RNA–Protein interactions for RNA: ENST00000559177.5

TRPM1-209, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 5

Gene TRPM1, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-209ENST00000559177 NISCHQ9Y2I1 1504 aa24.91■■□□□ 1.58
TRPM1-209ENST00000559177 CCDC180Q9P1Z9 1646 aa22.09■■□□□ 1.13
TRPM1-209ENST00000559177 ABCC9O60706 1549 aa21.71■■□□□ 1.07
TRPM1-209ENST00000559177 DCAF8L2P0C7V8 631 aa20.92■□□□□ 0.94
TRPM1-209ENST00000559177 AEBP2Q6ZN18 517 aaPredicted RBP20.9■□□□□ 0.94
TRPM1-209ENST00000559177 RB1CC1Q8TDY2 1594 aa20.81■□□□□ 0.92
TRPM1-209ENST00000559177 NACADO15069 1562 aa20.78■□□□□ 0.92
TRPM1-209ENST00000559177 ZCCHC6Q5VYS8 1495 aaKnown RBP20.74■□□□□ 0.91
TRPM1-209ENST00000559177 MYO15BQ96JP2 1530 aa20.62■□□□□ 0.89
TRPM1-209ENST00000559177 DCAF1Q9Y4B6 1507 aa20.56■□□□□ 0.88
TRPM1-209ENST00000559177 UNC13AQ9UPW8 1703 aa20.36■□□□□ 0.85
TRPM1-209ENST00000559177 PABPN1Q86U42 306 aaKnown RBP eCLIP20.32■□□□□ 0.84
TRPM1-209ENST00000559177 SCRIBQ14160 1630 aa20.24■□□□□ 0.83
TRPM1-209ENST00000559177 BICRAQ9NZM4 1560 aa20.2■□□□□ 0.82
TRPM1-209ENST00000559177 DNAJC5BQ9UF47 199 aa19.94■□□□□ 0.78
TRPM1-209ENST00000559177 SHROOM4Q9ULL8 1493 aa19.91■□□□□ 0.78
TRPM1-209ENST00000559177 CHIC1Q5VXU3 224 aa19.75■□□□□ 0.75
TRPM1-209ENST00000559177 EIF4G1Q04637 1599 aaKnown RBP19.67■□□□□ 0.74
TRPM1-209ENST00000559177 CC2D2AQ9P2K1 1620 aa19.6■□□□□ 0.73
TRPM1-209ENST00000559177 CECR2Q9BXF3 1484 aa19.47■□□□□ 0.71
TRPM1-209ENST00000559177 SMARCA4P51532 1647 aa19.32■□□□□ 0.68
TRPM1-209ENST00000559177 BAZ1AQ9NRL2 1556 aaPredicted RBP19.29■□□□□ 0.68
TRPM1-209ENST00000559177 ATAD2BQ9ULI0 1458 aa19.23■□□□□ 0.67
TRPM1-209ENST00000559177 MROH2BQ7Z745 1585 aa19.23■□□□□ 0.67
TRPM1-209ENST00000559177 NCAPD3P42695 1498 aa19.19■□□□□ 0.66
TRPM1-209ENST00000559177 SMARCA2P51531 1590 aa19.17■□□□□ 0.66
TRPM1-209ENST00000559177 PEG3Q9GZU2 1588 aa19.1■□□□□ 0.65
TRPM1-209ENST00000559177 HMGXB3Q12766 1538 aa19.08■□□□□ 0.64
TRPM1-209ENST00000559177 BAZ1BQ9UIG0 1483 aaKnown RBP19.07■□□□□ 0.64
TRPM1-209ENST00000559177 WIZO95785 1651 aa19.02■□□□□ 0.64
TRPM1-209ENST00000559177 RSF1Q96T23 1441 aaPredicted RBP19■□□□□ 0.63
TRPM1-209ENST00000559177 NESP48681 1621 aa18.79■□□□□ 0.6
TRPM1-209ENST00000559177 TOP2AP11388 1531 aaKnown RBP18.78■□□□□ 0.6
TRPM1-209ENST00000559177 ERCC6Q03468 1493 aa18.69■□□□□ 0.58
TRPM1-209ENST00000559177 LAMC3Q9Y6N6 1575 aa18.67■□□□□ 0.58
TRPM1-209ENST00000559177 CADPSQ9ULU8 1353 aa18.65■□□□□ 0.58
TRPM1-209ENST00000559177 SUPT5HO00267 1087 aaKnown RBP18.6■□□□□ 0.57
TRPM1-209ENST00000559177 CCDC88BA6NC98 1476 aa18.6■□□□□ 0.57
TRPM1-209ENST00000559177 PDS5BQ9NTI5 1447 aa18.56■□□□□ 0.56
TRPM1-209ENST00000559177 CFTRP13569 1480 aa18.54■□□□□ 0.56
TRPM1-209ENST00000559177 KIF21AQ7Z4S6 1674 aa18.53■□□□□ 0.56
TRPM1-209ENST00000559177 FANCD2Q9BXW9 1451 aa18.45■□□□□ 0.54
TRPM1-209ENST00000559177 THOC2Q8NI27 1593 aaKnown RBP18.45■□□□□ 0.54
TRPM1-209ENST00000559177 CUX2O14529 1486 aa18.43■□□□□ 0.54
TRPM1-209ENST00000559177 CEP164Q9UPV0 1460 aa18.41■□□□□ 0.54
TRPM1-209ENST00000559177 MRC2Q9UBG0 1479 aa18.38■□□□□ 0.53
TRPM1-209ENST00000559177 PRDM2Q13029 1718 aa18.35■□□□□ 0.53
TRPM1-209ENST00000559177 WDR62O43379 1518 aa18.3■□□□□ 0.52
TRPM1-209ENST00000559177 URB2Q14146 1524 aaKnown RBP18.27■□□□□ 0.52
TRPM1-209ENST00000559177 TOPBP1Q92547 1522 aa18.15■□□□□ 0.5
TRPM1-209ENST00000559177 ABCC8Q09428 1581 aa18.11■□□□□ 0.49
TRPM1-209ENST00000559177 DNMBPQ6XZF7 1577 aa18.11■□□□□ 0.49
TRPM1-209ENST00000559177 CUX1P39880 1505 aa18.03■□□□□ 0.48
TRPM1-209ENST00000559177 IFT140Q96RY7 1462 aa18.02■□□□□ 0.48
TRPM1-209ENST00000559177 POLA1P09884 1462 aaPredicted RBP18■□□□□ 0.47
TRPM1-209ENST00000559177 ZNF608Q9ULD9 1512 aaPredicted RBP17.98■□□□□ 0.47
TRPM1-209ENST00000559177 FGD5Q6ZNL6 1462 aa17.97■□□□□ 0.47
TRPM1-209ENST00000559177 RAD54L2Q9Y4B4 1467 aa17.95■□□□□ 0.46
TRPM1-209ENST00000559177 TARBP1Q13395 1621 aaKnown RBP17.95■□□□□ 0.46
TRPM1-209ENST00000559177 SOGA1O94964 1423 aa17.94■□□□□ 0.46
TRPM1-209ENST00000559177 WRNQ14191 1432 aaPredicted RBP eCLIP17.91■□□□□ 0.46
TRPM1-209ENST00000559177 DNAJC5Q9H3Z4 198 aa17.9■□□□□ 0.46
TRPM1-209ENST00000559177 AQRO60306 1485 aaKnown RBP eCLIP17.88■□□□□ 0.45
TRPM1-209ENST00000559177 SYNJ1O43426 1573 aa17.88■□□□□ 0.45
TRPM1-209ENST00000559177 EIF4G3O43432 1585 aaKnown RBP17.87■□□□□ 0.45
TRPM1-209ENST00000559177 TDRD9Q8NDG6 1382 aaKnown RBP17.86■□□□□ 0.45
TRPM1-209ENST00000559177 TOP2BQ02880 1626 aa17.85■□□□□ 0.45
TRPM1-209ENST00000559177 BIVM-ERCC5R4GMW8 1640 aa17.84■□□□□ 0.45
TRPM1-209ENST00000559177 SENP3Q9H4L4 574 aaPredicted RBP17.81■□□□□ 0.44
TRPM1-209ENST00000559177 WDR97A6NE52 1622 aa17.78■□□□□ 0.44
TRPM1-209ENST00000559177 ABCA10Q8WWZ4 1543 aa17.76■□□□□ 0.43
TRPM1-209ENST00000559177 OSCARQ8IYS5 282 aa17.72■□□□□ 0.43
TRPM1-209ENST00000559177 GAPVD1Q14C86 1478 aa17.72■□□□□ 0.43
TRPM1-209ENST00000559177 GRIN2BQ13224 1484 aa17.7■□□□□ 0.42
TRPM1-209ENST00000559177 SNAPC4Q5SXM2 1469 aa17.7■□□□□ 0.42
TRPM1-209ENST00000559177 FBLN2P98095 1184 aa17.7■□□□□ 0.42
TRPM1-209ENST00000559177 ABCA5Q8WWZ7 1642 aa17.69■□□□□ 0.42
TRPM1-209ENST00000559177 PBRM1Q86U86 1689 aa17.67■□□□□ 0.42
TRPM1-209ENST00000559177 CHD1O14646 1710 aa17.65■□□□□ 0.42
TRPM1-209ENST00000559177 MAGI1Q96QZ7 1491 aaPredicted RBP17.63■□□□□ 0.41
TRPM1-209ENST00000559177 CHMP7Q8WUX9 453 aaPredicted RBP17.62■□□□□ 0.41
TRPM1-209ENST00000559177 SYNJ2O15056 1496 aa17.59■□□□□ 0.41
TRPM1-209ENST00000559177 PHF23Q9BUL5 403 aaPredicted RBP17.58■□□□□ 0.41
TRPM1-209ENST00000559177 ERICH3Q5RHP9 1530 aa17.54■□□□□ 0.4
TRPM1-209ENST00000559177 TRIM41Q8WV44 630 aa17.54■□□□□ 0.4
TRPM1-209ENST00000559177 ADAMTS12P58397 1594 aa17.52■□□□□ 0.4
TRPM1-209ENST00000559177 KIF27Q86VH2 1401 aa17.52■□□□□ 0.4
TRPM1-209ENST00000559177 FHAD1B1AJZ9 1412 aa17.5■□□□□ 0.39
TRPM1-209ENST00000559177 GRIN2AQ12879 1464 aa17.48■□□□□ 0.39
TRPM1-209ENST00000559177 IGF1RP08069 1367 aa17.48■□□□□ 0.39
TRPM1-209ENST00000559177 CLASP1Q7Z460 1538 aa17.45■□□□□ 0.38
TRPM1-209ENST00000559177 RUSC2Q8N2Y8 1516 aa17.44■□□□□ 0.38
TRPM1-209ENST00000559177 RIMBP3CA6NJZ7 1639 aa17.43■□□□□ 0.38
TRPM1-209ENST00000559177 RIMBP3BA6NNM3 1639 aa17.43■□□□□ 0.38
TRPM1-209ENST00000559177 RIMBP3Q9UFD9 1639 aa17.43■□□□□ 0.38
TRPM1-209ENST00000559177 ARHGEF11O15085 1522 aa17.42■□□□□ 0.38
TRPM1-209ENST00000559177 CEP170Q5SW79 1584 aa17.4■□□□□ 0.38
TRPM1-209ENST00000559177 NUP160Q12769 1436 aa17.39■□□□□ 0.37
TRPM1-209ENST00000559177 CUL7Q14999 1698 aa17.38■□□□□ 0.37
TRPM1-209ENST00000559177 CARMIL1Q5VZK9 1371 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms