RNA–Protein interactions for RNA: ENST00000558869.1

ALDH1A3-205, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

TSL 4

Gene ALDH1A3, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-205ENST00000558869 NISCHQ9Y2I1 1504 aa36.5■■■■□ 3.43
ALDH1A3-205ENST00000558869 CCDC180Q9P1Z9 1646 aa32.66■■■□□ 2.82
ALDH1A3-205ENST00000558869 ABCC9O60706 1549 aa32.16■■■□□ 2.74
ALDH1A3-205ENST00000558869 RB1CC1Q8TDY2 1594 aa30.86■■■□□ 2.53
ALDH1A3-205ENST00000558869 NACADO15069 1562 aa30.75■■■□□ 2.51
ALDH1A3-205ENST00000558869 DCAF8L2P0C7V8 631 aa30.52■■■□□ 2.48
ALDH1A3-205ENST00000558869 MYO15BQ96JP2 1530 aa30.5■■■□□ 2.47
ALDH1A3-205ENST00000558869 ZCCHC6Q5VYS8 1495 aaKnown RBP30.34■■■□□ 2.45
ALDH1A3-205ENST00000558869 DCAF1Q9Y4B6 1507 aa30.23■■■□□ 2.43
ALDH1A3-205ENST00000558869 UNC13AQ9UPW8 1703 aa30.21■■■□□ 2.43
ALDH1A3-205ENST00000558869 PABPN1Q86U42 306 aaKnown RBP eCLIP29.97■■■□□ 2.39
ALDH1A3-205ENST00000558869 BICRAQ9NZM4 1560 aa29.94■■■□□ 2.38
ALDH1A3-205ENST00000558869 DNAJC5BQ9UF47 199 aa29.81■■■□□ 2.36
ALDH1A3-205ENST00000558869 SCRIBQ14160 1630 aa29.69■■■□□ 2.34
ALDH1A3-205ENST00000558869 SHROOM4Q9ULL8 1493 aa29.64■■■□□ 2.34
ALDH1A3-205ENST00000558869 EIF4G1Q04637 1599 aaKnown RBP29.17■■■□□ 2.26
ALDH1A3-205ENST00000558869 CC2D2AQ9P2K1 1620 aa29.13■■■□□ 2.25
ALDH1A3-205ENST00000558869 CECR2Q9BXF3 1484 aa28.96■■■□□ 2.23
ALDH1A3-205ENST00000558869 SMARCA4P51532 1647 aa28.4■■■□□ 2.14
ALDH1A3-205ENST00000558869 NCAPD3P42695 1498 aa28.37■■■□□ 2.13
ALDH1A3-205ENST00000558869 BAZ1AQ9NRL2 1556 aaPredicted RBP28.33■■■□□ 2.12
ALDH1A3-205ENST00000558869 ATAD2BQ9ULI0 1458 aa28.32■■■□□ 2.12
ALDH1A3-205ENST00000558869 SMARCA2P51531 1590 aa28.28■■■□□ 2.12
ALDH1A3-205ENST00000558869 HMGXB3Q12766 1538 aa28.22■■■□□ 2.11
ALDH1A3-205ENST00000558869 PEG3Q9GZU2 1588 aa28.17■■■□□ 2.1
ALDH1A3-205ENST00000558869 MROH2BQ7Z745 1585 aa28.1■■■□□ 2.09
ALDH1A3-205ENST00000558869 BAZ1BQ9UIG0 1483 aaKnown RBP28.06■■■□□ 2.08
ALDH1A3-205ENST00000558869 WIZO95785 1651 aa27.79■■■□□ 2.04
ALDH1A3-205ENST00000558869 ERCC6Q03468 1493 aa27.76■■■□□ 2.03
ALDH1A3-205ENST00000558869 NESP48681 1621 aa27.74■■■□□ 2.03
ALDH1A3-205ENST00000558869 LAMC3Q9Y6N6 1575 aa27.69■■■□□ 2.02
ALDH1A3-205ENST00000558869 RSF1Q96T23 1441 aaPredicted RBP27.66■■■□□ 2.02
ALDH1A3-205ENST00000558869 CUX2O14529 1486 aa27.64■■■□□ 2.01
ALDH1A3-205ENST00000558869 CADPSQ9ULU8 1353 aa27.5■■□□□ 1.99
ALDH1A3-205ENST00000558869 TOP2AP11388 1531 aaKnown RBP27.49■■□□□ 1.99
ALDH1A3-205ENST00000558869 PDS5BQ9NTI5 1447 aa27.48■■□□□ 1.99
ALDH1A3-205ENST00000558869 KIF21AQ7Z4S6 1674 aa27.46■■□□□ 1.99
ALDH1A3-205ENST00000558869 THOC2Q8NI27 1593 aaKnown RBP27.45■■□□□ 1.99
ALDH1A3-205ENST00000558869 CFTRP13569 1480 aa27.28■■□□□ 1.96
ALDH1A3-205ENST00000558869 MRC2Q9UBG0 1479 aa27.22■■□□□ 1.95
ALDH1A3-205ENST00000558869 FANCD2Q9BXW9 1451 aa27.19■■□□□ 1.94
ALDH1A3-205ENST00000558869 CEP164Q9UPV0 1460 aa27.19■■□□□ 1.94
ALDH1A3-205ENST00000558869 WDR62O43379 1518 aa27.17■■□□□ 1.94
ALDH1A3-205ENST00000558869 CCDC88BA6NC98 1476 aa27.14■■□□□ 1.94
ALDH1A3-205ENST00000558869 DNAJC5Q9H3Z4 198 aa27.14■■□□□ 1.94
ALDH1A3-205ENST00000558869 PRDM2Q13029 1718 aa27.13■■□□□ 1.93
ALDH1A3-205ENST00000558869 URB2Q14146 1524 aaKnown RBP26.93■■□□□ 1.9
ALDH1A3-205ENST00000558869 ABCC8Q09428 1581 aa26.73■■□□□ 1.87
ALDH1A3-205ENST00000558869 TOPBP1Q92547 1522 aa26.72■■□□□ 1.87
ALDH1A3-205ENST00000558869 DNMBPQ6XZF7 1577 aa26.67■■□□□ 1.86
ALDH1A3-205ENST00000558869 IFT140Q96RY7 1462 aa26.64■■□□□ 1.86
ALDH1A3-205ENST00000558869 SUPT5HO00267 1087 aaKnown RBP26.63■■□□□ 1.85
ALDH1A3-205ENST00000558869 ZNF608Q9ULD9 1512 aaPredicted RBP26.51■■□□□ 1.83
ALDH1A3-205ENST00000558869 TARBP1Q13395 1621 aaKnown RBP26.48■■□□□ 1.83
ALDH1A3-205ENST00000558869 POLA1P09884 1462 aaPredicted RBP26.47■■□□□ 1.83
ALDH1A3-205ENST00000558869 EIF4G3O43432 1585 aaKnown RBP26.44■■□□□ 1.82
ALDH1A3-205ENST00000558869 OSCARQ8IYS5 282 aa26.39■■□□□ 1.82
ALDH1A3-205ENST00000558869 CUX1P39880 1505 aa26.39■■□□□ 1.81
ALDH1A3-205ENST00000558869 FGD5Q6ZNL6 1462 aa26.35■■□□□ 1.81
ALDH1A3-205ENST00000558869 SOGA1O94964 1423 aa26.33■■□□□ 1.81
ALDH1A3-205ENST00000558869 RAD54L2Q9Y4B4 1467 aa26.33■■□□□ 1.81
ALDH1A3-205ENST00000558869 AQRO60306 1485 aaKnown RBP eCLIP26.32■■□□□ 1.8
ALDH1A3-205ENST00000558869 WDR97A6NE52 1622 aa26.29■■□□□ 1.8
ALDH1A3-205ENST00000558869 TDRD9Q8NDG6 1382 aaKnown RBP26.2■■□□□ 1.79
ALDH1A3-205ENST00000558869 CHD1O14646 1710 aa26.19■■□□□ 1.78
ALDH1A3-205ENST00000558869 BIVM-ERCC5R4GMW8 1640 aa26.12■■□□□ 1.77
ALDH1A3-205ENST00000558869 TOP2BQ02880 1626 aa26.1■■□□□ 1.77
ALDH1A3-205ENST00000558869 ABCA10Q8WWZ4 1543 aa26.09■■□□□ 1.77
ALDH1A3-205ENST00000558869 WRNQ14191 1432 aaPredicted RBP eCLIP26.09■■□□□ 1.77
ALDH1A3-205ENST00000558869 GRIN2BQ13224 1484 aa26.09■■□□□ 1.77
ALDH1A3-205ENST00000558869 SNAPC4Q5SXM2 1469 aa26.08■■□□□ 1.77
ALDH1A3-205ENST00000558869 MAGI1Q96QZ7 1491 aaPredicted RBP26.07■■□□□ 1.76
ALDH1A3-205ENST00000558869 SYNJ1O43426 1573 aa26.05■■□□□ 1.76
ALDH1A3-205ENST00000558869 PBRM1Q86U86 1689 aa26.05■■□□□ 1.76
ALDH1A3-205ENST00000558869 GAPVD1Q14C86 1478 aa26.04■■□□□ 1.76
ALDH1A3-205ENST00000558869 TRIM41Q8WV44 630 aa26.04■■□□□ 1.76
ALDH1A3-205ENST00000558869 RIMBP3CA6NJZ7 1639 aa26.03■■□□□ 1.76
ALDH1A3-205ENST00000558869 RIMBP3BA6NNM3 1639 aa26.03■■□□□ 1.76
ALDH1A3-205ENST00000558869 ABCA5Q8WWZ7 1642 aa26.03■■□□□ 1.76
ALDH1A3-205ENST00000558869 RIMBP3Q9UFD9 1639 aa26.03■■□□□ 1.76
ALDH1A3-205ENST00000558869 FBLN2P98095 1184 aa26.03■■□□□ 1.76
ALDH1A3-205ENST00000558869 ARHGEF11O15085 1522 aa25.98■■□□□ 1.75
ALDH1A3-205ENST00000558869 SYNJ2O15056 1496 aa25.97■■□□□ 1.75
ALDH1A3-205ENST00000558869 CHMP7Q8WUX9 453 aaPredicted RBP25.94■■□□□ 1.74
ALDH1A3-205ENST00000558869 CLASP1Q7Z460 1538 aa25.88■■□□□ 1.73
ALDH1A3-205ENST00000558869 ADAMTS12P58397 1594 aa25.8■■□□□ 1.72
ALDH1A3-205ENST00000558869 ERICH3Q5RHP9 1530 aa25.79■■□□□ 1.72
ALDH1A3-205ENST00000558869 GRIN2AQ12879 1464 aa25.75■■□□□ 1.71
ALDH1A3-205ENST00000558869 ARAP1Q96P48 1450 aa25.74■■□□□ 1.71
ALDH1A3-205ENST00000558869 FHAD1B1AJZ9 1412 aa25.73■■□□□ 1.71
ALDH1A3-205ENST00000558869 CYB5RLQ6IPT4 315 aa25.71■■□□□ 1.71
ALDH1A3-205ENST00000558869 NUP160Q12769 1436 aa25.66■■□□□ 1.7
ALDH1A3-205ENST00000558869 CEP170Q5SW79 1584 aa25.65■■□□□ 1.7
ALDH1A3-205ENST00000558869 KIF27Q86VH2 1401 aa25.57■■□□□ 1.68
ALDH1A3-205ENST00000558869 SHROOM2Q13796 1616 aa25.54■■□□□ 1.68
ALDH1A3-205ENST00000558869 CUL7Q14999 1698 aa25.51■■□□□ 1.67
ALDH1A3-205ENST00000558869 IGF1RP08069 1367 aa25.5■■□□□ 1.67
ALDH1A3-205ENST00000558869 ERCC6L2Q5T890 1561 aa25.46■■□□□ 1.67
ALDH1A3-205ENST00000558869 RUSC2Q8N2Y8 1516 aa25.43■■□□□ 1.66
ALDH1A3-205ENST00000558869 JPH4Q96JJ6 628 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms