RNA–Protein interactions for RNA: ENST00000559212.1

PCAT29-203, prostate cancer associated transcript 29, humanhuman

TSL 3 BASIC

Gene PCAT29, Length 647 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-203ENST00000559212 NISCHQ9Y2I1 1504 aa26.49■■□□□ 1.83
PCAT29-203ENST00000559212 CCDC180Q9P1Z9 1646 aa23.81■■□□□ 1.4
PCAT29-203ENST00000559212 ABCC9O60706 1549 aa23.77■■□□□ 1.4
PCAT29-203ENST00000559212 RB1CC1Q8TDY2 1594 aa22.65■■□□□ 1.22
PCAT29-203ENST00000559212 NACADO15069 1562 aa22.49■■□□□ 1.19
PCAT29-203ENST00000559212 DCAF8L2P0C7V8 631 aa22.38■■□□□ 1.17
PCAT29-203ENST00000559212 DNAJC5BQ9UF47 199 aa22.25■■□□□ 1.15
PCAT29-203ENST00000559212 MYO15BQ96JP2 1530 aa22.17■■□□□ 1.14
PCAT29-203ENST00000559212 UNC13AQ9UPW8 1703 aa22.14■■□□□ 1.13
PCAT29-203ENST00000559212 PABPN1Q86U42 306 aaKnown RBP eCLIP22.12■■□□□ 1.13
PCAT29-203ENST00000559212 ZCCHC6Q5VYS8 1495 aaKnown RBP21.96■■□□□ 1.11
PCAT29-203ENST00000559212 BICRAQ9NZM4 1560 aa21.96■■□□□ 1.11
PCAT29-203ENST00000559212 DCAF1Q9Y4B6 1507 aa21.89■■□□□ 1.09
PCAT29-203ENST00000559212 SHROOM4Q9ULL8 1493 aa21.69■■□□□ 1.06
PCAT29-203ENST00000559212 SCRIBQ14160 1630 aa21.69■■□□□ 1.06
PCAT29-203ENST00000559212 CC2D2AQ9P2K1 1620 aa21.48■■□□□ 1.03
PCAT29-203ENST00000559212 EIF4G1Q04637 1599 aaKnown RBP21.44■■□□□ 1.02
PCAT29-203ENST00000559212 CECR2Q9BXF3 1484 aa21.42■■□□□ 1.02
PCAT29-203ENST00000559212 NCAPD3P42695 1498 aa20.74■□□□□ 0.91
PCAT29-203ENST00000559212 ATAD2BQ9ULI0 1458 aa20.69■□□□□ 0.9
PCAT29-203ENST00000559212 SMARCA4P51532 1647 aa20.68■□□□□ 0.9
PCAT29-203ENST00000559212 SMARCA2P51531 1590 aa20.64■□□□□ 0.9
PCAT29-203ENST00000559212 HMGXB3Q12766 1538 aa20.61■□□□□ 0.89
PCAT29-203ENST00000559212 BAZ1AQ9NRL2 1556 aaPredicted RBP20.59■□□□□ 0.89
PCAT29-203ENST00000559212 ERCC6Q03468 1493 aa20.55■□□□□ 0.88
PCAT29-203ENST00000559212 BAZ1BQ9UIG0 1483 aaKnown RBP20.5■□□□□ 0.87
PCAT29-203ENST00000559212 CUX2O14529 1486 aa20.5■□□□□ 0.87
PCAT29-203ENST00000559212 PEG3Q9GZU2 1588 aa20.47■□□□□ 0.87
PCAT29-203ENST00000559212 DNAJC5Q9H3Z4 198 aa20.45■□□□□ 0.86
PCAT29-203ENST00000559212 MROH2BQ7Z745 1585 aa20.42■□□□□ 0.86
PCAT29-203ENST00000559212 NESP48681 1621 aa20.42■□□□□ 0.86
PCAT29-203ENST00000559212 LAMC3Q9Y6N6 1575 aa20.3■□□□□ 0.84
PCAT29-203ENST00000559212 THOC2Q8NI27 1593 aaKnown RBP20.22■□□□□ 0.83
PCAT29-203ENST00000559212 WIZO95785 1651 aa20.19■□□□□ 0.82
PCAT29-203ENST00000559212 KIF21AQ7Z4S6 1674 aa20.19■□□□□ 0.82
PCAT29-203ENST00000559212 PDS5BQ9NTI5 1447 aa20.18■□□□□ 0.82
PCAT29-203ENST00000559212 CADPSQ9ULU8 1353 aa20.11■□□□□ 0.81
PCAT29-203ENST00000559212 MRC2Q9UBG0 1479 aa20■□□□□ 0.79
PCAT29-203ENST00000559212 RSF1Q96T23 1441 aaPredicted RBP19.99■□□□□ 0.79
PCAT29-203ENST00000559212 WDR62O43379 1518 aa19.95■□□□□ 0.78
PCAT29-203ENST00000559212 TOP2AP11388 1531 aaKnown RBP19.93■□□□□ 0.78
PCAT29-203ENST00000559212 CEP164Q9UPV0 1460 aa19.92■□□□□ 0.78
PCAT29-203ENST00000559212 FANCD2Q9BXW9 1451 aa19.9■□□□□ 0.78
PCAT29-203ENST00000559212 CFTRP13569 1480 aa19.89■□□□□ 0.77
PCAT29-203ENST00000559212 PRDM2Q13029 1718 aa19.73■□□□□ 0.75
PCAT29-203ENST00000559212 URB2Q14146 1524 aaKnown RBP19.72■□□□□ 0.75
PCAT29-203ENST00000559212 CCDC88BA6NC98 1476 aa19.69■□□□□ 0.74
PCAT29-203ENST00000559212 TRIM41Q8WV44 630 aa19.58■□□□□ 0.72
PCAT29-203ENST00000559212 OSCARQ8IYS5 282 aa19.56■□□□□ 0.72
PCAT29-203ENST00000559212 IFT140Q96RY7 1462 aa19.53■□□□□ 0.72
PCAT29-203ENST00000559212 TOPBP1Q92547 1522 aa19.52■□□□□ 0.72
PCAT29-203ENST00000559212 ABCC8Q09428 1581 aa19.49■□□□□ 0.71
PCAT29-203ENST00000559212 ZNF608Q9ULD9 1512 aaPredicted RBP19.47■□□□□ 0.71
PCAT29-203ENST00000559212 DNMBPQ6XZF7 1577 aa19.46■□□□□ 0.71
PCAT29-203ENST00000559212 EIF4G3O43432 1585 aaKnown RBP19.4■□□□□ 0.7
PCAT29-203ENST00000559212 TARBP1Q13395 1621 aaKnown RBP19.35■□□□□ 0.69
PCAT29-203ENST00000559212 POLA1P09884 1462 aaPredicted RBP19.32■□□□□ 0.68
PCAT29-203ENST00000559212 RIMBP3CA6NJZ7 1639 aa19.31■□□□□ 0.68
PCAT29-203ENST00000559212 RIMBP3BA6NNM3 1639 aa19.31■□□□□ 0.68
PCAT29-203ENST00000559212 RIMBP3Q9UFD9 1639 aa19.31■□□□□ 0.68
PCAT29-203ENST00000559212 AQRO60306 1485 aaKnown RBP eCLIP19.3■□□□□ 0.68
PCAT29-203ENST00000559212 CHD1O14646 1710 aa19.25■□□□□ 0.67
PCAT29-203ENST00000559212 RAD54L2Q9Y4B4 1467 aa19.24■□□□□ 0.67
PCAT29-203ENST00000559212 ARHGEF11O15085 1522 aa19.24■□□□□ 0.67
PCAT29-203ENST00000559212 SOGA1O94964 1423 aa19.24■□□□□ 0.67
PCAT29-203ENST00000559212 FGD5Q6ZNL6 1462 aa19.21■□□□□ 0.67
PCAT29-203ENST00000559212 FBLN2P98095 1184 aa19.19■□□□□ 0.66
PCAT29-203ENST00000559212 TDRD9Q8NDG6 1382 aaKnown RBP19.19■□□□□ 0.66
PCAT29-203ENST00000559212 CUX1P39880 1505 aa19.18■□□□□ 0.66
PCAT29-203ENST00000559212 WDR97A6NE52 1622 aa19.18■□□□□ 0.66
PCAT29-203ENST00000559212 SUPT5HO00267 1087 aaKnown RBP19.13■□□□□ 0.65
PCAT29-203ENST00000559212 SNAPC4Q5SXM2 1469 aa19.12■□□□□ 0.65
PCAT29-203ENST00000559212 CYB5RLQ6IPT4 315 aa19.09■□□□□ 0.65
PCAT29-203ENST00000559212 GRIN2BQ13224 1484 aa19.08■□□□□ 0.64
PCAT29-203ENST00000559212 MAGI1Q96QZ7 1491 aaPredicted RBP19.08■□□□□ 0.64
PCAT29-203ENST00000559212 CHMP7Q8WUX9 453 aaPredicted RBP19.06■□□□□ 0.64
PCAT29-203ENST00000559212 ARAP1Q96P48 1450 aa19.04■□□□□ 0.64
PCAT29-203ENST00000559212 SYNJ1O43426 1573 aa19.03■□□□□ 0.64
PCAT29-203ENST00000559212 PBRM1Q86U86 1689 aa19.02■□□□□ 0.64
PCAT29-203ENST00000559212 CLASP1Q7Z460 1538 aa19.01■□□□□ 0.63
PCAT29-203ENST00000559212 SYNJ2O15056 1496 aa19.01■□□□□ 0.63
PCAT29-203ENST00000559212 GAPVD1Q14C86 1478 aa19.01■□□□□ 0.63
PCAT29-203ENST00000559212 ABCA10Q8WWZ4 1543 aa18.98■□□□□ 0.63
PCAT29-203ENST00000559212 ABCA5Q8WWZ7 1642 aa18.96■□□□□ 0.63
PCAT29-203ENST00000559212 WRNQ14191 1432 aaPredicted RBP eCLIP18.91■□□□□ 0.62
PCAT29-203ENST00000559212 BIVM-ERCC5R4GMW8 1640 aa18.9■□□□□ 0.62
PCAT29-203ENST00000559212 TRHP20396 242 aaPredicted RBP18.9■□□□□ 0.62
PCAT29-203ENST00000559212 TOP2BQ02880 1626 aa18.89■□□□□ 0.62
PCAT29-203ENST00000559212 ADAMTS12P58397 1594 aa18.82■□□□□ 0.6
PCAT29-203ENST00000559212 GRIN2AQ12879 1464 aa18.82■□□□□ 0.6
PCAT29-203ENST00000559212 FHAD1B1AJZ9 1412 aa18.76■□□□□ 0.59
PCAT29-203ENST00000559212 CEP170Q5SW79 1584 aa18.76■□□□□ 0.59
PCAT29-203ENST00000559212 ERICH3Q5RHP9 1530 aa18.75■□□□□ 0.59
PCAT29-203ENST00000559212 NUP160Q12769 1436 aa18.74■□□□□ 0.59
PCAT29-203ENST00000559212 ERCC6L2Q5T890 1561 aa18.71■□□□□ 0.59
PCAT29-203ENST00000559212 SHROOM2Q13796 1616 aa18.68■□□□□ 0.58
PCAT29-203ENST00000559212 PRG4Q92954 1404 aaPredicted RBP18.58■□□□□ 0.57
PCAT29-203ENST00000559212 RUSC2Q8N2Y8 1516 aa18.56■□□□□ 0.56
PCAT29-203ENST00000559212 JPH4Q96JJ6 628 aa18.56■□□□□ 0.56
PCAT29-203ENST00000559212 KIF27Q86VH2 1401 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms