RNA–Protein interactions for RNA: ENST00000558795.1

CPNE6-208, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 1,226 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-208ENST00000558795 NISCHQ9Y2I1 1504 aa38.71■■■■□ 3.79
CPNE6-208ENST00000558795 ABCC9O60706 1549 aa35.15■■■■□ 3.22
CPNE6-208ENST00000558795 CCDC180Q9P1Z9 1646 aa34.89■■■■□ 3.18
CPNE6-208ENST00000558795 RB1CC1Q8TDY2 1594 aa33.36■■■□□ 2.93
CPNE6-208ENST00000558795 DNAJC5BQ9UF47 199 aa33.15■■■□□ 2.9
CPNE6-208ENST00000558795 NACADO15069 1562 aa33.04■■■□□ 2.88
CPNE6-208ENST00000558795 DCAF8L2P0C7V8 631 aa32.85■■■□□ 2.85
CPNE6-208ENST00000558795 PABPN1Q86U42 306 aaKnown RBP eCLIP32.67■■■□□ 2.82
CPNE6-208ENST00000558795 UNC13AQ9UPW8 1703 aa32.58■■■□□ 2.81
CPNE6-208ENST00000558795 MYO15BQ96JP2 1530 aa32.46■■■□□ 2.79
CPNE6-208ENST00000558795 BICRAQ9NZM4 1560 aa32.34■■■□□ 2.77
CPNE6-208ENST00000558795 ZCCHC6Q5VYS8 1495 aaKnown RBP32.02■■■□□ 2.72
CPNE6-208ENST00000558795 DCAF1Q9Y4B6 1507 aa31.95■■■□□ 2.71
CPNE6-208ENST00000558795 SHROOM4Q9ULL8 1493 aa31.91■■■□□ 2.7
CPNE6-208ENST00000558795 SCRIBQ14160 1630 aa31.78■■■□□ 2.68
CPNE6-208ENST00000558795 CC2D2AQ9P2K1 1620 aa31.74■■■□□ 2.67
CPNE6-208ENST00000558795 CECR2Q9BXF3 1484 aa31.7■■■□□ 2.66
CPNE6-208ENST00000558795 EIF4G1Q04637 1599 aaKnown RBP31.6■■■□□ 2.65
CPNE6-208ENST00000558795 DNAJC5Q9H3Z4 198 aa30.68■■■□□ 2.5
CPNE6-208ENST00000558795 NCAPD3P42695 1498 aa30.48■■■□□ 2.47
CPNE6-208ENST00000558795 CUX2O14529 1486 aa30.42■■■□□ 2.46
CPNE6-208ENST00000558795 ERCC6Q03468 1493 aa30.41■■■□□ 2.46
CPNE6-208ENST00000558795 ATAD2BQ9ULI0 1458 aa30.36■■■□□ 2.45
CPNE6-208ENST00000558795 SMARCA2P51531 1590 aa30.29■■■□□ 2.44
CPNE6-208ENST00000558795 SMARCA4P51532 1647 aa30.27■■■□□ 2.44
CPNE6-208ENST00000558795 HMGXB3Q12766 1538 aa30.26■■■□□ 2.43
CPNE6-208ENST00000558795 BAZ1AQ9NRL2 1556 aaPredicted RBP30.1■■■□□ 2.41
CPNE6-208ENST00000558795 NESP48681 1621 aa30.1■■■□□ 2.41
CPNE6-208ENST00000558795 BAZ1BQ9UIG0 1483 aaKnown RBP30.08■■■□□ 2.41
CPNE6-208ENST00000558795 PEG3Q9GZU2 1588 aa29.95■■■□□ 2.39
CPNE6-208ENST00000558795 LAMC3Q9Y6N6 1575 aa29.87■■■□□ 2.37
CPNE6-208ENST00000558795 THOC2Q8NI27 1593 aaKnown RBP29.86■■■□□ 2.37
CPNE6-208ENST00000558795 MROH2BQ7Z745 1585 aa29.81■■■□□ 2.36
CPNE6-208ENST00000558795 KIF21AQ7Z4S6 1674 aa29.73■■■□□ 2.35
CPNE6-208ENST00000558795 PDS5BQ9NTI5 1447 aa29.71■■■□□ 2.35
CPNE6-208ENST00000558795 CADPSQ9ULU8 1353 aa29.55■■■□□ 2.32
CPNE6-208ENST00000558795 MRC2Q9UBG0 1479 aa29.47■■■□□ 2.31
CPNE6-208ENST00000558795 WIZO95785 1651 aa29.47■■■□□ 2.31
CPNE6-208ENST00000558795 WDR62O43379 1518 aa29.4■■■□□ 2.3
CPNE6-208ENST00000558795 CEP164Q9UPV0 1460 aa29.31■■■□□ 2.28
CPNE6-208ENST00000558795 TRIM41Q8WV44 630 aa29.28■■■□□ 2.28
CPNE6-208ENST00000558795 FANCD2Q9BXW9 1451 aa29.23■■■□□ 2.27
CPNE6-208ENST00000558795 CFTRP13569 1480 aa29.16■■■□□ 2.26
CPNE6-208ENST00000558795 RSF1Q96T23 1441 aaPredicted RBP29.09■■■□□ 2.25
CPNE6-208ENST00000558795 TOP2AP11388 1531 aaKnown RBP29.08■■■□□ 2.25
CPNE6-208ENST00000558795 URB2Q14146 1524 aaKnown RBP28.99■■■□□ 2.23
CPNE6-208ENST00000558795 OSCARQ8IYS5 282 aa28.98■■■□□ 2.23
CPNE6-208ENST00000558795 PRDM2Q13029 1718 aa28.89■■■□□ 2.22
CPNE6-208ENST00000558795 CCDC88BA6NC98 1476 aa28.73■■■□□ 2.19
CPNE6-208ENST00000558795 IFT140Q96RY7 1462 aa28.72■■■□□ 2.19
CPNE6-208ENST00000558795 ZNF608Q9ULD9 1512 aaPredicted RBP28.68■■■□□ 2.18
CPNE6-208ENST00000558795 TOPBP1Q92547 1522 aa28.64■■■□□ 2.18
CPNE6-208ENST00000558795 RIMBP3CA6NJZ7 1639 aa28.64■■■□□ 2.18
CPNE6-208ENST00000558795 RIMBP3BA6NNM3 1639 aa28.64■■■□□ 2.18
CPNE6-208ENST00000558795 RIMBP3Q9UFD9 1639 aa28.64■■■□□ 2.18
CPNE6-208ENST00000558795 ABCC8Q09428 1581 aa28.58■■■□□ 2.17
CPNE6-208ENST00000558795 EIF4G3O43432 1585 aaKnown RBP28.54■■■□□ 2.16
CPNE6-208ENST00000558795 DNMBPQ6XZF7 1577 aa28.53■■■□□ 2.16
CPNE6-208ENST00000558795 ARHGEF11O15085 1522 aa28.52■■■□□ 2.16
CPNE6-208ENST00000558795 TARBP1Q13395 1621 aaKnown RBP28.4■■■□□ 2.14
CPNE6-208ENST00000558795 CHD1O14646 1710 aa28.39■■■□□ 2.14
CPNE6-208ENST00000558795 AQRO60306 1485 aaKnown RBP eCLIP28.39■■■□□ 2.13
CPNE6-208ENST00000558795 POLA1P09884 1462 aaPredicted RBP28.34■■■□□ 2.13
CPNE6-208ENST00000558795 CYB5RLQ6IPT4 315 aa28.33■■■□□ 2.13
CPNE6-208ENST00000558795 FBLN2P98095 1184 aa28.31■■■□□ 2.12
CPNE6-208ENST00000558795 RAD54L2Q9Y4B4 1467 aa28.22■■■□□ 2.11
CPNE6-208ENST00000558795 SOGA1O94964 1423 aa28.2■■■□□ 2.11
CPNE6-208ENST00000558795 ARAP1Q96P48 1450 aa28.2■■■□□ 2.1
CPNE6-208ENST00000558795 TDRD9Q8NDG6 1382 aaKnown RBP28.18■■■□□ 2.1
CPNE6-208ENST00000558795 TRHP20396 242 aaPredicted RBP28.14■■■□□ 2.1
CPNE6-208ENST00000558795 WDR97A6NE52 1622 aa28.12■■■□□ 2.09
CPNE6-208ENST00000558795 FGD5Q6ZNL6 1462 aa28.12■■■□□ 2.09
CPNE6-208ENST00000558795 SNAPC4Q5SXM2 1469 aa28.11■■■□□ 2.09
CPNE6-208ENST00000558795 CUX1P39880 1505 aa28.04■■■□□ 2.08
CPNE6-208ENST00000558795 CHMP7Q8WUX9 453 aaPredicted RBP28.04■■■□□ 2.08
CPNE6-208ENST00000558795 SYNJ1O43426 1573 aa28.03■■■□□ 2.08
CPNE6-208ENST00000558795 CLASP1Q7Z460 1538 aa28.02■■■□□ 2.08
CPNE6-208ENST00000558795 MAGI1Q96QZ7 1491 aaPredicted RBP28.02■■■□□ 2.08
CPNE6-208ENST00000558795 GRIN2BQ13224 1484 aa28.01■■■□□ 2.07
CPNE6-208ENST00000558795 SYNJ2O15056 1496 aa27.94■■■□□ 2.06
CPNE6-208ENST00000558795 PBRM1Q86U86 1689 aa27.89■■■□□ 2.06
CPNE6-208ENST00000558795 GAPVD1Q14C86 1478 aa27.87■■■□□ 2.05
CPNE6-208ENST00000558795 ABCA10Q8WWZ4 1543 aa27.77■■■□□ 2.04
CPNE6-208ENST00000558795 ABCA5Q8WWZ7 1642 aa27.77■■■□□ 2.04
CPNE6-208ENST00000558795 SUPT5HO00267 1087 aaKnown RBP27.65■■■□□ 2.02
CPNE6-208ENST00000558795 GRIN2AQ12879 1464 aa27.64■■■□□ 2.01
CPNE6-208ENST00000558795 WRNQ14191 1432 aaPredicted RBP eCLIP27.63■■■□□ 2.01
CPNE6-208ENST00000558795 ADAMTS12P58397 1594 aa27.59■■■□□ 2.01
CPNE6-208ENST00000558795 ERCC6L2Q5T890 1561 aa27.56■■■□□ 2
CPNE6-208ENST00000558795 AEBP2Q6ZN18 517 aaPredicted RBP27.55■■■□□ 2
CPNE6-208ENST00000558795 CEP170Q5SW79 1584 aa27.54■■■□□ 2
CPNE6-208ENST00000558795 TOP2BQ02880 1626 aa27.53■■■□□ 2
CPNE6-208ENST00000558795 BIVM-ERCC5R4GMW8 1640 aa27.53■■■□□ 2
CPNE6-208ENST00000558795 NUP160Q12769 1436 aa27.53■■■□□ 2
CPNE6-208ENST00000558795 FHAD1B1AJZ9 1412 aa27.5■■□□□ 1.99
CPNE6-208ENST00000558795 SHROOM2Q13796 1616 aa27.45■■□□□ 1.99
CPNE6-208ENST00000558795 ERICH3Q5RHP9 1530 aa27.44■■□□□ 1.98
CPNE6-208ENST00000558795 PRG4Q92954 1404 aaPredicted RBP27.32■■□□□ 1.96
CPNE6-208ENST00000558795 JPH4Q96JJ6 628 aa27.26■■□□□ 1.95
CPNE6-208ENST00000558795 KIF13AQ9H1H9 1805 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms