RNA–Protein interactions for RNA: ENST00000559067.1

NTRK3-213, Transcript of neurotrophic receptor tyrosine kinase 3, humanhuman

TSL 4

Gene NTRK3, Length 554 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK3-213ENST00000559067 NISCHQ9Y2I1 1504 aa40■■■■□ 3.99
NTRK3-213ENST00000559067 CCDC180Q9P1Z9 1646 aa35.61■■■■□ 3.29
NTRK3-213ENST00000559067 ABCC9O60706 1549 aa34.71■■■■□ 3.15
NTRK3-213ENST00000559067 RB1CC1Q8TDY2 1594 aa33.48■■■□□ 2.95
NTRK3-213ENST00000559067 DCAF8L2P0C7V8 631 aa33.47■■■□□ 2.95
NTRK3-213ENST00000559067 NACADO15069 1562 aa33.43■■■□□ 2.94
NTRK3-213ENST00000559067 ZCCHC6Q5VYS8 1495 aaKnown RBP33.33■■■□□ 2.93
NTRK3-213ENST00000559067 MYO15BQ96JP2 1530 aa33.21■■■□□ 2.91
NTRK3-213ENST00000559067 DCAF1Q9Y4B6 1507 aa33.1■■■□□ 2.89
NTRK3-213ENST00000559067 UNC13AQ9UPW8 1703 aa32.69■■■□□ 2.82
NTRK3-213ENST00000559067 SCRIBQ14160 1630 aa32.48■■■□□ 2.79
NTRK3-213ENST00000559067 PABPN1Q86U42 306 aaKnown RBP eCLIP32.42■■■□□ 2.78
NTRK3-213ENST00000559067 BICRAQ9NZM4 1560 aa32.36■■■□□ 2.77
NTRK3-213ENST00000559067 SHROOM4Q9ULL8 1493 aa32.11■■■□□ 2.73
NTRK3-213ENST00000559067 DNAJC5BQ9UF47 199 aa31.65■■■□□ 2.66
NTRK3-213ENST00000559067 EIF4G1Q04637 1599 aaKnown RBP31.55■■■□□ 2.64
NTRK3-213ENST00000559067 CC2D2AQ9P2K1 1620 aa31.41■■■□□ 2.62
NTRK3-213ENST00000559067 CECR2Q9BXF3 1484 aa31.19■■■□□ 2.58
NTRK3-213ENST00000559067 SMARCA4P51532 1647 aa31.06■■■□□ 2.56
NTRK3-213ENST00000559067 BAZ1AQ9NRL2 1556 aaPredicted RBP31.05■■■□□ 2.56
NTRK3-213ENST00000559067 SMARCA2P51531 1590 aa30.88■■■□□ 2.53
NTRK3-213ENST00000559067 ATAD2BQ9ULI0 1458 aa30.82■■■□□ 2.53
NTRK3-213ENST00000559067 MROH2BQ7Z745 1585 aa30.81■■■□□ 2.52
NTRK3-213ENST00000559067 NCAPD3P42695 1498 aa30.78■■■□□ 2.52
NTRK3-213ENST00000559067 PEG3Q9GZU2 1588 aa30.71■■■□□ 2.51
NTRK3-213ENST00000559067 HMGXB3Q12766 1538 aa30.7■■■□□ 2.51
NTRK3-213ENST00000559067 BAZ1BQ9UIG0 1483 aaKnown RBP30.64■■■□□ 2.5
NTRK3-213ENST00000559067 WIZO95785 1651 aa30.52■■■□□ 2.48
NTRK3-213ENST00000559067 RSF1Q96T23 1441 aaPredicted RBP30.47■■■□□ 2.47
NTRK3-213ENST00000559067 TOP2AP11388 1531 aaKnown RBP30.22■■■□□ 2.43
NTRK3-213ENST00000559067 LAMC3Q9Y6N6 1575 aa30.04■■■□□ 2.4
NTRK3-213ENST00000559067 NESP48681 1621 aa30.03■■■□□ 2.4
NTRK3-213ENST00000559067 ERCC6Q03468 1493 aa30■■■□□ 2.39
NTRK3-213ENST00000559067 CADPSQ9ULU8 1353 aa29.91■■■□□ 2.38
NTRK3-213ENST00000559067 SUPT5HO00267 1087 aaKnown RBP29.84■■■□□ 2.37
NTRK3-213ENST00000559067 PDS5BQ9NTI5 1447 aa29.84■■■□□ 2.37
NTRK3-213ENST00000559067 CCDC88BA6NC98 1476 aa29.81■■■□□ 2.36
NTRK3-213ENST00000559067 KIF21AQ7Z4S6 1674 aa29.75■■■□□ 2.35
NTRK3-213ENST00000559067 CFTRP13569 1480 aa29.74■■■□□ 2.35
NTRK3-213ENST00000559067 PRDM2Q13029 1718 aa29.65■■■□□ 2.34
NTRK3-213ENST00000559067 FANCD2Q9BXW9 1451 aa29.61■■■□□ 2.33
NTRK3-213ENST00000559067 CUX2O14529 1486 aa29.6■■■□□ 2.33
NTRK3-213ENST00000559067 CEP164Q9UPV0 1460 aa29.6■■■□□ 2.33
NTRK3-213ENST00000559067 THOC2Q8NI27 1593 aaKnown RBP29.59■■■□□ 2.33
NTRK3-213ENST00000559067 MRC2Q9UBG0 1479 aa29.51■■■□□ 2.31
NTRK3-213ENST00000559067 WDR62O43379 1518 aa29.39■■■□□ 2.3
NTRK3-213ENST00000559067 URB2Q14146 1524 aaKnown RBP29.26■■■□□ 2.27
NTRK3-213ENST00000559067 ABCC8Q09428 1581 aa29.18■■■□□ 2.26
NTRK3-213ENST00000559067 DNMBPQ6XZF7 1577 aa29.13■■■□□ 2.25
NTRK3-213ENST00000559067 TOPBP1Q92547 1522 aa29.12■■■□□ 2.25
NTRK3-213ENST00000559067 IFT140Q96RY7 1462 aa28.94■■■□□ 2.22
NTRK3-213ENST00000559067 CUX1P39880 1505 aa28.92■■■□□ 2.22
NTRK3-213ENST00000559067 POLA1P09884 1462 aaPredicted RBP28.87■■■□□ 2.21
NTRK3-213ENST00000559067 FGD5Q6ZNL6 1462 aa28.83■■■□□ 2.21
NTRK3-213ENST00000559067 WRNQ14191 1432 aaPredicted RBP eCLIP28.79■■■□□ 2.2
NTRK3-213ENST00000559067 TARBP1Q13395 1621 aaKnown RBP28.79■■■□□ 2.2
NTRK3-213ENST00000559067 SOGA1O94964 1423 aa28.77■■■□□ 2.2
NTRK3-213ENST00000559067 ZNF608Q9ULD9 1512 aaPredicted RBP28.74■■■□□ 2.19
NTRK3-213ENST00000559067 RAD54L2Q9Y4B4 1467 aa28.73■■■□□ 2.19
NTRK3-213ENST00000559067 TOP2BQ02880 1626 aa28.72■■■□□ 2.19
NTRK3-213ENST00000559067 BIVM-ERCC5R4GMW8 1640 aa28.72■■■□□ 2.19
NTRK3-213ENST00000559067 EIF4G3O43432 1585 aaKnown RBP28.71■■■□□ 2.19
NTRK3-213ENST00000559067 SYNJ1O43426 1573 aa28.69■■■□□ 2.18
NTRK3-213ENST00000559067 WDR97A6NE52 1622 aa28.63■■■□□ 2.17
NTRK3-213ENST00000559067 AQRO60306 1485 aaKnown RBP eCLIP28.61■■■□□ 2.17
NTRK3-213ENST00000559067 TDRD9Q8NDG6 1382 aaKnown RBP28.58■■■□□ 2.17
NTRK3-213ENST00000559067 ABCA10Q8WWZ4 1543 aa28.54■■■□□ 2.16
NTRK3-213ENST00000559067 DNAJC5Q9H3Z4 198 aa28.53■■■□□ 2.16
NTRK3-213ENST00000559067 GAPVD1Q14C86 1478 aa28.46■■■□□ 2.15
NTRK3-213ENST00000559067 GRIN2BQ13224 1484 aa28.45■■■□□ 2.14
NTRK3-213ENST00000559067 PBRM1Q86U86 1689 aa28.44■■■□□ 2.14
NTRK3-213ENST00000559067 ABCA5Q8WWZ7 1642 aa28.43■■■□□ 2.14
NTRK3-213ENST00000559067 SNAPC4Q5SXM2 1469 aa28.39■■■□□ 2.13
NTRK3-213ENST00000559067 OSCARQ8IYS5 282 aa28.38■■■□□ 2.13
NTRK3-213ENST00000559067 MAGI1Q96QZ7 1491 aaPredicted RBP28.37■■■□□ 2.13
NTRK3-213ENST00000559067 CHD1O14646 1710 aa28.35■■■□□ 2.13
NTRK3-213ENST00000559067 FBLN2P98095 1184 aa28.35■■■□□ 2.13
NTRK3-213ENST00000559067 CHMP7Q8WUX9 453 aaPredicted RBP28.26■■■□□ 2.11
NTRK3-213ENST00000559067 SYNJ2O15056 1496 aa28.25■■■□□ 2.11
NTRK3-213ENST00000559067 ERICH3Q5RHP9 1530 aa28.23■■■□□ 2.11
NTRK3-213ENST00000559067 KIF27Q86VH2 1401 aa28.22■■■□□ 2.11
NTRK3-213ENST00000559067 TRIM41Q8WV44 630 aa28.2■■■□□ 2.1
NTRK3-213ENST00000559067 ADAMTS12P58397 1594 aa28.18■■■□□ 2.1
NTRK3-213ENST00000559067 FHAD1B1AJZ9 1412 aa28.13■■■□□ 2.09
NTRK3-213ENST00000559067 GRIN2AQ12879 1464 aa28.07■■■□□ 2.08
NTRK3-213ENST00000559067 CUL7Q14999 1698 aa28.04■■■□□ 2.08
NTRK3-213ENST00000559067 IGF1RP08069 1367 aa27.99■■■□□ 2.07
NTRK3-213ENST00000559067 CLASP1Q7Z460 1538 aa27.98■■■□□ 2.07
NTRK3-213ENST00000559067 RIMBP3CA6NJZ7 1639 aa27.92■■■□□ 2.06
NTRK3-213ENST00000559067 RIMBP3BA6NNM3 1639 aa27.92■■■□□ 2.06
NTRK3-213ENST00000559067 RIMBP3Q9UFD9 1639 aa27.92■■■□□ 2.06
NTRK3-213ENST00000559067 ARHGEF11O15085 1522 aa27.91■■■□□ 2.06
NTRK3-213ENST00000559067 NUP160Q12769 1436 aa27.91■■■□□ 2.06
NTRK3-213ENST00000559067 CEP170Q5SW79 1584 aa27.9■■■□□ 2.06
NTRK3-213ENST00000559067 CARMIL1Q5VZK9 1371 aa27.89■■■□□ 2.06
NTRK3-213ENST00000559067 RUSC2Q8N2Y8 1516 aa27.87■■■□□ 2.05
NTRK3-213ENST00000559067 CHIC1Q5VXU3 224 aa27.82■■■□□ 2.04
NTRK3-213ENST00000559067 RAPGEF2Q9Y4G8 1499 aa27.76■■■□□ 2.03
NTRK3-213ENST00000559067 EEA1Q15075 1411 aa27.74■■■□□ 2.03
NTRK3-213ENST00000559067 SHROOM2Q13796 1616 aa27.7■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 247.7 ms