAJC5BQ9UF47 199 aa18.8■□□□□ 0.6
CLPX-205ENST00000559218 RB1CC1Q8TDY2 1594 aa18.76■□□□□ 0.59
CLPX-205ENST00000559218 NACADO15069 1562 aa18.6■□□□□ 0.57
CLPX-205ENST00000559218 DCAF8L2P0C7V8 631 aa18.58■□□□□ 0.56
CLPX-205ENST00000559218 SENP3Q9H4L4 574 aaPredicted RBP18.55■□□□□ 0.56
CLPX-205ENST00000559218 PABPN1Q86U42 306 aaKnown RBP eCLIP18.5■□□□□ 0.55
CLPX-205ENST00000559218 UNC13AQ9UPW8 1703 aa18.3■□□□□ 0.52
CLPX-205ENST00000559218 MYO15BQ96JP2 1530 aa18.29■□□□□ 0.52
CLPX-205ENST00000559218 BICRAQ9NZM4 1560 aa18.26■□□□□ 0.51
CLPX-205ENST00000559218 PHF23Q9BUL5 403 aaPredicted RBP18.18■□□□□ 0.5
CLPX-205ENST00000559218 ZCCHC6Q5VYS8 1495 aaKnown RBP18.1■□□□□ 0.49
CLPX-205ENST00000559218 DCAF1Q9Y4B6 1507 aa18.03■□□□□ 0.48
CLPX-205ENST00000559218 SHROOM4Q9ULL8 1493 aa17.95■□□□□ 0.46
CLPX-205ENST00000559218 SCRIBQ14160 1630 aa17.94■□□□□ 0.46
CLPX-205ENST00000559218 CC2D2AQ9P2K1 1620 aa17.88■□□□□ 0.45
CLPX-205ENST00000559218 CECR2Q9BXF3 1484 aa17.88■□□□□ 0.45
CLPX-205ENST00000559218 EIF4G1Q04637 1599 aaKnown RBP17.81■□□□□ 0.44
CLPX-205ENST00000559218 DNAJC5Q9H3Z4 198 aa17.3■□□□□ 0.36
CLPX-205ENST00000559218 NCAPD3P42695 1498 aa17.22■□□□□ 0.35
CLPX-205ENST00000559218 ATAD2BQ9ULI0 1458 aa17.16■□□□□ 0.34
CLPX-205ENST00000559218 ERCC6Q03468 1493 aa17.12■□□□□ 0.33
CLPX-205ENST00000559218 CUX2O14529 1486 aa17.11■□□□□ 0.33
CLPX-205ENST00000559218 FOXD1Q16676 465 aa17.1■□□□□ 0.33
CLPX-205ENST00000559218 SMARCA4P51532 1647 aa17.07■□□□□ 0.32
CLPX-205ENST00000559218 SMARCA2P51531 1590 aa17.05■□□□□ 0.32
CLPX-205ENST00000559218 HMGXB3Q12766 1538 aa17.04■□□□□ 0.32
CLPX-205ENST00000559218 NESP48681 1621 aa17.03■□□□□ 0.32
CLPX-205ENST00000559218 BAZ1BQ9UIG0 1483 aaKnown RBP16.97■□□□□ 0.31
CLPX-205ENST00000559218 BAZ1AQ9NRL2 1556 aaPredicted RBP16.96■□□□□ 0.31
CLPX-205ENST00000559218 PEG3Q9GZU2 1588 aa16.89■□□□□ 0.3
CLPX-205ENST00000559218 MROH2BQ7Z745 1585 aa16.88■□□□□ 0.29
CLPX-205ENST00000559218 THOC2Q8NI27 1593 aaKnown RBP16.82■□□□□ 0.28
CLPX-205ENST00000559218 LAMC3Q9Y6N6 1575 aa16.8■□□□□ 0.28
CLPX-205ENST00000559218 PDS5BQ9NTI5 1447 aa16.74■□□□□ 0.27
CLPX-205ENST00000559218 KIF21AQ7Z4S6 1674 aa16.72■□□□□ 0.27
CLPX-205ENST00000559218 CADPSQ9ULU8 1353 aa16.7■□□□□ 0.26
CLPX-205ENST00000559218 WIZO95785 1651 aa16.64■□□□□ 0.25
CLPX-205ENST00000559218 MRC2Q9UBG0 1479 aa16.61■□□□□ 0.25
CLPX-205ENST00000559218 WDR62O43379 1518 aa16.56■□□□□ 0.24
CLPX-205ENST00000559218 PLPPR3Q6T4P5 718 aa16.55■□□□□ 0.24
CLPX-205ENST00000559218 CEP164Q9UPV0 1460 aa16.51■□□□□ 0.23
CLPX-205ENST00000559218 TRIM41Q8WV44 630 aa16.51■□□□□ 0.23
CLPX-205ENST00000559218 FANCD2Q9BXW9 1451 aa16.5■□□□□ 0.23
CLPX-205ENST00000559218 RSF1Q96T23 1441 aaPredicted RBP16.49■□□□□ 0.23
CLPX-205ENST00000559218 CFTRP13569 1480 aa16.47■□□□□ 0.23
CLPX-205ENST00000559218 TOP2AP11388 1531 aaKnown RBP16.41■□□□□ 0.22
CLPX-205ENST00000559218 URB2Q14146 1524 aaKnown RBP16.39■□□□□ 0.21
CLPX-205ENST00000559218 OSCARQ8IYS5 282 aa16.34■□□□□ 0.21
CLPX-205ENST00000559218 CCDC88BA6NC98 1476 aa16.27■□□□□ 0.19
CLPX-205ENST00000559218 ZNF608Q9ULD9 1512 aaPredicted RBP16.22■□□□□ 0.19
CLPX-205ENST00000559218 MSH5O43196 834 aa16.21■□□□□ 0.19
CLPX-205ENST00000559218 IFT140Q96RY7 1462 aa16.19■□□□□ 0.18
CLPX-205ENST00000559218 PRDM2Q13029 1718 aa16.18■□□□□ 0.18
CLPX-205ENST00000559218 TOPBP1Q92547 1522 aa16.17■□□□□ 0.18
CLPX-205ENST00000559218 RIMBP3CA6NJZ7 1639 aa16.11■□□□□ 0.17
CLPX-205ENST00000559218 RIMBP3BA6NNM3 1639 aa16.11■□□□□ 0.17
CLPX-205ENST00000559218 RIMBP3Q9UFD9 1639 aa16.11■□□□□ 0.17
CLPX-205ENST00000559218 PIAS4Q8N2W9 510 aaPredicted RBP16.09■□□□□ 0.17
CLPX-205ENST00000559218 ABCC8Q09428 1581 aa16.08■□□□□ 0.16
CLPX-205ENST00000559218 DNMBPQ6XZF7 1577 aa16.08■□□□□ 0.16
CLPX-205ENST00000559218 ARHGEF11O15085 1522 aa16.07■□□□□ 0.16
CLPX-205ENST00000559218 EIF4G3O43432 1585 aaKnown RBP16.07■□□□□ 0.16
CLPX-205ENST00000559218 AQRO60306 1485 aaKnown RBP eCLIP16.06■□□□□ 0.16
CLPX-205ENST00000559218 TARBP1Q13395 1621 aaKnown RBP16.02■□□□□ 0.16
CLPX-205ENST00000559218 POLA1P09884 1462 aaPredicted RBP16■□□□□ 0.15
CLPX-205ENST00000559218 CYB5RLQ6IPT4 315 aa15.99■□□□□ 0.15
CLPX-205ENST00000559218 FBLN2P98095 1184 aa15.98■□□□□ 0.15
CLPX-205ENST00000559218 RAD54L2Q9Y4B4 1467 aa15.97■□□□□ 0.15
CLPX-205ENST00000559218 CHD1O14646 1710 aa15.95■□□□□ 0.14
CLPX-205ENST00000559218 TDRD9Q8NDG6 1382 aaKnown RBP15.95■□□□□ 0.14
CLPX-205ENST00000559218 SOGA1O94964 1423 aa15.94■□□□□ 0.14
CLPX-205ENST00000559218 ARAP1Q96P48 1450 aa15.91■□□□□ 0.14
CLPX-205ENST00000559218 ADRA2BP18089 450 aa15.91■□□□□ 0.14
CLPX-205ENST00000559218 PPP6R1Q9UPN7 881 aa15.91■□□□□ 0.14
CLPX-205ENST00000559218 FGD5Q6ZNL6 1462 aa15.89■□□□□ 0.13
CLPX-205ENST00000559218 SNAPC4Q5SXM2 1469 aa15.87■□□□□ 0.13
CLPX-205ENST00000559218 CUX1P39880 1505 aa15.86■□□□□ 0.13
CLPX-205ENST00000559218 TRHP20396 242 aaPredicted RBP15.84■□□□□ 0.13
CLPX-205ENST00000559218 CHMP7Q8WUX9 453 aaPredicted RBP15.82■□□□□ 0.12
CLPX-205ENST00000559218 CLASP1Q7Z460 1538 aa15.8■□□□□ 0.12
CLPX-205ENST00000559218 GRIN2BQ13224 1484 aa15.79■□□□□ 0.12
CLPX-205ENST00000559218 MAGI1Q96QZ7 1491 aaPredicted RBP15.79■□□□□ 0.12
CLPX-205ENST00000559218 WDR97A6NE52 1622 aa15.79■□□□□ 0.12
CLPX-205ENST00000559218 SYNJ2O15056 1496 aa15.76■□□□□ 0.11
CLPX-205ENST00000559218 SYNJ1O43426 1573 aa15.75■□□□□ 0.11
CLPX-205ENST00000559218 GAPVD1Q14C86 1478 aa15.72■□□□□ 0.11
CLPX-205ENST00000559218 SUPT5HO00267 1087 aaKnown RBP15.69■□□□□ 0.1
CLPX-205ENST00000559218 ABCA10Q8WWZ4 1543 aa15.68■□□□□ 0.1
CLPX-205ENST00000559218 PBRM1Q86U86 1689 aa15.67■□□□□ 0.1
CLPX-205ENST00000559218 ABCA5Q8WWZ7 1642 aa15.65■□□□□ 0.1
CLPX-205ENST00000559218 WRNQ14191 1432 aaPredicted RBP eCLIP15.6■□□□□ 0.09
CLPX-205ENST00000559218 GRIN2AQ12879 1464 aa15.59■□□□□ 0.09
CLPX-205ENST00000559218 ERCC6L2Q5T890 1561 aa15.59■□□□□ 0.09
CLPX-205ENST00000559218 POTEDQ86YR6 584 aa15.56■□□□□ 0.08
CLPX-205ENST00000559218 ADAMTS12P58397 1594 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms