RNA–Protein interactions for RNA: ENST00000559075.5

ETFA-206, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 2

Gene ETFA, Length 1,735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-206ENST00000559075 NISCHQ9Y2I1 1504 aa49.63■■■■■ 5.54
ETFA-206ENST00000559075 CCDC180Q9P1Z9 1646 aa43.47■■■■■ 4.55
ETFA-206ENST00000559075 ZCCHC6Q5VYS8 1495 aaKnown RBP41.58■■■■■ 4.25
ETFA-206ENST00000559075 ABCC9O60706 1549 aa41.44■■■■■ 4.22
ETFA-206ENST00000559075 DCAF8L2P0C7V8 631 aa41.16■■■■■ 4.18
ETFA-206ENST00000559075 DCAF1Q9Y4B6 1507 aa41.05■■■■■ 4.16
ETFA-206ENST00000559075 MYO15BQ96JP2 1530 aa40.72■■■■■ 4.11
ETFA-206ENST00000559075 NACADO15069 1562 aa40.6■■■■■ 4.09
ETFA-206ENST00000559075 RB1CC1Q8TDY2 1594 aa40.34■■■■■ 4.05
ETFA-206ENST00000559075 SHROOM4Q9ULL8 1493 aa40.17■■■■■ 4.02
ETFA-206ENST00000559075 SCRIBQ14160 1630 aa39.88■■■■□ 3.97
ETFA-206ENST00000559075 UNC13AQ9UPW8 1703 aa39.5■■■■□ 3.91
ETFA-206ENST00000559075 BICRAQ9NZM4 1560 aa39.1■■■■□ 3.85
ETFA-206ENST00000559075 PABPN1Q86U42 306 aaKnown RBP eCLIP39.03■■■■□ 3.84
ETFA-206ENST00000559075 CECR2Q9BXF3 1484 aa38.58■■■■□ 3.77
ETFA-206ENST00000559075 SUPT5HO00267 1087 aaKnown RBP38.5■■■■□ 3.75
ETFA-206ENST00000559075 BAZ1AQ9NRL2 1556 aaPredicted RBP38.35■■■■□ 3.73
ETFA-206ENST00000559075 RSF1Q96T23 1441 aaPredicted RBP38.34■■■■□ 3.73
ETFA-206ENST00000559075 MROH2BQ7Z745 1585 aa38.31■■■■□ 3.72
ETFA-206ENST00000559075 SMARCA4P51532 1647 aa38.22■■■■□ 3.71
ETFA-206ENST00000559075 WIZO95785 1651 aa37.99■■■■□ 3.67
ETFA-206ENST00000559075 EIF4G1Q04637 1599 aaKnown RBP37.96■■■■□ 3.67
ETFA-206ENST00000559075 PEG3Q9GZU2 1588 aa37.78■■■■□ 3.64
ETFA-206ENST00000559075 ATAD2BQ9ULI0 1458 aa37.7■■■■□ 3.63
ETFA-206ENST00000559075 SMARCA2P51531 1590 aa37.68■■■■□ 3.62
ETFA-206ENST00000559075 TOP2AP11388 1531 aaKnown RBP37.58■■■■□ 3.61
ETFA-206ENST00000559075 CC2D2AQ9P2K1 1620 aa37.51■■■■□ 3.6
ETFA-206ENST00000559075 NCAPD3P42695 1498 aa37.47■■■■□ 3.59
ETFA-206ENST00000559075 BAZ1BQ9UIG0 1483 aaKnown RBP37.47■■■■□ 3.59
ETFA-206ENST00000559075 HMGXB3Q12766 1538 aa37.36■■■■□ 3.57
ETFA-206ENST00000559075 CCDC88BA6NC98 1476 aa37.2■■■■□ 3.55
ETFA-206ENST00000559075 DNAJC5BQ9UF47 199 aa36.93■■■■□ 3.5
ETFA-206ENST00000559075 CHIC1Q5VXU3 224 aa36.65■■■■□ 3.46
ETFA-206ENST00000559075 CFTRP13569 1480 aa36.51■■■■□ 3.44
ETFA-206ENST00000559075 CADPSQ9ULU8 1353 aa36.48■■■■□ 3.43
ETFA-206ENST00000559075 PRDM2Q13029 1718 aa36.32■■■■□ 3.4
ETFA-206ENST00000559075 ABCC8Q09428 1581 aa36.26■■■■□ 3.4
ETFA-206ENST00000559075 LAMC3Q9Y6N6 1575 aa36.26■■■■□ 3.4
ETFA-206ENST00000559075 TRIM41Q8WV44 630 aa36.25■■■■□ 3.39
ETFA-206ENST00000559075 NESP48681 1621 aa36.25■■■■□ 3.39
ETFA-206ENST00000559075 WRNQ14191 1432 aaPredicted RBP eCLIP36.1■■■■□ 3.37
ETFA-206ENST00000559075 FANCD2Q9BXW9 1451 aa36.05■■■■□ 3.36
ETFA-206ENST00000559075 PDS5BQ9NTI5 1447 aa36■■■■□ 3.35
ETFA-206ENST00000559075 SYNJ1O43426 1573 aa35.94■■■■□ 3.34
ETFA-206ENST00000559075 CEP164Q9UPV0 1460 aa35.87■■■■□ 3.33
ETFA-206ENST00000559075 TOP2BQ02880 1626 aa35.86■■■■□ 3.33
ETFA-206ENST00000559075 CUX1P39880 1505 aa35.84■■■■□ 3.33
ETFA-206ENST00000559075 BIVM-ERCC5R4GMW8 1640 aa35.83■■■■□ 3.33
ETFA-206ENST00000559075 KIF21AQ7Z4S6 1674 aa35.83■■■■□ 3.33
ETFA-206ENST00000559075 DNMBPQ6XZF7 1577 aa35.66■■■■□ 3.3
ETFA-206ENST00000559075 TOPBP1Q92547 1522 aa35.62■■■■□ 3.29
ETFA-206ENST00000559075 URB2Q14146 1524 aaKnown RBP35.61■■■■□ 3.29
ETFA-206ENST00000559075 ERCC6Q03468 1493 aa35.59■■■■□ 3.29
ETFA-206ENST00000559075 FAM9AQ8IZU1 332 aaPredicted RBP35.54■■■■□ 3.28
ETFA-206ENST00000559075 MRC2Q9UBG0 1479 aa35.53■■■■□ 3.28
ETFA-206ENST00000559075 FGD5Q6ZNL6 1462 aa35.52■■■■□ 3.28
ETFA-206ENST00000559075 SOGA1O94964 1423 aa35.51■■■■□ 3.27
ETFA-206ENST00000559075 POLA1P09884 1462 aaPredicted RBP35.41■■■■□ 3.26
ETFA-206ENST00000559075 RUSC2Q8N2Y8 1516 aa35.4■■■■□ 3.26
ETFA-206ENST00000559075 EEA1Q15075 1411 aa35.4■■■■□ 3.26
ETFA-206ENST00000559075 WDR62O43379 1518 aa35.35■■■■□ 3.25
ETFA-206ENST00000559075 THOC2Q8NI27 1593 aaKnown RBP35.32■■■■□ 3.24
ETFA-206ENST00000559075 RAD54L2Q9Y4B4 1467 aa35.29■■■■□ 3.24
ETFA-206ENST00000559075 CSRNP3Q8WYN3 585 aa35.27■■■■□ 3.24
ETFA-206ENST00000559075 KIF27Q86VH2 1401 aa35.24■■■■□ 3.23
ETFA-206ENST00000559075 LOC105371045A0A1W2PR82 267 aa35.23■■■■□ 3.23
ETFA-206ENST00000559075 CUX2O14529 1486 aa35.22■■■■□ 3.23
ETFA-206ENST00000559075 ABCA10Q8WWZ4 1543 aa35.21■■■■□ 3.23
ETFA-206ENST00000559075 WDR97A6NE52 1622 aa35.11■■■■□ 3.21
ETFA-206ENST00000559075 TARBP1Q13395 1621 aaKnown RBP35.11■■■■□ 3.21
ETFA-206ENST00000559075 IFT140Q96RY7 1462 aa35.05■■■■□ 3.2
ETFA-206ENST00000559075 EHMT2Q96KQ7 1210 aa35.04■■■■□ 3.2
ETFA-206ENST00000559075 TDRD9Q8NDG6 1382 aaKnown RBP35■■■■□ 3.19
ETFA-206ENST00000559075 IGF1RP08069 1367 aa34.97■■■■□ 3.19
ETFA-206ENST00000559075 ABCA5Q8WWZ7 1642 aa34.94■■■■□ 3.18
ETFA-206ENST00000559075 KIF21BO75037 1637 aa34.93■■■■□ 3.18
ETFA-206ENST00000559075 GAPVD1Q14C86 1478 aa34.92■■■■□ 3.18
ETFA-206ENST00000559075 PRXQ9BXM0 1461 aa34.88■■■■□ 3.17
ETFA-206ENST00000559075 GOLGA3Q08378 1498 aa34.87■■■■□ 3.17
ETFA-206ENST00000559075 ZNF608Q9ULD9 1512 aaPredicted RBP34.84■■■■□ 3.17
ETFA-206ENST00000559075 AQRO60306 1485 aaKnown RBP eCLIP34.84■■■■□ 3.174e-6■□□□□ 10.1
ETFA-206ENST00000559075 RAPGEF2Q9Y4G8 1499 aa34.8■■■■□ 3.16
ETFA-206ENST00000559075 ERICH3Q5RHP9 1530 aa34.8■■■■□ 3.16
ETFA-206ENST00000559075 CARMIL1Q5VZK9 1371 aa34.8■■■■□ 3.16
ETFA-206ENST00000559075 UBTFP17480 764 aaKnown RBP34.78■■■■□ 3.16
ETFA-206ENST00000559075 PBRM1Q86U86 1689 aa34.74■■■■□ 3.15
ETFA-206ENST00000559075 CUL7Q14999 1698 aa34.74■■■■□ 3.15
ETFA-206ENST00000559075 EIF4G3O43432 1585 aaKnown RBP34.71■■■■□ 3.15
ETFA-206ENST00000559075 TNIKQ9UKE5 1360 aa34.71■■■■□ 3.15
ETFA-206ENST00000559075 GRIN2BQ13224 1484 aa34.71■■■■□ 3.15
ETFA-206ENST00000559075 FHAD1B1AJZ9 1412 aa34.54■■■■□ 3.12
ETFA-206ENST00000559075 SNAPC4Q5SXM2 1469 aa34.5■■■■□ 3.11
ETFA-206ENST00000559075 ADAMTS12P58397 1594 aa34.5■■■■□ 3.11
ETFA-206ENST00000559075 MAGI1Q96QZ7 1491 aaPredicted RBP34.46■■■■□ 3.11
ETFA-206ENST00000559075 CEP162Q5TB80 1403 aa34.45■■■■□ 3.11
ETFA-206ENST00000559075 SYNJ2O15056 1496 aa34.32■■■■□ 3.08
ETFA-206ENST00000559075 RANGAP1P46060 587 aaPredicted RBP34.31■■■■□ 3.08
ETFA-206ENST00000559075 CHMP7Q8WUX9 453 aaPredicted RBP34.31■■■■□ 3.08
ETFA-206ENST00000559075 CTTNBP2Q8WZ74 1663 aa34.29■■■■□ 3.08
ETFA-206ENST00000559075 CLIP1P30622 1438 aa34.29■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms