RNA–Protein interactions for RNA: ENST00000559140.2

LARP6-203, Transcript of La ribonucleoprotein domain family member 6, humanhuman

TSL 2

Gene LARP6, Length 964 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP6-203ENST00000559140 NISCHQ9Y2I1 1504 aa48.31■■■■■ 5.32
LARP6-203ENST00000559140 ABCC9O60706 1549 aa44.19■■■■■ 4.67
LARP6-203ENST00000559140 CCDC180Q9P1Z9 1646 aa43.55■■■■■ 4.56
LARP6-203ENST00000559140 DNAJC5BQ9UF47 199 aa41.87■■■■■ 4.29
LARP6-203ENST00000559140 RB1CC1Q8TDY2 1594 aa41.78■■■■■ 4.28
LARP6-203ENST00000559140 NACADO15069 1562 aa41.33■■■■■ 4.21
LARP6-203ENST00000559140 DCAF8L2P0C7V8 631 aa41.2■■■■■ 4.19
LARP6-203ENST00000559140 PABPN1Q86U42 306 aaKnown RBP eCLIP41.08■■■■■ 4.17
LARP6-203ENST00000559140 UNC13AQ9UPW8 1703 aa40.74■■■■■ 4.11
LARP6-203ENST00000559140 MYO15BQ96JP2 1530 aa40.53■■■■■ 4.08
LARP6-203ENST00000559140 BICRAQ9NZM4 1560 aa40.52■■■■■ 4.08
LARP6-203ENST00000559140 SHROOM4Q9ULL8 1493 aa39.94■■■■□ 3.98
LARP6-203ENST00000559140 ZCCHC6Q5VYS8 1495 aaKnown RBP39.92■■■■□ 3.98
LARP6-203ENST00000559140 CECR2Q9BXF3 1484 aa39.85■■■■□ 3.97
LARP6-203ENST00000559140 CC2D2AQ9P2K1 1620 aa39.83■■■■□ 3.97
LARP6-203ENST00000559140 DCAF1Q9Y4B6 1507 aa39.82■■■■□ 3.97
LARP6-203ENST00000559140 SCRIBQ14160 1630 aa39.75■■■■□ 3.95
LARP6-203ENST00000559140 EIF4G1Q04637 1599 aaKnown RBP39.62■■■■□ 3.93
LARP6-203ENST00000559140 DNAJC5Q9H3Z4 198 aa38.86■■■■□ 3.81
LARP6-203ENST00000559140 CUX2O14529 1486 aa38.27■■■■□ 3.72
LARP6-203ENST00000559140 ERCC6Q03468 1493 aa38.24■■■■□ 3.71
LARP6-203ENST00000559140 NCAPD3P42695 1498 aa38.15■■■■□ 3.7
LARP6-203ENST00000559140 ATAD2BQ9ULI0 1458 aa37.98■■■■□ 3.67
LARP6-203ENST00000559140 SMARCA2P51531 1590 aa37.86■■■■□ 3.65
LARP6-203ENST00000559140 HMGXB3Q12766 1538 aa37.83■■■■□ 3.65
LARP6-203ENST00000559140 SMARCA4P51532 1647 aa37.8■■■■□ 3.64
LARP6-203ENST00000559140 NESP48681 1621 aa37.78■■■■□ 3.64
LARP6-203ENST00000559140 BAZ1BQ9UIG0 1483 aaKnown RBP37.64■■■■□ 3.62
LARP6-203ENST00000559140 BAZ1AQ9NRL2 1556 aaPredicted RBP37.56■■■■□ 3.6
LARP6-203ENST00000559140 THOC2Q8NI27 1593 aaKnown RBP37.46■■■■□ 3.59
LARP6-203ENST00000559140 LAMC3Q9Y6N6 1575 aa37.4■■■■□ 3.58
LARP6-203ENST00000559140 PEG3Q9GZU2 1588 aa37.38■■■■□ 3.58
LARP6-203ENST00000559140 PDS5BQ9NTI5 1447 aa37.26■■■■□ 3.55
LARP6-203ENST00000559140 KIF21AQ7Z4S6 1674 aa37.24■■■■□ 3.55
LARP6-203ENST00000559140 MROH2BQ7Z745 1585 aa37.23■■■■□ 3.55
LARP6-203ENST00000559140 TRIM41Q8WV44 630 aa37.06■■■■□ 3.52
LARP6-203ENST00000559140 CADPSQ9ULU8 1353 aa37.01■■■■□ 3.51
LARP6-203ENST00000559140 MRC2Q9UBG0 1479 aa36.95■■■■□ 3.51
LARP6-203ENST00000559140 WDR62O43379 1518 aa36.84■■■■□ 3.49
LARP6-203ENST00000559140 WIZO95785 1651 aa36.76■■■■□ 3.47
LARP6-203ENST00000559140 CEP164Q9UPV0 1460 aa36.71■■■■□ 3.47
LARP6-203ENST00000559140 FANCD2Q9BXW9 1451 aa36.62■■■■□ 3.45
LARP6-203ENST00000559140 OSCARQ8IYS5 282 aa36.48■■■■□ 3.43
LARP6-203ENST00000559140 CFTRP13569 1480 aa36.44■■■■□ 3.42
LARP6-203ENST00000559140 URB2Q14146 1524 aaKnown RBP36.32■■■■□ 3.4
LARP6-203ENST00000559140 RSF1Q96T23 1441 aaPredicted RBP36.26■■■■□ 3.4
LARP6-203ENST00000559140 TOP2AP11388 1531 aaKnown RBP36.26■■■■□ 3.4
LARP6-203ENST00000559140 RIMBP3CA6NJZ7 1639 aa36.02■■■■□ 3.36
LARP6-203ENST00000559140 RIMBP3BA6NNM3 1639 aa36.02■■■■□ 3.36
LARP6-203ENST00000559140 RIMBP3Q9UFD9 1639 aa36.02■■■■□ 3.36
LARP6-203ENST00000559140 PRDM2Q13029 1718 aa35.99■■■■□ 3.35
LARP6-203ENST00000559140 IFT140Q96RY7 1462 aa35.99■■■■□ 3.35
LARP6-203ENST00000559140 ZNF608Q9ULD9 1512 aaPredicted RBP35.98■■■■□ 3.35
LARP6-203ENST00000559140 CCDC88BA6NC98 1476 aa35.86■■■■□ 3.33
LARP6-203ENST00000559140 ARHGEF11O15085 1522 aa35.86■■■■□ 3.33
LARP6-203ENST00000559140 TOPBP1Q92547 1522 aa35.84■■■■□ 3.33
LARP6-203ENST00000559140 EIF4G3O43432 1585 aaKnown RBP35.74■■■■□ 3.31
LARP6-203ENST00000559140 ABCC8Q09428 1581 aa35.72■■■■□ 3.31
LARP6-203ENST00000559140 CYB5RLQ6IPT4 315 aa35.69■■■■□ 3.3
LARP6-203ENST00000559140 DNMBPQ6XZF7 1577 aa35.66■■■■□ 3.3
LARP6-203ENST00000559140 AQRO60306 1485 aaKnown RBP eCLIP35.6■■■■□ 3.29
LARP6-203ENST00000559140 FBLN2P98095 1184 aa35.58■■■■□ 3.29
LARP6-203ENST00000559140 CHD1O14646 1710 aa35.56■■■■□ 3.28
LARP6-203ENST00000559140 TRHP20396 242 aaPredicted RBP35.54■■■■□ 3.28
LARP6-203ENST00000559140 TARBP1Q13395 1621 aaKnown RBP35.51■■■■□ 3.28
LARP6-203ENST00000559140 ARAP1Q96P48 1450 aa35.47■■■■□ 3.27
LARP6-203ENST00000559140 POLA1P09884 1462 aaPredicted RBP35.44■■■■□ 3.26
LARP6-203ENST00000559140 RAD54L2Q9Y4B4 1467 aa35.35■■■■□ 3.25
LARP6-203ENST00000559140 TDRD9Q8NDG6 1382 aaKnown RBP35.31■■■■□ 3.24
LARP6-203ENST00000559140 SOGA1O94964 1423 aa35.3■■■■□ 3.24
LARP6-203ENST00000559140 SNAPC4Q5SXM2 1469 aa35.23■■■■□ 3.23
LARP6-203ENST00000559140 CHMP7Q8WUX9 453 aaPredicted RBP35.19■■■■□ 3.22
LARP6-203ENST00000559140 FGD5Q6ZNL6 1462 aa35.16■■■■□ 3.22
LARP6-203ENST00000559140 CLASP1Q7Z460 1538 aa35.13■■■■□ 3.21
LARP6-203ENST00000559140 WDR97A6NE52 1622 aa35.12■■■■□ 3.21
LARP6-203ENST00000559140 SYNJ1O43426 1573 aa35.12■■■■□ 3.21
LARP6-203ENST00000559140 MAGI1Q96QZ7 1491 aaPredicted RBP35.09■■■■□ 3.21
LARP6-203ENST00000559140 GRIN2BQ13224 1484 aa35.04■■■■□ 3.2
LARP6-203ENST00000559140 CUX1P39880 1505 aa35.01■■■■□ 3.19
LARP6-203ENST00000559140 SYNJ2O15056 1496 aa34.98■■■■□ 3.19
LARP6-203ENST00000559140 AEBP2Q6ZN18 517 aaPredicted RBP34.92■■■■□ 3.18
LARP6-203ENST00000559140 GAPVD1Q14C86 1478 aa34.85■■■■□ 3.17
LARP6-203ENST00000559140 PBRM1Q86U86 1689 aa34.83■■■■□ 3.17
LARP6-203ENST00000559140 ABCA10Q8WWZ4 1543 aa34.7■■■■□ 3.14
LARP6-203ENST00000559140 ABCA5Q8WWZ7 1642 aa34.67■■■■□ 3.14
LARP6-203ENST00000559140 GRIN2AQ12879 1464 aa34.58■■■■□ 3.13
LARP6-203ENST00000559140 ERCC6L2Q5T890 1561 aa34.57■■■■□ 3.12
LARP6-203ENST00000559140 WRNQ14191 1432 aaPredicted RBP eCLIP34.5■■■■□ 3.11
LARP6-203ENST00000559140 ADAMTS12P58397 1594 aa34.49■■■■□ 3.11
LARP6-203ENST00000559140 CEP170Q5SW79 1584 aa34.48■■■■□ 3.11
LARP6-203ENST00000559140 NUP160Q12769 1436 aa34.46■■■■□ 3.11
LARP6-203ENST00000559140 SUPT5HO00267 1087 aaKnown RBP34.4■■■■□ 3.1
LARP6-203ENST00000559140 FHAD1B1AJZ9 1412 aa34.38■■■■□ 3.09
LARP6-203ENST00000559140 SHROOM2Q13796 1616 aa34.33■■■■□ 3.09
LARP6-203ENST00000559140 TOP2BQ02880 1626 aa34.3■■■■□ 3.08
LARP6-203ENST00000559140 BIVM-ERCC5R4GMW8 1640 aa34.28■■■■□ 3.08
LARP6-203ENST00000559140 ERICH3Q5RHP9 1530 aa34.25■■■■□ 3.07
LARP6-203ENST00000559140 PRG4Q92954 1404 aaPredicted RBP34.23■■■■□ 3.07
LARP6-203ENST00000559140 KIF13AQ9H1H9 1805 aa34.16■■■■□ 3.06
LARP6-203ENST00000559140 JPH4Q96JJ6 628 aa34.16■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms