RNA–Protein interactions for RNA: ENST00000558820.5

TRIP4-205, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 2

Gene TRIP4, Length 847 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-205ENST00000558820 NISCHQ9Y2I1 1504 aa48.45■■■■■ 5.35
TRIP4-205ENST00000558820 CCDC180Q9P1Z9 1646 aa43.44■■■■■ 4.55
TRIP4-205ENST00000558820 ABCC9O60706 1549 aa42.91■■■■■ 4.46
TRIP4-205ENST00000558820 RB1CC1Q8TDY2 1594 aa41.09■■■■■ 4.17
TRIP4-205ENST00000558820 NACADO15069 1562 aa40.91■■■■■ 4.14
TRIP4-205ENST00000558820 DCAF8L2P0C7V8 631 aa40.52■■■■■ 4.08
TRIP4-205ENST00000558820 MYO15BQ96JP2 1530 aa40.49■■■■■ 4.07
TRIP4-205ENST00000558820 UNC13AQ9UPW8 1703 aa40.3■■■■■ 4.04
TRIP4-205ENST00000558820 ZCCHC6Q5VYS8 1495 aaKnown RBP40.26■■■■■ 4.03
TRIP4-205ENST00000558820 DCAF1Q9Y4B6 1507 aa40.1■■■■■ 4.01
TRIP4-205ENST00000558820 PABPN1Q86U42 306 aaKnown RBP eCLIP39.92■■■■□ 3.98
TRIP4-205ENST00000558820 BICRAQ9NZM4 1560 aa39.91■■■■□ 3.98
TRIP4-205ENST00000558820 DNAJC5BQ9UF47 199 aa39.88■■■■□ 3.97
TRIP4-205ENST00000558820 SCRIBQ14160 1630 aa39.51■■■■□ 3.91
TRIP4-205ENST00000558820 SHROOM4Q9ULL8 1493 aa39.43■■■■□ 3.9
TRIP4-205ENST00000558820 EIF4G1Q04637 1599 aaKnown RBP38.87■■■■□ 3.81
TRIP4-205ENST00000558820 CC2D2AQ9P2K1 1620 aa38.86■■■■□ 3.81
TRIP4-205ENST00000558820 CECR2Q9BXF3 1484 aa38.63■■■■□ 3.77
TRIP4-205ENST00000558820 SMARCA4P51532 1647 aa37.76■■■■□ 3.64
TRIP4-205ENST00000558820 NCAPD3P42695 1498 aa37.71■■■■□ 3.63
TRIP4-205ENST00000558820 ATAD2BQ9ULI0 1458 aa37.64■■■■□ 3.62
TRIP4-205ENST00000558820 SMARCA2P51531 1590 aa37.6■■■■□ 3.61
TRIP4-205ENST00000558820 BAZ1AQ9NRL2 1556 aaPredicted RBP37.6■■■■□ 3.61
TRIP4-205ENST00000558820 HMGXB3Q12766 1538 aa37.53■■■■□ 3.6
TRIP4-205ENST00000558820 PEG3Q9GZU2 1588 aa37.42■■■■□ 3.58
TRIP4-205ENST00000558820 MROH2BQ7Z745 1585 aa37.32■■■■□ 3.56
TRIP4-205ENST00000558820 BAZ1BQ9UIG0 1483 aaKnown RBP37.3■■■■□ 3.56
TRIP4-205ENST00000558820 ERCC6Q03468 1493 aa37.02■■■■□ 3.52
TRIP4-205ENST00000558820 NESP48681 1621 aa36.99■■■■□ 3.51
TRIP4-205ENST00000558820 WIZO95785 1651 aa36.93■■■■□ 3.5
TRIP4-205ENST00000558820 CUX2O14529 1486 aa36.89■■■■□ 3.5
TRIP4-205ENST00000558820 LAMC3Q9Y6N6 1575 aa36.86■■■■□ 3.49
TRIP4-205ENST00000558820 RSF1Q96T23 1441 aaPredicted RBP36.65■■■■□ 3.46
TRIP4-205ENST00000558820 KIF21AQ7Z4S6 1674 aa36.64■■■■□ 3.46
TRIP4-205ENST00000558820 THOC2Q8NI27 1593 aaKnown RBP36.64■■■■□ 3.46
TRIP4-205ENST00000558820 PDS5BQ9NTI5 1447 aa36.55■■■■□ 3.44
TRIP4-205ENST00000558820 CADPSQ9ULU8 1353 aa36.54■■■■□ 3.44
TRIP4-205ENST00000558820 TOP2AP11388 1531 aaKnown RBP36.49■■■■□ 3.43
TRIP4-205ENST00000558820 DNAJC5Q9H3Z4 198 aa36.37■■■■□ 3.41
TRIP4-205ENST00000558820 MRC2Q9UBG0 1479 aa36.25■■■■□ 3.39
TRIP4-205ENST00000558820 CFTRP13569 1480 aa36.24■■■■□ 3.39
TRIP4-205ENST00000558820 WDR62O43379 1518 aa36.19■■■■□ 3.38
TRIP4-205ENST00000558820 CEP164Q9UPV0 1460 aa36.17■■■■□ 3.38
TRIP4-205ENST00000558820 FANCD2Q9BXW9 1451 aa36.15■■■■□ 3.38
TRIP4-205ENST00000558820 PRDM2Q13029 1718 aa36.11■■■■□ 3.37
TRIP4-205ENST00000558820 CCDC88BA6NC98 1476 aa36.01■■■■□ 3.36
TRIP4-205ENST00000558820 URB2Q14146 1524 aaKnown RBP35.86■■■■□ 3.33
TRIP4-205ENST00000558820 TOPBP1Q92547 1522 aa35.53■■■■□ 3.28
TRIP4-205ENST00000558820 ABCC8Q09428 1581 aa35.48■■■■□ 3.27
TRIP4-205ENST00000558820 DNMBPQ6XZF7 1577 aa35.47■■■■□ 3.27
TRIP4-205ENST00000558820 IFT140Q96RY7 1462 aa35.43■■■■□ 3.26
TRIP4-205ENST00000558820 ZNF608Q9ULD9 1512 aaPredicted RBP35.32■■■■□ 3.25
TRIP4-205ENST00000558820 TARBP1Q13395 1621 aaKnown RBP35.24■■■■□ 3.23
TRIP4-205ENST00000558820 EIF4G3O43432 1585 aaKnown RBP35.23■■■■□ 3.23
TRIP4-205ENST00000558820 POLA1P09884 1462 aaPredicted RBP35.19■■■■□ 3.22
TRIP4-205ENST00000558820 SUPT5HO00267 1087 aaKnown RBP35.17■■■■□ 3.22
TRIP4-205ENST00000558820 OSCARQ8IYS5 282 aa35.16■■■■□ 3.22
TRIP4-205ENST00000558820 CUX1P39880 1505 aa35.06■■■■□ 3.2
TRIP4-205ENST00000558820 AQRO60306 1485 aaKnown RBP eCLIP35.02■■■■□ 3.21e-6■□□□□ 11
TRIP4-205ENST00000558820 FGD5Q6ZNL6 1462 aa35.01■■■■□ 3.19
TRIP4-205ENST00000558820 RAD54L2Q9Y4B4 1467 aa35.01■■■■□ 3.19
TRIP4-205ENST00000558820 SOGA1O94964 1423 aa34.98■■■■□ 3.19
TRIP4-205ENST00000558820 CHD1O14646 1710 aa34.95■■■■□ 3.19
TRIP4-205ENST00000558820 WDR97A6NE52 1622 aa34.95■■■■□ 3.18
TRIP4-205ENST00000558820 TRIM41Q8WV44 630 aa34.85■■■■□ 3.17
TRIP4-205ENST00000558820 TDRD9Q8NDG6 1382 aaKnown RBP34.84■■■■□ 3.17
TRIP4-205ENST00000558820 RIMBP3CA6NJZ7 1639 aa34.81■■■■□ 3.16
TRIP4-205ENST00000558820 RIMBP3BA6NNM3 1639 aa34.81■■■■□ 3.16
TRIP4-205ENST00000558820 RIMBP3Q9UFD9 1639 aa34.81■■■■□ 3.16
TRIP4-205ENST00000558820 SNAPC4Q5SXM2 1469 aa34.71■■■■□ 3.15
TRIP4-205ENST00000558820 ARHGEF11O15085 1522 aa34.69■■■■□ 3.14
TRIP4-205ENST00000558820 PBRM1Q86U86 1689 aa34.69■■■■□ 3.14
TRIP4-205ENST00000558820 BIVM-ERCC5R4GMW8 1640 aa34.67■■■■□ 3.14
TRIP4-205ENST00000558820 GRIN2BQ13224 1484 aa34.67■■■■□ 3.14
TRIP4-205ENST00000558820 MAGI1Q96QZ7 1491 aaPredicted RBP34.67■■■■□ 3.14
TRIP4-205ENST00000558820 ABCA10Q8WWZ4 1543 aa34.65■■■■□ 3.14
TRIP4-205ENST00000558820 TOP2BQ02880 1626 aa34.63■■■■□ 3.13
TRIP4-205ENST00000558820 ABCA5Q8WWZ7 1642 aa34.63■■■■□ 3.13
TRIP4-205ENST00000558820 FBLN2P98095 1184 aa34.62■■■■□ 3.13
TRIP4-205ENST00000558820 GAPVD1Q14C86 1478 aa34.59■■■■□ 3.13
TRIP4-205ENST00000558820 SYNJ1O43426 1573 aa34.58■■■■□ 3.13
TRIP4-205ENST00000558820 WRNQ14191 1432 aaPredicted RBP eCLIP34.56■■■■□ 3.12
TRIP4-205ENST00000558820 SYNJ2O15056 1496 aa34.53■■■■□ 3.12
TRIP4-205ENST00000558820 CLASP1Q7Z460 1538 aa34.5■■■■□ 3.11
TRIP4-205ENST00000558820 CHMP7Q8WUX9 453 aaPredicted RBP34.47■■■■□ 3.11
TRIP4-205ENST00000558820 ARAP1Q96P48 1450 aa34.38■■■■□ 3.09
TRIP4-205ENST00000558820 ADAMTS12P58397 1594 aa34.33■■■■□ 3.09
TRIP4-205ENST00000558820 CYB5RLQ6IPT4 315 aa34.28■■■■□ 3.08
TRIP4-205ENST00000558820 ERICH3Q5RHP9 1530 aa34.25■■■■□ 3.07
TRIP4-205ENST00000558820 GRIN2AQ12879 1464 aa34.24■■■■□ 3.07
TRIP4-205ENST00000558820 FHAD1B1AJZ9 1412 aa34.17■■■■□ 3.06
TRIP4-205ENST00000558820 CEP170Q5SW79 1584 aa34.14■■■■□ 3.06
TRIP4-205ENST00000558820 NUP160Q12769 1436 aa34.13■■■■□ 3.05
TRIP4-205ENST00000558820 SHROOM2Q13796 1616 aa34.01■■■■□ 3.04
TRIP4-205ENST00000558820 ERCC6L2Q5T890 1561 aa33.96■■■■□ 3.03
TRIP4-205ENST00000558820 KIF27Q86VH2 1401 aa33.88■■■■□ 3.01
TRIP4-205ENST00000558820 CUL7Q14999 1698 aa33.87■■■■□ 3.01
TRIP4-205ENST00000558820 RUSC2Q8N2Y8 1516 aa33.84■■■■□ 3.01
TRIP4-205ENST00000558820 IGF1RP08069 1367 aa33.8■■■■□ 3
TRIP4-205ENST00000558820 TRHP20396 242 aaPredicted RBP33.76■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms