RNA–Protein interactions for RNA: ENST00000558933.5

IDH3A-210, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 3

Gene IDH3A, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-210ENST00000558933 NISCHQ9Y2I1 1504 aa34.04■■■■□ 3.04
IDH3A-210ENST00000558933 CCDC180Q9P1Z9 1646 aa30.62■■■□□ 2.49
IDH3A-210ENST00000558933 ABCC9O60706 1549 aa30.2■■■□□ 2.42
IDH3A-210ENST00000558933 RB1CC1Q8TDY2 1594 aa28.99■■■□□ 2.23
IDH3A-210ENST00000558933 NACADO15069 1562 aa28.83■■■□□ 2.21
IDH3A-210ENST00000558933 DCAF8L2P0C7V8 631 aa28.53■■■□□ 2.16
IDH3A-210ENST00000558933 MYO15BQ96JP2 1530 aa28.5■■■□□ 2.15
IDH3A-210ENST00000558933 UNC13AQ9UPW8 1703 aa28.29■■■□□ 2.12
IDH3A-210ENST00000558933 ZCCHC6Q5VYS8 1495 aaKnown RBP28.28■■■□□ 2.12
IDH3A-210ENST00000558933 DCAF1Q9Y4B6 1507 aa28.2■■■□□ 2.1
IDH3A-210ENST00000558933 PABPN1Q86U42 306 aaKnown RBP eCLIP28.04■■■□□ 2.08
IDH3A-210ENST00000558933 BICRAQ9NZM4 1560 aa27.99■■■□□ 2.07
IDH3A-210ENST00000558933 DNAJC5BQ9UF47 199 aa27.92■■■□□ 2.06
IDH3A-210ENST00000558933 SHROOM4Q9ULL8 1493 aa27.85■■■□□ 2.05
IDH3A-210ENST00000558933 SCRIBQ14160 1630 aa27.79■■■□□ 2.04
IDH3A-210ENST00000558933 EIF4G1Q04637 1599 aaKnown RBP27.36■■□□□ 1.97
IDH3A-210ENST00000558933 CC2D2AQ9P2K1 1620 aa27.35■■□□□ 1.97
IDH3A-210ENST00000558933 CECR2Q9BXF3 1484 aa27.22■■□□□ 1.95
IDH3A-210ENST00000558933 SMARCA4P51532 1647 aa26.56■■□□□ 1.84
IDH3A-210ENST00000558933 SMARCA2P51531 1590 aa26.52■■□□□ 1.84
IDH3A-210ENST00000558933 NCAPD3P42695 1498 aa26.51■■□□□ 1.83
IDH3A-210ENST00000558933 BAZ1AQ9NRL2 1556 aaPredicted RBP26.5■■□□□ 1.83
IDH3A-210ENST00000558933 ATAD2BQ9ULI0 1458 aa26.45■■□□□ 1.82
IDH3A-210ENST00000558933 HMGXB3Q12766 1538 aa26.44■■□□□ 1.82
IDH3A-210ENST00000558933 PEG3Q9GZU2 1588 aa26.31■■□□□ 1.8
IDH3A-210ENST00000558933 BAZ1BQ9UIG0 1483 aaKnown RBP26.29■■□□□ 1.8
IDH3A-210ENST00000558933 MROH2BQ7Z745 1585 aa26.17■■□□□ 1.78
IDH3A-210ENST00000558933 ERCC6Q03468 1493 aa26.17■■□□□ 1.78
IDH3A-210ENST00000558933 CUX2O14529 1486 aa26.05■■□□□ 1.76
IDH3A-210ENST00000558933 LAMC3Q9Y6N6 1575 aa25.99■■□□□ 1.75
IDH3A-210ENST00000558933 NESP48681 1621 aa25.96■■□□□ 1.75
IDH3A-210ENST00000558933 WIZO95785 1651 aa25.91■■□□□ 1.74
IDH3A-210ENST00000558933 PDS5BQ9NTI5 1447 aa25.8■■□□□ 1.72
IDH3A-210ENST00000558933 THOC2Q8NI27 1593 aaKnown RBP25.78■■□□□ 1.72
IDH3A-210ENST00000558933 KIF21AQ7Z4S6 1674 aa25.77■■□□□ 1.72
IDH3A-210ENST00000558933 CADPSQ9ULU8 1353 aa25.7■■□□□ 1.71
IDH3A-210ENST00000558933 RSF1Q96T23 1441 aaPredicted RBP25.7■■□□□ 1.7
IDH3A-210ENST00000558933 TOP2AP11388 1531 aaKnown RBP25.68■■□□□ 1.7
IDH3A-210ENST00000558933 DNAJC5Q9H3Z4 198 aa25.62■■□□□ 1.69
IDH3A-210ENST00000558933 MRC2Q9UBG0 1479 aa25.55■■□□□ 1.68
IDH3A-210ENST00000558933 CEP164Q9UPV0 1460 aa25.52■■□□□ 1.68
IDH3A-210ENST00000558933 WDR62O43379 1518 aa25.49■■□□□ 1.67
IDH3A-210ENST00000558933 CFTRP13569 1480 aa25.48■■□□□ 1.67
IDH3A-210ENST00000558933 FANCD2Q9BXW9 1451 aa25.45■■□□□ 1.66
IDH3A-210ENST00000558933 PRDM2Q13029 1718 aa25.44■■□□□ 1.66
IDH3A-210ENST00000558933 CCDC88BA6NC98 1476 aa25.27■■□□□ 1.64
IDH3A-210ENST00000558933 URB2Q14146 1524 aaKnown RBP25.18■■□□□ 1.62
IDH3A-210ENST00000558933 ABCC8Q09428 1581 aa25.05■■□□□ 1.6
IDH3A-210ENST00000558933 TOPBP1Q92547 1522 aa24.99■■□□□ 1.59
IDH3A-210ENST00000558933 DNMBPQ6XZF7 1577 aa24.98■■□□□ 1.59
IDH3A-210ENST00000558933 IFT140Q96RY7 1462 aa24.98■■□□□ 1.59
IDH3A-210ENST00000558933 EIF4G3O43432 1585 aaKnown RBP24.82■■□□□ 1.56
IDH3A-210ENST00000558933 ZNF608Q9ULD9 1512 aaPredicted RBP24.81■■□□□ 1.56
IDH3A-210ENST00000558933 OSCARQ8IYS5 282 aa24.79■■□□□ 1.56
IDH3A-210ENST00000558933 TARBP1Q13395 1621 aaKnown RBP24.76■■□□□ 1.55
IDH3A-210ENST00000558933 POLA1P09884 1462 aaPredicted RBP24.74■■□□□ 1.55
IDH3A-210ENST00000558933 SUPT5HO00267 1087 aaKnown RBP24.68■■□□□ 1.54
IDH3A-210ENST00000558933 WDR97A6NE52 1622 aa24.68■■□□□ 1.54
IDH3A-210ENST00000558933 FGD5Q6ZNL6 1462 aa24.63■■□□□ 1.53
IDH3A-210ENST00000558933 TRIM41Q8WV44 630 aa24.61■■□□□ 1.53
IDH3A-210ENST00000558933 CUX1P39880 1505 aa24.61■■□□□ 1.53
IDH3A-210ENST00000558933 SOGA1O94964 1423 aa24.61■■□□□ 1.53
IDH3A-210ENST00000558933 AQRO60306 1485 aaKnown RBP eCLIP24.6■■□□□ 1.53
IDH3A-210ENST00000558933 CHD1O14646 1710 aa24.6■■□□□ 1.53
IDH3A-210ENST00000558933 RAD54L2Q9Y4B4 1467 aa24.58■■□□□ 1.52
IDH3A-210ENST00000558933 RIMBP3CA6NJZ7 1639 aa24.51■■□□□ 1.51
IDH3A-210ENST00000558933 RIMBP3BA6NNM3 1639 aa24.51■■□□□ 1.51
IDH3A-210ENST00000558933 RIMBP3Q9UFD9 1639 aa24.51■■□□□ 1.51
IDH3A-210ENST00000558933 TDRD9Q8NDG6 1382 aaKnown RBP24.48■■□□□ 1.51
IDH3A-210ENST00000558933 MAGI1Q96QZ7 1491 aaPredicted RBP24.45■■□□□ 1.51
IDH3A-210ENST00000558933 ARHGEF11O15085 1522 aa24.45■■□□□ 1.5
IDH3A-210ENST00000558933 SNAPC4Q5SXM2 1469 aa24.45■■□□□ 1.5
IDH3A-210ENST00000558933 GRIN2BQ13224 1484 aa24.44■■□□□ 1.5
IDH3A-210ENST00000558933 PBRM1Q86U86 1689 aa24.43■■□□□ 1.5
IDH3A-210ENST00000558933 FBLN2P98095 1184 aa24.43■■□□□ 1.5
IDH3A-210ENST00000558933 ABCA10Q8WWZ4 1543 aa24.38■■□□□ 1.49
IDH3A-210ENST00000558933 BIVM-ERCC5R4GMW8 1640 aa24.38■■□□□ 1.49
IDH3A-210ENST00000558933 SYNJ1O43426 1573 aa24.37■■□□□ 1.49
IDH3A-210ENST00000558933 ABCA5Q8WWZ7 1642 aa24.36■■□□□ 1.49
IDH3A-210ENST00000558933 GAPVD1Q14C86 1478 aa24.35■■□□□ 1.49
IDH3A-210ENST00000558933 TOP2BQ02880 1626 aa24.35■■□□□ 1.49
IDH3A-210ENST00000558933 SYNJ2O15056 1496 aa24.33■■□□□ 1.49
IDH3A-210ENST00000558933 WRNQ14191 1432 aaPredicted RBP eCLIP24.33■■□□□ 1.49
IDH3A-210ENST00000558933 CHMP7Q8WUX9 453 aaPredicted RBP24.31■■□□□ 1.48
IDH3A-210ENST00000558933 CLASP1Q7Z460 1538 aa24.27■■□□□ 1.48
IDH3A-210ENST00000558933 ARAP1Q96P48 1450 aa24.19■■□□□ 1.46
IDH3A-210ENST00000558933 ADAMTS12P58397 1594 aa24.17■■□□□ 1.46
IDH3A-210ENST00000558933 CYB5RLQ6IPT4 315 aa24.15■■□□□ 1.46
IDH3A-210ENST00000558933 ERICH3Q5RHP9 1530 aa24.12■■□□□ 1.45
IDH3A-210ENST00000558933 GRIN2AQ12879 1464 aa24.12■■□□□ 1.45
IDH3A-210ENST00000558933 FHAD1B1AJZ9 1412 aa24.07■■□□□ 1.44
IDH3A-210ENST00000558933 NUP160Q12769 1436 aa24■■□□□ 1.43
IDH3A-210ENST00000558933 CEP170Q5SW79 1584 aa23.99■■□□□ 1.43
IDH3A-210ENST00000558933 SHROOM2Q13796 1616 aa23.92■■□□□ 1.42
IDH3A-210ENST00000558933 CUL7Q14999 1698 aa23.89■■□□□ 1.41
IDH3A-210ENST00000558933 KIF27Q86VH2 1401 aa23.87■■□□□ 1.41
IDH3A-210ENST00000558933 TRHP20396 242 aaPredicted RBP23.87■■□□□ 1.41
IDH3A-210ENST00000558933 RUSC2Q8N2Y8 1516 aa23.84■■□□□ 1.41
IDH3A-210ENST00000558933 ERCC6L2Q5T890 1561 aa23.81■■□□□ 1.4
IDH3A-210ENST00000558933 PRG4Q92954 1404 aaPredicted RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms