RNA–Protein interactions for RNA: ENST00000558859.5

CPNE6-209, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-209ENST00000558859 NISCHQ9Y2I1 1504 aa37.19■■■■□ 3.54
CPNE6-209ENST00000558859 ABCC9O60706 1549 aa34.16■■■■□ 3.06
CPNE6-209ENST00000558859 CCDC180Q9P1Z9 1646 aa33.66■■■□□ 2.98
CPNE6-209ENST00000558859 DNAJC5BQ9UF47 199 aa32.72■■■□□ 2.83
CPNE6-209ENST00000558859 RB1CC1Q8TDY2 1594 aa32.29■■■□□ 2.76
CPNE6-209ENST00000558859 NACADO15069 1562 aa31.97■■■□□ 2.71
CPNE6-209ENST00000558859 PABPN1Q86U42 306 aaKnown RBP eCLIP31.69■■■□□ 2.66
CPNE6-209ENST00000558859 UNC13AQ9UPW8 1703 aa31.63■■■□□ 2.65
CPNE6-209ENST00000558859 BICRAQ9NZM4 1560 aa31.46■■■□□ 2.63
CPNE6-209ENST00000558859 DCAF8L2P0C7V8 631 aa31.43■■■□□ 2.62
CPNE6-209ENST00000558859 MYO15BQ96JP2 1530 aa31.41■■■□□ 2.62
CPNE6-209ENST00000558859 SHROOM4Q9ULL8 1493 aa30.98■■■□□ 2.55
CPNE6-209ENST00000558859 CC2D2AQ9P2K1 1620 aa30.9■■■□□ 2.54
CPNE6-209ENST00000558859 CECR2Q9BXF3 1484 aa30.88■■■□□ 2.53
CPNE6-209ENST00000558859 DCAF1Q9Y4B6 1507 aa30.75■■■□□ 2.51
CPNE6-209ENST00000558859 ZCCHC6Q5VYS8 1495 aaKnown RBP30.69■■■□□ 2.5
CPNE6-209ENST00000558859 EIF4G1Q04637 1599 aaKnown RBP30.68■■■□□ 2.5
CPNE6-209ENST00000558859 SCRIBQ14160 1630 aa30.51■■■□□ 2.48
CPNE6-209ENST00000558859 DNAJC5Q9H3Z4 198 aa30.51■■■□□ 2.47
CPNE6-209ENST00000558859 CUX2O14529 1486 aa29.78■■■□□ 2.36
CPNE6-209ENST00000558859 NCAPD3P42695 1498 aa29.55■■■□□ 2.32
CPNE6-209ENST00000558859 ERCC6Q03468 1493 aa29.49■■■□□ 2.31
CPNE6-209ENST00000558859 ATAD2BQ9ULI0 1458 aa29.34■■■□□ 2.29
CPNE6-209ENST00000558859 HMGXB3Q12766 1538 aa29.25■■■□□ 2.27
CPNE6-209ENST00000558859 NESP48681 1621 aa29.2■■■□□ 2.27
CPNE6-209ENST00000558859 SMARCA2P51531 1590 aa29.19■■■□□ 2.26
CPNE6-209ENST00000558859 SMARCA4P51532 1647 aa29.12■■■□□ 2.25
CPNE6-209ENST00000558859 THOC2Q8NI27 1593 aaKnown RBP29.09■■■□□ 2.25
CPNE6-209ENST00000558859 LAMC3Q9Y6N6 1575 aa28.94■■■□□ 2.22
CPNE6-209ENST00000558859 BAZ1BQ9UIG0 1483 aaKnown RBP28.94■■■□□ 2.22
CPNE6-209ENST00000558859 PEG3Q9GZU2 1588 aa28.93■■■□□ 2.22
CPNE6-209ENST00000558859 BAZ1AQ9NRL2 1556 aaPredicted RBP28.88■■■□□ 2.21
CPNE6-209ENST00000558859 KIF21AQ7Z4S6 1674 aa28.82■■■□□ 2.2
CPNE6-209ENST00000558859 PDS5BQ9NTI5 1447 aa28.76■■■□□ 2.19
CPNE6-209ENST00000558859 TRIM41Q8WV44 630 aa28.71■■■□□ 2.19
CPNE6-209ENST00000558859 MROH2BQ7Z745 1585 aa28.62■■■□□ 2.17
CPNE6-209ENST00000558859 CADPSQ9ULU8 1353 aa28.58■■■□□ 2.17
CPNE6-209ENST00000558859 MRC2Q9UBG0 1479 aa28.55■■■□□ 2.16
CPNE6-209ENST00000558859 WDR62O43379 1518 aa28.54■■■□□ 2.16
CPNE6-209ENST00000558859 CEP164Q9UPV0 1460 aa28.28■■■□□ 2.12
CPNE6-209ENST00000558859 OSCARQ8IYS5 282 aa28.27■■■□□ 2.12
CPNE6-209ENST00000558859 WIZO95785 1651 aa28.23■■■□□ 2.11
CPNE6-209ENST00000558859 FANCD2Q9BXW9 1451 aa28.21■■■□□ 2.11
CPNE6-209ENST00000558859 CFTRP13569 1480 aa28.15■■■□□ 2.1
CPNE6-209ENST00000558859 URB2Q14146 1524 aaKnown RBP28.06■■■□□ 2.08
CPNE6-209ENST00000558859 RIMBP3CA6NJZ7 1639 aa28■■■□□ 2.07
CPNE6-209ENST00000558859 RIMBP3BA6NNM3 1639 aa28■■■□□ 2.07
CPNE6-209ENST00000558859 RIMBP3Q9UFD9 1639 aa28■■■□□ 2.07
CPNE6-209ENST00000558859 ARHGEF11O15085 1522 aa27.84■■■□□ 2.05
CPNE6-209ENST00000558859 TOP2AP11388 1531 aaKnown RBP27.84■■■□□ 2.05
CPNE6-209ENST00000558859 RSF1Q96T23 1441 aaPredicted RBP27.82■■■□□ 2.04
CPNE6-209ENST00000558859 PRDM2Q13029 1718 aa27.81■■■□□ 2.04
CPNE6-209ENST00000558859 ZNF608Q9ULD9 1512 aaPredicted RBP27.8■■■□□ 2.04
CPNE6-209ENST00000558859 IFT140Q96RY7 1462 aa27.77■■■□□ 2.04
CPNE6-209ENST00000558859 TOPBP1Q92547 1522 aa27.63■■■□□ 2.01
CPNE6-209ENST00000558859 CYB5RLQ6IPT4 315 aa27.6■■■□□ 2.01
CPNE6-209ENST00000558859 EIF4G3O43432 1585 aaKnown RBP27.59■■■□□ 2.01
CPNE6-209ENST00000558859 CCDC88BA6NC98 1476 aa27.54■■■□□ 2
CPNE6-209ENST00000558859 ABCC8Q09428 1581 aa27.54■■■□□ 2
CPNE6-209ENST00000558859 ARAP1Q96P48 1450 aa27.54■■■□□ 2
CPNE6-209ENST00000558859 CHD1O14646 1710 aa27.52■■■□□ 2
CPNE6-209ENST00000558859 TARBP1Q13395 1621 aaKnown RBP27.47■■□□□ 1.99
CPNE6-209ENST00000558859 DNMBPQ6XZF7 1577 aa27.47■■□□□ 1.99
CPNE6-209ENST00000558859 AQRO60306 1485 aaKnown RBP eCLIP27.44■■□□□ 1.98
CPNE6-209ENST00000558859 TRHP20396 242 aaPredicted RBP27.42■■□□□ 1.98
CPNE6-209ENST00000558859 POLA1P09884 1462 aaPredicted RBP27.31■■□□□ 1.96
CPNE6-209ENST00000558859 FBLN2P98095 1184 aa27.26■■□□□ 1.95
CPNE6-209ENST00000558859 CLASP1Q7Z460 1538 aa27.24■■□□□ 1.95
CPNE6-209ENST00000558859 RAD54L2Q9Y4B4 1467 aa27.19■■□□□ 1.94
CPNE6-209ENST00000558859 WDR97A6NE52 1622 aa27.16■■□□□ 1.94
CPNE6-209ENST00000558859 TDRD9Q8NDG6 1382 aaKnown RBP27.16■■□□□ 1.94
CPNE6-209ENST00000558859 SOGA1O94964 1423 aa27.14■■□□□ 1.93
CPNE6-209ENST00000558859 SNAPC4Q5SXM2 1469 aa27.13■■□□□ 1.93
CPNE6-209ENST00000558859 SYNJ1O43426 1573 aa27.09■■□□□ 1.93
CPNE6-209ENST00000558859 MAGI1Q96QZ7 1491 aaPredicted RBP27.08■■□□□ 1.93
CPNE6-209ENST00000558859 AEBP2Q6ZN18 517 aaPredicted RBP27.07■■□□□ 1.92
CPNE6-209ENST00000558859 CHMP7Q8WUX9 453 aaPredicted RBP27.03■■□□□ 1.92
CPNE6-209ENST00000558859 FGD5Q6ZNL6 1462 aa27.02■■□□□ 1.92
CPNE6-209ENST00000558859 SYNJ2O15056 1496 aa26.99■■□□□ 1.91
CPNE6-209ENST00000558859 GRIN2BQ13224 1484 aa26.99■■□□□ 1.91
CPNE6-209ENST00000558859 GAPVD1Q14C86 1478 aa26.93■■□□□ 1.9
CPNE6-209ENST00000558859 CUX1P39880 1505 aa26.93■■□□□ 1.9
CPNE6-209ENST00000558859 PBRM1Q86U86 1689 aa26.84■■□□□ 1.89
CPNE6-209ENST00000558859 ABCA5Q8WWZ7 1642 aa26.74■■□□□ 1.87
CPNE6-209ENST00000558859 ERCC6L2Q5T890 1561 aa26.73■■□□□ 1.87
CPNE6-209ENST00000558859 ABCA10Q8WWZ4 1543 aa26.73■■□□□ 1.87
CPNE6-209ENST00000558859 GRIN2AQ12879 1464 aa26.65■■□□□ 1.86
CPNE6-209ENST00000558859 NUP160Q12769 1436 aa26.64■■□□□ 1.85
CPNE6-209ENST00000558859 CEP170Q5SW79 1584 aa26.63■■□□□ 1.85
CPNE6-209ENST00000558859 SHROOM2Q13796 1616 aa26.61■■□□□ 1.85
CPNE6-209ENST00000558859 KIF13AQ9H1H9 1805 aa26.6■■□□□ 1.85
CPNE6-209ENST00000558859 ADAMTS12P58397 1594 aa26.56■■□□□ 1.84
CPNE6-209ENST00000558859 FHAD1B1AJZ9 1412 aa26.46■■□□□ 1.83
CPNE6-209ENST00000558859 WRNQ14191 1432 aaPredicted RBP eCLIP26.44■■□□□ 1.82
CPNE6-209ENST00000558859 ERICH3Q5RHP9 1530 aa26.38■■□□□ 1.81
CPNE6-209ENST00000558859 PRG4Q92954 1404 aaPredicted RBP26.35■■□□□ 1.81
CPNE6-209ENST00000558859 BIVM-ERCC5R4GMW8 1640 aa26.35■■□□□ 1.81
CPNE6-209ENST00000558859 ABCC10Q5T3U5 1492 aa26.35■■□□□ 1.81
CPNE6-209ENST00000558859 TOP2BQ02880 1626 aa26.33■■□□□ 1.81
CPNE6-209ENST00000558859 JPH4Q96JJ6 628 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms