RNA–Protein interactions for RNA: ENST00000558819.1

IGDCC4-203, Transcript of immunoglobulin superfamily DCC subclass member 4, humanhuman

TSL 4

Gene IGDCC4, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGDCC4-203ENST00000558819 NISCHQ9Y2I1 1504 aa21.08■□□□□ 0.96
IGDCC4-203ENST00000558819 ABCC9O60706 1549 aa19.47■□□□□ 0.71
IGDCC4-203ENST00000558819 CCDC180Q9P1Z9 1646 aa19.07■□□□□ 0.64
IGDCC4-203ENST00000558819 DNAJC5BQ9UF47 199 aa18.55■□□□□ 0.56
IGDCC4-203ENST00000558819 RB1CC1Q8TDY2 1594 aa18.32■□□□□ 0.52
IGDCC4-203ENST00000558819 NACADO15069 1562 aa18.09■□□□□ 0.49
IGDCC4-203ENST00000558819 PABPN1Q86U42 306 aaKnown RBP eCLIP18.06■□□□□ 0.48
IGDCC4-203ENST00000558819 DCAF8L2P0C7V8 631 aa17.99■□□□□ 0.47
IGDCC4-203ENST00000558819 UNC13AQ9UPW8 1703 aa17.96■□□□□ 0.47
IGDCC4-203ENST00000558819 BICRAQ9NZM4 1560 aa17.83■□□□□ 0.44
IGDCC4-203ENST00000558819 MYO15BQ96JP2 1530 aa17.67■□□□□ 0.42
IGDCC4-203ENST00000558819 CC2D2AQ9P2K1 1620 aa17.55■□□□□ 0.4
IGDCC4-203ENST00000558819 CECR2Q9BXF3 1484 aa17.55■□□□□ 0.4
IGDCC4-203ENST00000558819 SHROOM4Q9ULL8 1493 aa17.47■□□□□ 0.39
IGDCC4-203ENST00000558819 SCRIBQ14160 1630 aa17.43■□□□□ 0.38
IGDCC4-203ENST00000558819 EIF4G1Q04637 1599 aaKnown RBP17.42■□□□□ 0.38
IGDCC4-203ENST00000558819 ZCCHC6Q5VYS8 1495 aaKnown RBP17.41■□□□□ 0.38
IGDCC4-203ENST00000558819 DCAF1Q9Y4B6 1507 aa17.34■□□□□ 0.37
IGDCC4-203ENST00000558819 DNAJC5Q9H3Z4 198 aa17.24■□□□□ 0.35
IGDCC4-203ENST00000558819 CUX2O14529 1486 aa16.86■□□□□ 0.29
IGDCC4-203ENST00000558819 ERCC6Q03468 1493 aa16.82■□□□□ 0.28
IGDCC4-203ENST00000558819 NCAPD3P42695 1498 aa16.7■□□□□ 0.26
IGDCC4-203ENST00000558819 NESP48681 1621 aa16.63■□□□□ 0.25
IGDCC4-203ENST00000558819 ATAD2BQ9ULI0 1458 aa16.62■□□□□ 0.25
IGDCC4-203ENST00000558819 HMGXB3Q12766 1538 aa16.56■□□□□ 0.24
IGDCC4-203ENST00000558819 SMARCA2P51531 1590 aa16.55■□□□□ 0.24
IGDCC4-203ENST00000558819 SMARCA4P51532 1647 aa16.54■□□□□ 0.24
IGDCC4-203ENST00000558819 THOC2Q8NI27 1593 aaKnown RBP16.52■□□□□ 0.24
IGDCC4-203ENST00000558819 BAZ1BQ9UIG0 1483 aaKnown RBP16.46■□□□□ 0.23
IGDCC4-203ENST00000558819 TRIM41Q8WV44 630 aa16.43■□□□□ 0.22
IGDCC4-203ENST00000558819 KIF21AQ7Z4S6 1674 aa16.41■□□□□ 0.22
IGDCC4-203ENST00000558819 LAMC3Q9Y6N6 1575 aa16.4■□□□□ 0.22
IGDCC4-203ENST00000558819 BAZ1AQ9NRL2 1556 aaPredicted RBP16.38■□□□□ 0.21
IGDCC4-203ENST00000558819 PEG3Q9GZU2 1588 aa16.34■□□□□ 0.21
IGDCC4-203ENST00000558819 PDS5BQ9NTI5 1447 aa16.29■□□□□ 0.2
IGDCC4-203ENST00000558819 MROH2BQ7Z745 1585 aa16.27■□□□□ 0.2
IGDCC4-203ENST00000558819 MRC2Q9UBG0 1479 aa16.22■□□□□ 0.19
IGDCC4-203ENST00000558819 WDR62O43379 1518 aa16.19■□□□□ 0.18
IGDCC4-203ENST00000558819 CADPSQ9ULU8 1353 aa16.18■□□□□ 0.18
IGDCC4-203ENST00000558819 CEP164Q9UPV0 1460 aa16.09■□□□□ 0.17
IGDCC4-203ENST00000558819 WIZO95785 1651 aa16.08■□□□□ 0.16
IGDCC4-203ENST00000558819 FANCD2Q9BXW9 1451 aa16.03■□□□□ 0.16
IGDCC4-203ENST00000558819 OSCARQ8IYS5 282 aa16.01■□□□□ 0.15
IGDCC4-203ENST00000558819 URB2Q14146 1524 aaKnown RBP15.94■□□□□ 0.14
IGDCC4-203ENST00000558819 CFTRP13569 1480 aa15.93■□□□□ 0.14
IGDCC4-203ENST00000558819 RIMBP3CA6NJZ7 1639 aa15.92■□□□□ 0.14
IGDCC4-203ENST00000558819 RIMBP3BA6NNM3 1639 aa15.92■□□□□ 0.14
IGDCC4-203ENST00000558819 RIMBP3Q9UFD9 1639 aa15.92■□□□□ 0.14
IGDCC4-203ENST00000558819 ARHGEF11O15085 1522 aa15.82■□□□□ 0.12
IGDCC4-203ENST00000558819 TOP2AP11388 1531 aaKnown RBP15.82■□□□□ 0.12
IGDCC4-203ENST00000558819 ZNF608Q9ULD9 1512 aaPredicted RBP15.81■□□□□ 0.12
IGDCC4-203ENST00000558819 PRDM2Q13029 1718 aa15.78■□□□□ 0.12
IGDCC4-203ENST00000558819 RSF1Q96T23 1441 aaPredicted RBP15.77■□□□□ 0.12
IGDCC4-203ENST00000558819 IFT140Q96RY7 1462 aa15.75■□□□□ 0.11
IGDCC4-203ENST00000558819 EIF4G3O43432 1585 aaKnown RBP15.71■□□□□ 0.11
IGDCC4-203ENST00000558819 CYB5RLQ6IPT4 315 aa15.71■□□□□ 0.11
IGDCC4-203ENST00000558819 TOPBP1Q92547 1522 aa15.69■□□□□ 0.1
IGDCC4-203ENST00000558819 TRHP20396 242 aaPredicted RBP15.67■□□□□ 0.1
IGDCC4-203ENST00000558819 CHD1O14646 1710 aa15.67■□□□□ 0.1
IGDCC4-203ENST00000558819 ARAP1Q96P48 1450 aa15.65■□□□□ 0.1
IGDCC4-203ENST00000558819 CCDC88BA6NC98 1476 aa15.64■□□□□ 0.09
IGDCC4-203ENST00000558819 AQRO60306 1485 aaKnown RBP eCLIP15.61■□□□□ 0.09
IGDCC4-203ENST00000558819 DNMBPQ6XZF7 1577 aa15.6■□□□□ 0.09
IGDCC4-203ENST00000558819 TARBP1Q13395 1621 aaKnown RBP15.58■□□□□ 0.09
IGDCC4-203ENST00000558819 FBLN2P98095 1184 aa15.58■□□□□ 0.08
IGDCC4-203ENST00000558819 ABCC8Q09428 1581 aa15.57■□□□□ 0.08
IGDCC4-203ENST00000558819 POLA1P09884 1462 aaPredicted RBP15.52■□□□□ 0.07
IGDCC4-203ENST00000558819 RAD54L2Q9Y4B4 1467 aa15.48■□□□□ 0.07
IGDCC4-203ENST00000558819 AEBP2Q6ZN18 517 aaPredicted RBP15.46■□□□□ 0.07
IGDCC4-203ENST00000558819 TDRD9Q8NDG6 1382 aaKnown RBP15.46■□□□□ 0.07
IGDCC4-203ENST00000558819 SNAPC4Q5SXM2 1469 aa15.46■□□□□ 0.06
IGDCC4-203ENST00000558819 CLASP1Q7Z460 1538 aa15.45■□□□□ 0.06
IGDCC4-203ENST00000558819 SOGA1O94964 1423 aa15.42■□□□□ 0.06
IGDCC4-203ENST00000558819 SYNJ1O43426 1573 aa15.4■□□□□ 0.06
IGDCC4-203ENST00000558819 FGD5Q6ZNL6 1462 aa15.38■□□□□ 0.05
IGDCC4-203ENST00000558819 CHMP7Q8WUX9 453 aaPredicted RBP15.37■□□□□ 0.05
IGDCC4-203ENST00000558819 MAGI1Q96QZ7 1491 aaPredicted RBP15.35■□□□□ 0.05
IGDCC4-203ENST00000558819 WDR97A6NE52 1622 aa15.35■□□□□ 0.05
IGDCC4-203ENST00000558819 SYNJ2O15056 1496 aa15.32■□□□□ 0.04
IGDCC4-203ENST00000558819 GRIN2BQ13224 1484 aa15.32■□□□□ 0.04
IGDCC4-203ENST00000558819 GAPVD1Q14C86 1478 aa15.31■□□□□ 0.04
IGDCC4-203ENST00000558819 CUX1P39880 1505 aa15.31■□□□□ 0.04
IGDCC4-203ENST00000558819 PBRM1Q86U86 1689 aa15.29■□□□□ 0.04
IGDCC4-203ENST00000558819 ERCC6L2Q5T890 1561 aa15.23■□□□□ 0.03
IGDCC4-203ENST00000558819 ABCA5Q8WWZ7 1642 aa15.19■□□□□ 0.02
IGDCC4-203ENST00000558819 GRIN2AQ12879 1464 aa15.14■□□□□ 0.01
IGDCC4-203ENST00000558819 ABCA10Q8WWZ4 1543 aa15.14■□□□□ 0.01
IGDCC4-203ENST00000558819 CEP170Q5SW79 1584 aa15.14■□□□□ 0.01
IGDCC4-203ENST00000558819 ADAMTS12P58397 1594 aa15.11■□□□□ 0.01
IGDCC4-203ENST00000558819 KIF13AQ9H1H9 1805 aa15.1■□□□□ 0.01
IGDCC4-203ENST00000558819 NUP160Q12769 1436 aa15.09■□□□□ 0.01
IGDCC4-203ENST00000558819 SHROOM2Q13796 1616 aa15.07■□□□□ 0
IGDCC4-203ENST00000558819 WRNQ14191 1432 aaPredicted RBP eCLIP15.01□□□□□ -0.01
IGDCC4-203ENST00000558819 FHAD1B1AJZ9 1412 aa15□□□□□ -0.01
IGDCC4-203ENST00000558819 PRG4Q92954 1404 aaPredicted RBP14.99□□□□□ -0.01
IGDCC4-203ENST00000558819 BIVM-ERCC5R4GMW8 1640 aa14.95□□□□□ -0.02
IGDCC4-203ENST00000558819 FAM69CQ0P6D2 419 aa14.95□□□□□ -0.02
IGDCC4-203ENST00000558819 TOP2BQ02880 1626 aa14.95□□□□□ -0.02
IGDCC4-203ENST00000558819 ERICH3Q5RHP9 1530 aa14.94□□□□□ -0.02
IGDCC4-203ENST00000558819 ABCC10Q5T3U5 1492 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms