RNA–Protein interactions for RNA: ENST00000558892.1

USP8-206, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-206ENST00000558892 NISCHQ9Y2I1 1504 aa37.2■■■■□ 3.55
USP8-206ENST00000558892 ABCC9O60706 1549 aa34.01■■■■□ 3.04
USP8-206ENST00000558892 CCDC180Q9P1Z9 1646 aa33.58■■■□□ 2.97
USP8-206ENST00000558892 DNAJC5BQ9UF47 199 aa32.29■■■□□ 2.76
USP8-206ENST00000558892 RB1CC1Q8TDY2 1594 aa32.19■■■□□ 2.74
USP8-206ENST00000558892 NACADO15069 1562 aa31.86■■■□□ 2.69
USP8-206ENST00000558892 DCAF8L2P0C7V8 631 aa31.64■■■□□ 2.66
USP8-206ENST00000558892 PABPN1Q86U42 306 aaKnown RBP eCLIP31.61■■■□□ 2.65
USP8-206ENST00000558892 UNC13AQ9UPW8 1703 aa31.44■■■□□ 2.62
USP8-206ENST00000558892 MYO15BQ96JP2 1530 aa31.28■■■□□ 2.6
USP8-206ENST00000558892 BICRAQ9NZM4 1560 aa31.23■■■□□ 2.59
USP8-206ENST00000558892 SHROOM4Q9ULL8 1493 aa30.81■■■□□ 2.52
USP8-206ENST00000558892 ZCCHC6Q5VYS8 1495 aaKnown RBP30.72■■■□□ 2.51
USP8-206ENST00000558892 CC2D2AQ9P2K1 1620 aa30.7■■■□□ 2.51
USP8-206ENST00000558892 DCAF1Q9Y4B6 1507 aa30.7■■■□□ 2.51
USP8-206ENST00000558892 CECR2Q9BXF3 1484 aa30.7■■■□□ 2.5
USP8-206ENST00000558892 SCRIBQ14160 1630 aa30.56■■■□□ 2.48
USP8-206ENST00000558892 EIF4G1Q04637 1599 aaKnown RBP30.53■■■□□ 2.48
USP8-206ENST00000558892 DNAJC5Q9H3Z4 198 aa30.01■■■□□ 2.39
USP8-206ENST00000558892 CUX2O14529 1486 aa29.52■■■□□ 2.32
USP8-206ENST00000558892 ERCC6Q03468 1493 aa29.43■■■□□ 2.3
USP8-206ENST00000558892 NCAPD3P42695 1498 aa29.42■■■□□ 2.3
USP8-206ENST00000558892 ATAD2BQ9ULI0 1458 aa29.25■■■□□ 2.27
USP8-206ENST00000558892 SMARCA2P51531 1590 aa29.17■■■□□ 2.26
USP8-206ENST00000558892 HMGXB3Q12766 1538 aa29.15■■■□□ 2.26
USP8-206ENST00000558892 SMARCA4P51532 1647 aa29.11■■■□□ 2.25
USP8-206ENST00000558892 NESP48681 1621 aa29.08■■■□□ 2.25
USP8-206ENST00000558892 BAZ1BQ9UIG0 1483 aaKnown RBP28.97■■■□□ 2.23
USP8-206ENST00000558892 BAZ1AQ9NRL2 1556 aaPredicted RBP28.92■■■□□ 2.22
USP8-206ENST00000558892 THOC2Q8NI27 1593 aaKnown RBP28.87■■■□□ 2.21
USP8-206ENST00000558892 PEG3Q9GZU2 1588 aa28.84■■■□□ 2.21
USP8-206ENST00000558892 LAMC3Q9Y6N6 1575 aa28.83■■■□□ 2.21
USP8-206ENST00000558892 PDS5BQ9NTI5 1447 aa28.69■■■□□ 2.18
USP8-206ENST00000558892 KIF21AQ7Z4S6 1674 aa28.69■■■□□ 2.18
USP8-206ENST00000558892 MROH2BQ7Z745 1585 aa28.65■■■□□ 2.18
USP8-206ENST00000558892 TRIM41Q8WV44 630 aa28.52■■■□□ 2.16
USP8-206ENST00000558892 CADPSQ9ULU8 1353 aa28.5■■■□□ 2.15
USP8-206ENST00000558892 MRC2Q9UBG0 1479 aa28.46■■■□□ 2.15
USP8-206ENST00000558892 WDR62O43379 1518 aa28.38■■■□□ 2.13
USP8-206ENST00000558892 WIZO95785 1651 aa28.29■■■□□ 2.12
USP8-206ENST00000558892 CEP164Q9UPV0 1460 aa28.26■■■□□ 2.11
USP8-206ENST00000558892 FANCD2Q9BXW9 1451 aa28.19■■■□□ 2.1
USP8-206ENST00000558892 OSCARQ8IYS5 282 aa28.12■■■□□ 2.09
USP8-206ENST00000558892 CFTRP13569 1480 aa28.08■■■□□ 2.09
USP8-206ENST00000558892 URB2Q14146 1524 aaKnown RBP27.97■■■□□ 2.07
USP8-206ENST00000558892 TOP2AP11388 1531 aaKnown RBP27.91■■■□□ 2.06
USP8-206ENST00000558892 RSF1Q96T23 1441 aaPredicted RBP27.9■■■□□ 2.06
USP8-206ENST00000558892 PRDM2Q13029 1718 aa27.76■■■□□ 2.03
USP8-206ENST00000558892 RIMBP3CA6NJZ7 1639 aa27.76■■■□□ 2.03
USP8-206ENST00000558892 RIMBP3BA6NNM3 1639 aa27.76■■■□□ 2.03
USP8-206ENST00000558892 RIMBP3Q9UFD9 1639 aa27.76■■■□□ 2.03
USP8-206ENST00000558892 IFT140Q96RY7 1462 aa27.71■■■□□ 2.03
USP8-206ENST00000558892 ZNF608Q9ULD9 1512 aaPredicted RBP27.69■■■□□ 2.02
USP8-206ENST00000558892 ARHGEF11O15085 1522 aa27.63■■■□□ 2.01
USP8-206ENST00000558892 CCDC88BA6NC98 1476 aa27.59■■■□□ 2.01
USP8-206ENST00000558892 TOPBP1Q92547 1522 aa27.59■■■□□ 2.01
USP8-206ENST00000558892 ABCC8Q09428 1581 aa27.53■■■□□ 2
USP8-206ENST00000558892 EIF4G3O43432 1585 aaKnown RBP27.52■■■□□ 2
USP8-206ENST00000558892 CYB5RLQ6IPT4 315 aa27.48■■□□□ 1.99
USP8-206ENST00000558892 DNMBPQ6XZF7 1577 aa27.46■■□□□ 1.99
USP8-206ENST00000558892 CHD1O14646 1710 aa27.41■■□□□ 1.98
USP8-206ENST00000558892 AQRO60306 1485 aaKnown RBP eCLIP27.39■■□□□ 1.985e-9■■□□□ 13.1
USP8-206ENST00000558892 TARBP1Q13395 1621 aaKnown RBP27.37■■□□□ 1.97
USP8-206ENST00000558892 FBLN2P98095 1184 aa27.35■■□□□ 1.97
USP8-206ENST00000558892 TRHP20396 242 aaPredicted RBP27.34■■□□□ 1.97
USP8-206ENST00000558892 ARAP1Q96P48 1450 aa27.32■■□□□ 1.96
USP8-206ENST00000558892 POLA1P09884 1462 aaPredicted RBP27.28■■□□□ 1.96
USP8-206ENST00000558892 RAD54L2Q9Y4B4 1467 aa27.19■■□□□ 1.94
USP8-206ENST00000558892 SOGA1O94964 1423 aa27.17■■□□□ 1.94
USP8-206ENST00000558892 TDRD9Q8NDG6 1382 aaKnown RBP27.17■■□□□ 1.94
USP8-206ENST00000558892 SNAPC4Q5SXM2 1469 aa27.1■■□□□ 1.93
USP8-206ENST00000558892 WDR97A6NE52 1622 aa27.08■■□□□ 1.93
USP8-206ENST00000558892 CHMP7Q8WUX9 453 aaPredicted RBP27.08■■□□□ 1.93
USP8-206ENST00000558892 CLASP1Q7Z460 1538 aa27.07■■□□□ 1.92
USP8-206ENST00000558892 FGD5Q6ZNL6 1462 aa27.05■■□□□ 1.92
USP8-206ENST00000558892 SYNJ1O43426 1573 aa27.04■■□□□ 1.92
USP8-206ENST00000558892 MAGI1Q96QZ7 1491 aaPredicted RBP27.03■■□□□ 1.92
USP8-206ENST00000558892 GRIN2BQ13224 1484 aa26.99■■□□□ 1.91
USP8-206ENST00000558892 SYNJ2O15056 1496 aa26.94■■□□□ 1.9
USP8-206ENST00000558892 CUX1P39880 1505 aa26.94■■□□□ 1.9
USP8-206ENST00000558892 AEBP2Q6ZN18 517 aaPredicted RBP26.89■■□□□ 1.9
USP8-206ENST00000558892 GAPVD1Q14C86 1478 aa26.83■■□□□ 1.89
USP8-206ENST00000558892 PBRM1Q86U86 1689 aa26.82■■□□□ 1.88
USP8-206ENST00000558892 ABCA10Q8WWZ4 1543 aa26.72■■□□□ 1.87
USP8-206ENST00000558892 ABCA5Q8WWZ7 1642 aa26.7■■□□□ 1.86
USP8-206ENST00000558892 GRIN2AQ12879 1464 aa26.62■■□□□ 1.85
USP8-206ENST00000558892 ERCC6L2Q5T890 1561 aa26.6■■□□□ 1.85
USP8-206ENST00000558892 WRNQ14191 1432 aaPredicted RBP eCLIP26.56■■□□□ 1.84
USP8-206ENST00000558892 CEP170Q5SW79 1584 aa26.55■■□□□ 1.84
USP8-206ENST00000558892 NUP160Q12769 1436 aa26.55■■□□□ 1.84
USP8-206ENST00000558892 ADAMTS12P58397 1594 aa26.54■■□□□ 1.84
USP8-206ENST00000558892 FHAD1B1AJZ9 1412 aa26.48■■□□□ 1.83
USP8-206ENST00000558892 SHROOM2Q13796 1616 aa26.47■■□□□ 1.83
USP8-206ENST00000558892 TOP2BQ02880 1626 aa26.4■■□□□ 1.82
USP8-206ENST00000558892 BIVM-ERCC5R4GMW8 1640 aa26.39■■□□□ 1.82
USP8-206ENST00000558892 ERICH3Q5RHP9 1530 aa26.39■■□□□ 1.81
USP8-206ENST00000558892 SUPT5HO00267 1087 aaKnown RBP26.37■■□□□ 1.81
USP8-206ENST00000558892 KIF13AQ9H1H9 1805 aa26.37■■□□□ 1.81
USP8-206ENST00000558892 PRG4Q92954 1404 aaPredicted RBP26.35■■□□□ 1.81
USP8-206ENST00000558892 JPH4Q96JJ6 628 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms