RNA–Protein interactions for RNA: ENST00000558949.1

LEO1-203, Transcript of LEO1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene LEO1, Length 630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEO1-203ENST00000558949 NISCHQ9Y2I1 1504 aa27.91■■■□□ 2.06
LEO1-203ENST00000558949 ABCC9O60706 1549 aa25.28■■□□□ 1.64
LEO1-203ENST00000558949 CCDC180Q9P1Z9 1646 aa25.04■■□□□ 1.6
LEO1-203ENST00000558949 DNAJC5BQ9UF47 199 aa24.02■■□□□ 1.44
LEO1-203ENST00000558949 RB1CC1Q8TDY2 1594 aa23.95■■□□□ 1.42
LEO1-203ENST00000558949 NACADO15069 1562 aa23.77■■□□□ 1.4
LEO1-203ENST00000558949 DCAF8L2P0C7V8 631 aa23.57■■□□□ 1.36
LEO1-203ENST00000558949 PABPN1Q86U42 306 aaKnown RBP eCLIP23.55■■□□□ 1.36
LEO1-203ENST00000558949 MYO15BQ96JP2 1530 aa23.43■■□□□ 1.34
LEO1-203ENST00000558949 UNC13AQ9UPW8 1703 aa23.38■■□□□ 1.33
LEO1-203ENST00000558949 BICRAQ9NZM4 1560 aa23.34■■□□□ 1.33
LEO1-203ENST00000558949 ZCCHC6Q5VYS8 1495 aaKnown RBP23.08■■□□□ 1.29
LEO1-203ENST00000558949 DCAF1Q9Y4B6 1507 aa23.05■■□□□ 1.28
LEO1-203ENST00000558949 SHROOM4Q9ULL8 1493 aa22.96■■□□□ 1.27
LEO1-203ENST00000558949 CC2D2AQ9P2K1 1620 aa22.82■■□□□ 1.24
LEO1-203ENST00000558949 CECR2Q9BXF3 1484 aa22.8■■□□□ 1.24
LEO1-203ENST00000558949 SCRIBQ14160 1630 aa22.8■■□□□ 1.24
LEO1-203ENST00000558949 EIF4G1Q04637 1599 aaKnown RBP22.73■■□□□ 1.23
LEO1-203ENST00000558949 DNAJC5Q9H3Z4 198 aa22.16■■□□□ 1.14
LEO1-203ENST00000558949 NCAPD3P42695 1498 aa22.01■■□□□ 1.11
LEO1-203ENST00000558949 ATAD2BQ9ULI0 1458 aa21.9■■□□□ 1.1
LEO1-203ENST00000558949 CUX2O14529 1486 aa21.87■■□□□ 1.09
LEO1-203ENST00000558949 ERCC6Q03468 1493 aa21.78■■□□□ 1.08
LEO1-203ENST00000558949 SMARCA4P51532 1647 aa21.77■■□□□ 1.07
LEO1-203ENST00000558949 HMGXB3Q12766 1538 aa21.76■■□□□ 1.07
LEO1-203ENST00000558949 SMARCA2P51531 1590 aa21.76■■□□□ 1.07
LEO1-203ENST00000558949 NESP48681 1621 aa21.69■■□□□ 1.06
LEO1-203ENST00000558949 BAZ1AQ9NRL2 1556 aaPredicted RBP21.63■■□□□ 1.05
LEO1-203ENST00000558949 BAZ1BQ9UIG0 1483 aaKnown RBP21.6■■□□□ 1.05
LEO1-203ENST00000558949 PEG3Q9GZU2 1588 aa21.6■■□□□ 1.05
LEO1-203ENST00000558949 MROH2BQ7Z745 1585 aa21.51■■□□□ 1.03
LEO1-203ENST00000558949 THOC2Q8NI27 1593 aaKnown RBP21.48■■□□□ 1.03
LEO1-203ENST00000558949 LAMC3Q9Y6N6 1575 aa21.45■■□□□ 1.02
LEO1-203ENST00000558949 PDS5BQ9NTI5 1447 aa21.36■■□□□ 1.01
LEO1-203ENST00000558949 KIF21AQ7Z4S6 1674 aa21.32■■□□□ 1
LEO1-203ENST00000558949 CADPSQ9ULU8 1353 aa21.32■■□□□ 1
LEO1-203ENST00000558949 WIZO95785 1651 aa21.19■□□□□ 0.98
LEO1-203ENST00000558949 MRC2Q9UBG0 1479 aa21.19■□□□□ 0.98
LEO1-203ENST00000558949 WDR62O43379 1518 aa21.15■□□□□ 0.98
LEO1-203ENST00000558949 CEP164Q9UPV0 1460 aa21.05■□□□□ 0.96
LEO1-203ENST00000558949 CFTRP13569 1480 aa21.03■□□□□ 0.96
LEO1-203ENST00000558949 FANCD2Q9BXW9 1451 aa21.03■□□□□ 0.96
LEO1-203ENST00000558949 RSF1Q96T23 1441 aaPredicted RBP21.02■□□□□ 0.96
LEO1-203ENST00000558949 TRIM41Q8WV44 630 aa21■□□□□ 0.95
LEO1-203ENST00000558949 TOP2AP11388 1531 aaKnown RBP20.92■□□□□ 0.94
LEO1-203ENST00000558949 URB2Q14146 1524 aaKnown RBP20.9■□□□□ 0.94
LEO1-203ENST00000558949 OSCARQ8IYS5 282 aa20.86■□□□□ 0.93
LEO1-203ENST00000558949 CCDC88BA6NC98 1476 aa20.73■□□□□ 0.91
LEO1-203ENST00000558949 ZNF608Q9ULD9 1512 aaPredicted RBP20.68■□□□□ 0.9
LEO1-203ENST00000558949 IFT140Q96RY7 1462 aa20.66■□□□□ 0.9
LEO1-203ENST00000558949 PRDM2Q13029 1718 aa20.65■□□□□ 0.9
LEO1-203ENST00000558949 TOPBP1Q92547 1522 aa20.63■□□□□ 0.89
LEO1-203ENST00000558949 RIMBP3CA6NJZ7 1639 aa20.56■□□□□ 0.88
LEO1-203ENST00000558949 RIMBP3BA6NNM3 1639 aa20.56■□□□□ 0.88
LEO1-203ENST00000558949 RIMBP3Q9UFD9 1639 aa20.56■□□□□ 0.88
LEO1-203ENST00000558949 ABCC8Q09428 1581 aa20.54■□□□□ 0.88
LEO1-203ENST00000558949 ARHGEF11O15085 1522 aa20.51■□□□□ 0.87
LEO1-203ENST00000558949 DNMBPQ6XZF7 1577 aa20.5■□□□□ 0.87
LEO1-203ENST00000558949 EIF4G3O43432 1585 aaKnown RBP20.48■□□□□ 0.87
LEO1-203ENST00000558949 AQRO60306 1485 aaKnown RBP eCLIP20.46■□□□□ 0.87
LEO1-203ENST00000558949 TARBP1Q13395 1621 aaKnown RBP20.45■□□□□ 0.86
LEO1-203ENST00000558949 POLA1P09884 1462 aaPredicted RBP20.41■□□□□ 0.86
LEO1-203ENST00000558949 CYB5RLQ6IPT4 315 aa20.38■□□□□ 0.85
LEO1-203ENST00000558949 RAD54L2Q9Y4B4 1467 aa20.35■□□□□ 0.85
LEO1-203ENST00000558949 CHD1O14646 1710 aa20.33■□□□□ 0.85
LEO1-203ENST00000558949 ARAP1Q96P48 1450 aa20.31■□□□□ 0.84
LEO1-203ENST00000558949 SOGA1O94964 1423 aa20.31■□□□□ 0.84
LEO1-203ENST00000558949 TDRD9Q8NDG6 1382 aaKnown RBP20.31■□□□□ 0.84
LEO1-203ENST00000558949 FBLN2P98095 1184 aa20.3■□□□□ 0.84
LEO1-203ENST00000558949 FGD5Q6ZNL6 1462 aa20.24■□□□□ 0.83
LEO1-203ENST00000558949 SNAPC4Q5SXM2 1469 aa20.21■□□□□ 0.83
LEO1-203ENST00000558949 CUX1P39880 1505 aa20.21■□□□□ 0.83
LEO1-203ENST00000558949 WDR97A6NE52 1622 aa20.19■□□□□ 0.82
LEO1-203ENST00000558949 CLASP1Q7Z460 1538 aa20.18■□□□□ 0.82
LEO1-203ENST00000558949 AEBP2Q6ZN18 517 aaPredicted RBP20.16■□□□□ 0.82
LEO1-203ENST00000558949 TRHP20396 242 aaPredicted RBP20.15■□□□□ 0.82
LEO1-203ENST00000558949 CHMP7Q8WUX9 453 aaPredicted RBP20.15■□□□□ 0.82
LEO1-203ENST00000558949 MAGI1Q96QZ7 1491 aaPredicted RBP20.15■□□□□ 0.82
LEO1-203ENST00000558949 GRIN2BQ13224 1484 aa20.14■□□□□ 0.81
LEO1-203ENST00000558949 SYNJ2O15056 1496 aa20.1■□□□□ 0.81
LEO1-203ENST00000558949 SYNJ1O43426 1573 aa20.08■□□□□ 0.81
LEO1-203ENST00000558949 GAPVD1Q14C86 1478 aa20.04■□□□□ 0.8
LEO1-203ENST00000558949 ABCA10Q8WWZ4 1543 aa20.02■□□□□ 0.79
LEO1-203ENST00000558949 ABCA5Q8WWZ7 1642 aa19.97■□□□□ 0.79
LEO1-203ENST00000558949 PBRM1Q86U86 1689 aa19.96■□□□□ 0.79
LEO1-203ENST00000558949 SUPT5HO00267 1087 aaKnown RBP19.88■□□□□ 0.77
LEO1-203ENST00000558949 GRIN2AQ12879 1464 aa19.87■□□□□ 0.77
LEO1-203ENST00000558949 WRNQ14191 1432 aaPredicted RBP eCLIP19.87■□□□□ 0.77
LEO1-203ENST00000558949 ERCC6L2Q5T890 1561 aa19.87■□□□□ 0.77
LEO1-203ENST00000558949 NUP160Q12769 1436 aa19.86■□□□□ 0.77
LEO1-203ENST00000558949 ADAMTS12P58397 1594 aa19.82■□□□□ 0.76
LEO1-203ENST00000558949 CEP170Q5SW79 1584 aa19.82■□□□□ 0.76
LEO1-203ENST00000558949 TOP2BQ02880 1626 aa19.8■□□□□ 0.76
LEO1-203ENST00000558949 FHAD1B1AJZ9 1412 aa19.79■□□□□ 0.76
LEO1-203ENST00000558949 BIVM-ERCC5R4GMW8 1640 aa19.78■□□□□ 0.76
LEO1-203ENST00000558949 SHROOM2Q13796 1616 aa19.76■□□□□ 0.75
LEO1-203ENST00000558949 ERICH3Q5RHP9 1530 aa19.73■□□□□ 0.75
LEO1-203ENST00000558949 JPH4Q96JJ6 628 aa19.66■□□□□ 0.74
LEO1-203ENST00000558949 PRG4Q92954 1404 aaPredicted RBP19.66■□□□□ 0.74
LEO1-203ENST00000558949 KIF13AQ9H1H9 1805 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms