RNA–Protein interactions for RNA: ENST00000559035.5

HMG20A-207, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-207ENST00000559035 NISCHQ9Y2I1 1504 aa19.61■□□□□ 0.73
HMG20A-207ENST00000559035 ABCC9O60706 1549 aa17.96■□□□□ 0.47
HMG20A-207ENST00000559035 CCDC180Q9P1Z9 1646 aa17.8■□□□□ 0.44
HMG20A-207ENST00000559035 DNAJC5BQ9UF47 199 aa17.1■□□□□ 0.33
HMG20A-207ENST00000559035 RB1CC1Q8TDY2 1594 aa17.02■□□□□ 0.31
HMG20A-207ENST00000559035 NACADO15069 1562 aa16.84■□□□□ 0.29
HMG20A-207ENST00000559035 UNC13AQ9UPW8 1703 aa16.68■□□□□ 0.26
HMG20A-207ENST00000559035 BICRAQ9NZM4 1560 aa16.6■□□□□ 0.25
HMG20A-207ENST00000559035 PABPN1Q86U42 306 aaKnown RBP eCLIP16.58■□□□□ 0.24
HMG20A-207ENST00000559035 MYO15BQ96JP2 1530 aa16.58■□□□□ 0.24
HMG20A-207ENST00000559035 SHROOM4Q9ULL8 1493 aa16.38■□□□□ 0.21
HMG20A-207ENST00000559035 DCAF8L2P0C7V8 631 aa16.36■□□□□ 0.21
HMG20A-207ENST00000559035 CC2D2AQ9P2K1 1620 aa16.27■□□□□ 0.19
HMG20A-207ENST00000559035 DCAF1Q9Y4B6 1507 aa16.24■□□□□ 0.19
HMG20A-207ENST00000559035 ZCCHC6Q5VYS8 1495 aaKnown RBP16.24■□□□□ 0.19
HMG20A-207ENST00000559035 CECR2Q9BXF3 1484 aa16.22■□□□□ 0.19
HMG20A-207ENST00000559035 EIF4G1Q04637 1599 aaKnown RBP16.18■□□□□ 0.18
HMG20A-207ENST00000559035 SCRIBQ14160 1630 aa16.12■□□□□ 0.17
HMG20A-207ENST00000559035 DNAJC5Q9H3Z4 198 aa15.9■□□□□ 0.14
HMG20A-207ENST00000559035 CUX2O14529 1486 aa15.67■□□□□ 0.1
HMG20A-207ENST00000559035 NCAPD3P42695 1498 aa15.54■□□□□ 0.08
HMG20A-207ENST00000559035 ERCC6Q03468 1493 aa15.49■□□□□ 0.07
HMG20A-207ENST00000559035 HMGXB3Q12766 1538 aa15.46■□□□□ 0.07
HMG20A-207ENST00000559035 ATAD2BQ9ULI0 1458 aa15.45■□□□□ 0.06
HMG20A-207ENST00000559035 SMARCA2P51531 1590 aa15.39■□□□□ 0.05
HMG20A-207ENST00000559035 SMARCA4P51532 1647 aa15.39■□□□□ 0.05
HMG20A-207ENST00000559035 THOC2Q8NI27 1593 aaKnown RBP15.38■□□□□ 0.05
HMG20A-207ENST00000559035 NESP48681 1621 aa15.37■□□□□ 0.05
HMG20A-207ENST00000559035 PEG3Q9GZU2 1588 aa15.29■□□□□ 0.04
HMG20A-207ENST00000559035 LAMC3Q9Y6N6 1575 aa15.25■□□□□ 0.03
HMG20A-207ENST00000559035 BAZ1BQ9UIG0 1483 aaKnown RBP15.25■□□□□ 0.03
HMG20A-207ENST00000559035 BAZ1AQ9NRL2 1556 aaPredicted RBP15.24■□□□□ 0.03
HMG20A-207ENST00000559035 KIF21AQ7Z4S6 1674 aa15.2■□□□□ 0.02
HMG20A-207ENST00000559035 MROH2BQ7Z745 1585 aa15.1■□□□□ 0.01
HMG20A-207ENST00000559035 PDS5BQ9NTI5 1447 aa15.09■□□□□ 0.01
HMG20A-207ENST00000559035 WDR62O43379 1518 aa15.07■□□□□ 0
HMG20A-207ENST00000559035 MRC2Q9UBG0 1479 aa15.04■□□□□ -0
HMG20A-207ENST00000559035 CADPSQ9ULU8 1353 aa15□□□□□ -0.01
HMG20A-207ENST00000559035 TRIM41Q8WV44 630 aa14.96□□□□□ -0.01
HMG20A-207ENST00000559035 CEP164Q9UPV0 1460 aa14.9□□□□□ -0.02
HMG20A-207ENST00000559035 WIZO95785 1651 aa14.89□□□□□ -0.03
HMG20A-207ENST00000559035 FANCD2Q9BXW9 1451 aa14.85□□□□□ -0.03
HMG20A-207ENST00000559035 CFTRP13569 1480 aa14.82□□□□□ -0.04
HMG20A-207ENST00000559035 URB2Q14146 1524 aaKnown RBP14.79□□□□□ -0.04
HMG20A-207ENST00000559035 RIMBP3CA6NJZ7 1639 aa14.74□□□□□ -0.05
HMG20A-207ENST00000559035 RIMBP3BA6NNM3 1639 aa14.74□□□□□ -0.05
HMG20A-207ENST00000559035 RIMBP3Q9UFD9 1639 aa14.74□□□□□ -0.05
HMG20A-207ENST00000559035 OSCARQ8IYS5 282 aa14.73□□□□□ -0.05
HMG20A-207ENST00000559035 TOP2AP11388 1531 aaKnown RBP14.72□□□□□ -0.05
HMG20A-207ENST00000559035 PRDM2Q13029 1718 aa14.69□□□□□ -0.06
HMG20A-207ENST00000559035 ARHGEF11O15085 1522 aa14.66□□□□□ -0.06
HMG20A-207ENST00000559035 RSF1Q96T23 1441 aaPredicted RBP14.66□□□□□ -0.06
HMG20A-207ENST00000559035 ZNF608Q9ULD9 1512 aaPredicted RBP14.64□□□□□ -0.07
HMG20A-207ENST00000559035 IFT140Q96RY7 1462 aa14.63□□□□□ -0.07
HMG20A-207ENST00000559035 EIF4G3O43432 1585 aaKnown RBP14.59□□□□□ -0.07
HMG20A-207ENST00000559035 TOPBP1Q92547 1522 aa14.56□□□□□ -0.08
HMG20A-207ENST00000559035 ARAP1Q96P48 1450 aa14.51□□□□□ -0.09
HMG20A-207ENST00000559035 CHD1O14646 1710 aa14.51□□□□□ -0.09
HMG20A-207ENST00000559035 TARBP1Q13395 1621 aaKnown RBP14.51□□□□□ -0.09
HMG20A-207ENST00000559035 DNMBPQ6XZF7 1577 aa14.5□□□□□ -0.09
HMG20A-207ENST00000559035 CCDC88BA6NC98 1476 aa14.49□□□□□ -0.09
HMG20A-207ENST00000559035 ABCC8Q09428 1581 aa14.47□□□□□ -0.09
HMG20A-207ENST00000559035 AQRO60306 1485 aaKnown RBP eCLIP14.4□□□□□ -0.1
HMG20A-207ENST00000559035 POLA1P09884 1462 aaPredicted RBP14.4□□□□□ -0.1
HMG20A-207ENST00000559035 CYB5RLQ6IPT4 315 aa14.39□□□□□ -0.11
HMG20A-207ENST00000559035 CLASP1Q7Z460 1538 aa14.39□□□□□ -0.11
HMG20A-207ENST00000559035 WDR97A6NE52 1622 aa14.36□□□□□ -0.11
HMG20A-207ENST00000559035 SNAPC4Q5SXM2 1469 aa14.31□□□□□ -0.12
HMG20A-207ENST00000559035 RAD54L2Q9Y4B4 1467 aa14.3□□□□□ -0.12
HMG20A-207ENST00000559035 SYNJ1O43426 1573 aa14.28□□□□□ -0.12
HMG20A-207ENST00000559035 MAGI1Q96QZ7 1491 aaPredicted RBP14.27□□□□□ -0.12
HMG20A-207ENST00000559035 TRHP20396 242 aaPredicted RBP14.27□□□□□ -0.13
HMG20A-207ENST00000559035 FGD5Q6ZNL6 1462 aa14.25□□□□□ -0.13
HMG20A-207ENST00000559035 TDRD9Q8NDG6 1382 aaKnown RBP14.24□□□□□ -0.13
HMG20A-207ENST00000559035 SOGA1O94964 1423 aa14.24□□□□□ -0.13
HMG20A-207ENST00000559035 FBLN2P98095 1184 aa14.22□□□□□ -0.13
HMG20A-207ENST00000559035 CUX1P39880 1505 aa14.21□□□□□ -0.13
HMG20A-207ENST00000559035 SYNJ2O15056 1496 aa14.21□□□□□ -0.13
HMG20A-207ENST00000559035 GRIN2BQ13224 1484 aa14.21□□□□□ -0.13
HMG20A-207ENST00000559035 PBRM1Q86U86 1689 aa14.18□□□□□ -0.14
HMG20A-207ENST00000559035 GAPVD1Q14C86 1478 aa14.16□□□□□ -0.14
HMG20A-207ENST00000559035 ABCA5Q8WWZ7 1642 aa14.15□□□□□ -0.14
HMG20A-207ENST00000559035 CHMP7Q8WUX9 453 aaPredicted RBP14.11□□□□□ -0.15
HMG20A-207ENST00000559035 ERCC6L2Q5T890 1561 aa14.1□□□□□ -0.15
HMG20A-207ENST00000559035 ABCA10Q8WWZ4 1543 aa14.1□□□□□ -0.15
HMG20A-207ENST00000559035 ADAMTS12P58397 1594 aa14.06□□□□□ -0.16
HMG20A-207ENST00000559035 SHROOM2Q13796 1616 aa14.05□□□□□ -0.16
HMG20A-207ENST00000559035 AEBP2Q6ZN18 517 aaPredicted RBP14.05□□□□□ -0.16
HMG20A-207ENST00000559035 NUP160Q12769 1436 aa14.05□□□□□ -0.16
HMG20A-207ENST00000559035 GRIN2AQ12879 1464 aa14.05□□□□□ -0.16
HMG20A-207ENST00000559035 CEP170Q5SW79 1584 aa14.05□□□□□ -0.16
HMG20A-207ENST00000559035 KIF13AQ9H1H9 1805 aa14□□□□□ -0.17
HMG20A-207ENST00000559035 BIVM-ERCC5R4GMW8 1640 aa13.94□□□□□ -0.18
HMG20A-207ENST00000559035 FHAD1B1AJZ9 1412 aa13.92□□□□□ -0.18
HMG20A-207ENST00000559035 ERICH3Q5RHP9 1530 aa13.91□□□□□ -0.18
HMG20A-207ENST00000559035 TOP2BQ02880 1626 aa13.91□□□□□ -0.18
HMG20A-207ENST00000559035 WRNQ14191 1432 aaPredicted RBP eCLIP13.9□□□□□ -0.18
HMG20A-207ENST00000559035 RUSC2Q8N2Y8 1516 aa13.88□□□□□ -0.19
HMG20A-207ENST00000559035 MAPKBP1O60336 1514 aa13.87□□□□□ -0.19
HMG20A-207ENST00000559035 DIP2BQ9P265 1576 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms