RNA–Protein interactions for RNA: ENST00000559139.5

PAK6-210, Transcript of p21 (RAC1) activated kinase 6, humanhuman

TSL 2

Gene PAK6, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAK6-210ENST00000559139 NISCHQ9Y2I1 1504 aa60.35■■■■■ 7.25
PAK6-210ENST00000559139 CCDC180Q9P1Z9 1646 aa54.13■■■■■ 6.26
PAK6-210ENST00000559139 ABCC9O60706 1549 aa54■■■■■ 6.24
PAK6-210ENST00000559139 RB1CC1Q8TDY2 1594 aa51.49■■■■■ 5.83
PAK6-210ENST00000559139 NACADO15069 1562 aa51.15■■■■■ 5.78
PAK6-210ENST00000559139 DCAF8L2P0C7V8 631 aa50.94■■■■■ 5.75
PAK6-210ENST00000559139 DNAJC5BQ9UF47 199 aa50.54■■■■■ 5.68
PAK6-210ENST00000559139 MYO15BQ96JP2 1530 aa50.46■■■■■ 5.67
PAK6-210ENST00000559139 UNC13AQ9UPW8 1703 aa50.32■■■■■ 5.65
PAK6-210ENST00000559139 PABPN1Q86U42 306 aaKnown RBP eCLIP50.29■■■■■ 5.64
PAK6-210ENST00000559139 ZCCHC6Q5VYS8 1495 aaKnown RBP50.01■■■■■ 5.6
PAK6-210ENST00000559139 BICRAQ9NZM4 1560 aa49.93■■■■■ 5.58
PAK6-210ENST00000559139 DCAF1Q9Y4B6 1507 aa49.86■■■■■ 5.57
PAK6-210ENST00000559139 SHROOM4Q9ULL8 1493 aa49.31■■■■■ 5.48
PAK6-210ENST00000559139 SCRIBQ14160 1630 aa49.31■■■■■ 5.48
PAK6-210ENST00000559139 CC2D2AQ9P2K1 1620 aa48.8■■■■■ 5.4
PAK6-210ENST00000559139 EIF4G1Q04637 1599 aaKnown RBP48.72■■■■■ 5.39
PAK6-210ENST00000559139 CECR2Q9BXF3 1484 aa48.64■■■■■ 5.38
PAK6-210ENST00000559139 NCAPD3P42695 1498 aa47.21■■■■■ 5.15
PAK6-210ENST00000559139 ATAD2BQ9ULI0 1458 aa47.07■■■■■ 5.13
PAK6-210ENST00000559139 SMARCA4P51532 1647 aa47.05■■■■■ 5.12
PAK6-210ENST00000559139 SMARCA2P51531 1590 aa46.97■■■■■ 5.11
PAK6-210ENST00000559139 HMGXB3Q12766 1538 aa46.86■■■■■ 5.09
PAK6-210ENST00000559139 BAZ1AQ9NRL2 1556 aaPredicted RBP46.86■■■■■ 5.09
PAK6-210ENST00000559139 ERCC6Q03468 1493 aa46.64■■■■■ 5.06
PAK6-210ENST00000559139 BAZ1BQ9UIG0 1483 aaKnown RBP46.63■■■■■ 5.06
PAK6-210ENST00000559139 PEG3Q9GZU2 1588 aa46.6■■■■■ 5.05
PAK6-210ENST00000559139 CUX2O14529 1486 aa46.51■■■■■ 5.04
PAK6-210ENST00000559139 MROH2BQ7Z745 1585 aa46.49■■■■■ 5.03
PAK6-210ENST00000559139 NESP48681 1621 aa46.41■■■■■ 5.02
PAK6-210ENST00000559139 DNAJC5Q9H3Z4 198 aa46.37■■■■■ 5.01
PAK6-210ENST00000559139 LAMC3Q9Y6N6 1575 aa46.14■■■■■ 4.98
PAK6-210ENST00000559139 WIZO95785 1651 aa45.96■■■■■ 4.95
PAK6-210ENST00000559139 THOC2Q8NI27 1593 aaKnown RBP45.92■■■■■ 4.94
PAK6-210ENST00000559139 PDS5BQ9NTI5 1447 aa45.87■■■■■ 4.93
PAK6-210ENST00000559139 KIF21AQ7Z4S6 1674 aa45.85■■■■■ 4.93
PAK6-210ENST00000559139 CADPSQ9ULU8 1353 aa45.78■■■■■ 4.92
PAK6-210ENST00000559139 RSF1Q96T23 1441 aaPredicted RBP45.57■■■■■ 4.89
PAK6-210ENST00000559139 MRC2Q9UBG0 1479 aa45.45■■■■■ 4.87
PAK6-210ENST00000559139 TOP2AP11388 1531 aaKnown RBP45.37■■■■■ 4.85
PAK6-210ENST00000559139 WDR62O43379 1518 aa45.33■■■■■ 4.85
PAK6-210ENST00000559139 CEP164Q9UPV0 1460 aa45.3■■■■■ 4.84
PAK6-210ENST00000559139 CFTRP13569 1480 aa45.27■■■■■ 4.84
PAK6-210ENST00000559139 FANCD2Q9BXW9 1451 aa45.25■■■■■ 4.83
PAK6-210ENST00000559139 PRDM2Q13029 1718 aa44.88■■■■■ 4.78
PAK6-210ENST00000559139 CCDC88BA6NC98 1476 aa44.86■■■■■ 4.77
PAK6-210ENST00000559139 URB2Q14146 1524 aaKnown RBP44.85■■■■■ 4.77
PAK6-210ENST00000559139 OSCARQ8IYS5 282 aa44.44■■■■■ 4.7
PAK6-210ENST00000559139 TOPBP1Q92547 1522 aa44.41■■■■■ 4.7
PAK6-210ENST00000559139 IFT140Q96RY7 1462 aa44.4■■■■■ 4.7
PAK6-210ENST00000559139 TRIM41Q8WV44 630 aa44.39■■■■■ 4.7
PAK6-210ENST00000559139 ABCC8Q09428 1581 aa44.37■■■■■ 4.69
PAK6-210ENST00000559139 ZNF608Q9ULD9 1512 aaPredicted RBP44.29■■■■■ 4.68
PAK6-210ENST00000559139 DNMBPQ6XZF7 1577 aa44.26■■■■■ 4.68
PAK6-210ENST00000559139 EIF4G3O43432 1585 aaKnown RBP44.06■■■■■ 4.64
PAK6-210ENST00000559139 TARBP1Q13395 1621 aaKnown RBP44■■■■■ 4.63
PAK6-210ENST00000559139 POLA1P09884 1462 aaPredicted RBP43.96■■■■■ 4.63
PAK6-210ENST00000559139 AQRO60306 1485 aaKnown RBP eCLIP43.91■■■■■ 4.62
PAK6-210ENST00000559139 RIMBP3CA6NJZ7 1639 aa43.82■■■■■ 4.61
PAK6-210ENST00000559139 RIMBP3BA6NNM3 1639 aa43.82■■■■■ 4.61
PAK6-210ENST00000559139 RIMBP3Q9UFD9 1639 aa43.82■■■■■ 4.61
PAK6-210ENST00000559139 RAD54L2Q9Y4B4 1467 aa43.79■■■■■ 4.6
PAK6-210ENST00000559139 SOGA1O94964 1423 aa43.79■■■■■ 4.6
PAK6-210ENST00000559139 CHD1O14646 1710 aa43.74■■■■■ 4.59
PAK6-210ENST00000559139 FGD5Q6ZNL6 1462 aa43.7■■■■■ 4.59
PAK6-210ENST00000559139 ARHGEF11O15085 1522 aa43.68■■■■■ 4.58
PAK6-210ENST00000559139 SUPT5HO00267 1087 aaKnown RBP43.67■■■■■ 4.58
PAK6-210ENST00000559139 CUX1P39880 1505 aa43.67■■■■■ 4.58
PAK6-210ENST00000559139 TDRD9Q8NDG6 1382 aaKnown RBP43.67■■■■■ 4.58
PAK6-210ENST00000559139 FBLN2P98095 1184 aa43.65■■■■■ 4.58
PAK6-210ENST00000559139 WDR97A6NE52 1622 aa43.59■■■■■ 4.57
PAK6-210ENST00000559139 SNAPC4Q5SXM2 1469 aa43.47■■■■■ 4.55
PAK6-210ENST00000559139 GRIN2BQ13224 1484 aa43.38■■■■■ 4.54
PAK6-210ENST00000559139 CYB5RLQ6IPT4 315 aa43.38■■■■■ 4.53
PAK6-210ENST00000559139 MAGI1Q96QZ7 1491 aaPredicted RBP43.38■■■■■ 4.53
PAK6-210ENST00000559139 CHMP7Q8WUX9 453 aaPredicted RBP43.35■■■■■ 4.53
PAK6-210ENST00000559139 GAPVD1Q14C86 1478 aa43.25■■■■■ 4.51
PAK6-210ENST00000559139 ARAP1Q96P48 1450 aa43.25■■■■■ 4.51
PAK6-210ENST00000559139 PBRM1Q86U86 1689 aa43.24■■■■■ 4.51
PAK6-210ENST00000559139 SYNJ1O43426 1573 aa43.24■■■■■ 4.51
PAK6-210ENST00000559139 SYNJ2O15056 1496 aa43.23■■■■■ 4.51
PAK6-210ENST00000559139 ABCA10Q8WWZ4 1543 aa43.22■■■■■ 4.51
PAK6-210ENST00000559139 CLASP1Q7Z460 1538 aa43.21■■■■■ 4.51
PAK6-210ENST00000559139 ABCA5Q8WWZ7 1642 aa43.14■■■■■ 4.5
PAK6-210ENST00000559139 WRNQ14191 1432 aaPredicted RBP eCLIP43.07■■■■■ 4.49
PAK6-210ENST00000559139 BIVM-ERCC5R4GMW8 1640 aa43.04■■■■■ 4.48
PAK6-210ENST00000559139 TOP2BQ02880 1626 aa43.02■■■■■ 4.48
PAK6-210ENST00000559139 TRHP20396 242 aaPredicted RBP42.89■■■■■ 4.46
PAK6-210ENST00000559139 GRIN2AQ12879 1464 aa42.81■■■■■ 4.44
PAK6-210ENST00000559139 ADAMTS12P58397 1594 aa42.8■■■■■ 4.44
PAK6-210ENST00000559139 FHAD1B1AJZ9 1412 aa42.71■■■■■ 4.43
PAK6-210ENST00000559139 ERICH3Q5RHP9 1530 aa42.69■■■■■ 4.42
PAK6-210ENST00000559139 CEP170Q5SW79 1584 aa42.65■■■■■ 4.42
PAK6-210ENST00000559139 NUP160Q12769 1436 aa42.65■■■■■ 4.42
PAK6-210ENST00000559139 ERCC6L2Q5T890 1561 aa42.53■■■■■ 4.4
PAK6-210ENST00000559139 SHROOM2Q13796 1616 aa42.47■■■■■ 4.39
PAK6-210ENST00000559139 JPH4Q96JJ6 628 aa42.26■■■■■ 4.36
PAK6-210ENST00000559139 PRG4Q92954 1404 aaPredicted RBP42.26■■■■■ 4.36
PAK6-210ENST00000559139 KIF27Q86VH2 1401 aa42.2■■■■■ 4.35
PAK6-210ENST00000559139 RUSC2Q8N2Y8 1516 aa42.19■■■■■ 4.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms