RNA–Protein interactions for RNA: ENST00000558721.5

GCNT3-202, Transcript of glucosaminyl (N-acetyl) transferase 3, mucin type, humanhuman

TSL 4

Gene GCNT3, Length 549 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT3-202ENST00000558721 NISCHQ9Y2I1 1504 aa11.07□□□□□ -0.64
GCNT3-202ENST00000558721 AEBP2Q6ZN18 517 aaPredicted RBP10.85□□□□□ -0.67
GCNT3-202ENST00000558721 CHIC1Q5VXU3 224 aa10.72□□□□□ -0.69
GCNT3-202ENST00000558721 ABCC9O60706 1549 aa10.6□□□□□ -0.71
GCNT3-202ENST00000558721 DNAJC5BQ9UF47 199 aa10.27□□□□□ -0.77
GCNT3-202ENST00000558721 CCDC180Q9P1Z9 1646 aa10.21□□□□□ -0.78
GCNT3-202ENST00000558721 RB1CC1Q8TDY2 1594 aa9.89□□□□□ -0.83
GCNT3-202ENST00000558721 UNC13AQ9UPW8 1703 aa9.81□□□□□ -0.84
GCNT3-202ENST00000558721 PABPN1Q86U42 306 aaKnown RBP eCLIP9.76□□□□□ -0.85
GCNT3-202ENST00000558721 DNAJC5Q9H3Z4 198 aa9.73□□□□□ -0.85
GCNT3-202ENST00000558721 NACADO15069 1562 aa9.68□□□□□ -0.86
GCNT3-202ENST00000558721 BICRAQ9NZM4 1560 aa9.63□□□□□ -0.87
GCNT3-202ENST00000558721 CC2D2AQ9P2K1 1620 aa9.58□□□□□ -0.88
GCNT3-202ENST00000558721 CECR2Q9BXF3 1484 aa9.57□□□□□ -0.88
GCNT3-202ENST00000558721 DCAF8L2P0C7V8 631 aa9.56□□□□□ -0.88
GCNT3-202ENST00000558721 SENP3Q9H4L4 574 aaPredicted RBP9.43□□□□□ -0.9
GCNT3-202ENST00000558721 EIF4G1Q04637 1599 aaKnown RBP9.42□□□□□ -0.9
GCNT3-202ENST00000558721 SHROOM4Q9ULL8 1493 aa9.37□□□□□ -0.91
GCNT3-202ENST00000558721 MYO15BQ96JP2 1530 aa9.34□□□□□ -0.91
GCNT3-202ENST00000558721 PHF23Q9BUL5 403 aaPredicted RBP9.3□□□□□ -0.92
GCNT3-202ENST00000558721 SCRIBQ14160 1630 aa9.29□□□□□ -0.92
GCNT3-202ENST00000558721 CUX2O14529 1486 aa9.28□□□□□ -0.92
GCNT3-202ENST00000558721 TRIM41Q8WV44 630 aa9.2□□□□□ -0.94
GCNT3-202ENST00000558721 ERCC6Q03468 1493 aa9.18□□□□□ -0.94
GCNT3-202ENST00000558721 ZCCHC6Q5VYS8 1495 aaKnown RBP9.08□□□□□ -0.96
GCNT3-202ENST00000558721 DCAF1Q9Y4B6 1507 aa9.08□□□□□ -0.96
GCNT3-202ENST00000558721 THOC2Q8NI27 1593 aaKnown RBP9.01□□□□□ -0.97
GCNT3-202ENST00000558721 NESP48681 1621 aa8.98□□□□□ -0.97
GCNT3-202ENST00000558721 KIF21AQ7Z4S6 1674 aa8.95□□□□□ -0.98
GCNT3-202ENST00000558721 SMARCA2P51531 1590 aa8.94□□□□□ -0.98
GCNT3-202ENST00000558721 NCAPD3P42695 1498 aa8.89□□□□□ -0.99
GCNT3-202ENST00000558721 BAZ1AQ9NRL2 1556 aaPredicted RBP8.89□□□□□ -0.99
GCNT3-202ENST00000558721 HMGXB3Q12766 1538 aa8.85□□□□□ -0.99
GCNT3-202ENST00000558721 LAMC3Q9Y6N6 1575 aa8.84□□□□□ -0.99
GCNT3-202ENST00000558721 ATAD2BQ9ULI0 1458 aa8.83□□□□□ -1
GCNT3-202ENST00000558721 RIMBP3CA6NJZ7 1639 aa8.8□□□□□ -1
GCNT3-202ENST00000558721 RIMBP3BA6NNM3 1639 aa8.8□□□□□ -1
GCNT3-202ENST00000558721 RIMBP3Q9UFD9 1639 aa8.8□□□□□ -1
GCNT3-202ENST00000558721 SMARCA4P51532 1647 aa8.79□□□□□ -1
GCNT3-202ENST00000558721 PLPPR3Q6T4P5 718 aa8.77□□□□□ -1.01
GCNT3-202ENST00000558721 BAZ1BQ9UIG0 1483 aaKnown RBP8.77□□□□□ -1.01
GCNT3-202ENST00000558721 PDS5BQ9NTI5 1447 aa8.75□□□□□ -1.01
GCNT3-202ENST00000558721 OSCARQ8IYS5 282 aa8.74□□□□□ -1.01
GCNT3-202ENST00000558721 MRC2Q9UBG0 1479 aa8.74□□□□□ -1.01
GCNT3-202ENST00000558721 WDR62O43379 1518 aa8.74□□□□□ -1.01
GCNT3-202ENST00000558721 ARHGEF11O15085 1522 aa8.67□□□□□ -1.02
GCNT3-202ENST00000558721 TRHP20396 242 aaPredicted RBP8.67□□□□□ -1.02
GCNT3-202ENST00000558721 PEG3Q9GZU2 1588 aa8.65□□□□□ -1.03
GCNT3-202ENST00000558721 CEP164Q9UPV0 1460 aa8.63□□□□□ -1.03
GCNT3-202ENST00000558721 FOXD1Q16676 465 aa8.61□□□□□ -1.03
GCNT3-202ENST00000558721 CADPSQ9ULU8 1353 aa8.61□□□□□ -1.03
GCNT3-202ENST00000558721 CYB5RLQ6IPT4 315 aa8.6□□□□□ -1.03
GCNT3-202ENST00000558721 CHD1O14646 1710 aa8.57□□□□□ -1.04
GCNT3-202ENST00000558721 FANCD2Q9BXW9 1451 aa8.56□□□□□ -1.04
GCNT3-202ENST00000558721 ARAP1Q96P48 1450 aa8.55□□□□□ -1.04
GCNT3-202ENST00000558721 MROH2BQ7Z745 1585 aa8.55□□□□□ -1.04
GCNT3-202ENST00000558721 URB2Q14146 1524 aaKnown RBP8.53□□□□□ -1.04
GCNT3-202ENST00000558721 PRDM2Q13029 1718 aa8.5□□□□□ -1.05
GCNT3-202ENST00000558721 ZNF608Q9ULD9 1512 aaPredicted RBP8.49□□□□□ -1.05
GCNT3-202ENST00000558721 WIZO95785 1651 aa8.49□□□□□ -1.05
GCNT3-202ENST00000558721 EIF4G3O43432 1585 aaKnown RBP8.48□□□□□ -1.05
GCNT3-202ENST00000558721 ILDR1Q86SU0 546 aaPredicted RBP8.44□□□□□ -1.06
GCNT3-202ENST00000558721 RSF1Q96T23 1441 aaPredicted RBP8.43□□□□□ -1.06
GCNT3-202ENST00000558721 CFTRP13569 1480 aa8.43□□□□□ -1.06
GCNT3-202ENST00000558721 IFT140Q96RY7 1462 aa8.43□□□□□ -1.06
GCNT3-202ENST00000558721 FBLN2P98095 1184 aa8.39□□□□□ -1.07
GCNT3-202ENST00000558721 TARBP1Q13395 1621 aaKnown RBP8.36□□□□□ -1.07
GCNT3-202ENST00000558721 CLASP1Q7Z460 1538 aa8.35□□□□□ -1.07
GCNT3-202ENST00000558721 TOPBP1Q92547 1522 aa8.35□□□□□ -1.07
GCNT3-202ENST00000558721 AQRO60306 1485 aaKnown RBP eCLIP8.35□□□□□ -1.07
GCNT3-202ENST00000558721 KIF13AQ9H1H9 1805 aa8.33□□□□□ -1.08
GCNT3-202ENST00000558721 SYNJ1O43426 1573 aa8.31□□□□□ -1.08
GCNT3-202ENST00000558721 DNMBPQ6XZF7 1577 aa8.31□□□□□ -1.08
GCNT3-202ENST00000558721 TOP2AP11388 1531 aaKnown RBP8.29□□□□□ -1.08
GCNT3-202ENST00000558721 GAPVD1Q14C86 1478 aa8.28□□□□□ -1.08
GCNT3-202ENST00000558721 ABCC8Q09428 1581 aa8.27□□□□□ -1.09
GCNT3-202ENST00000558721 SNAPC4Q5SXM2 1469 aa8.27□□□□□ -1.09
GCNT3-202ENST00000558721 POLA1P09884 1462 aaPredicted RBP8.24□□□□□ -1.09
GCNT3-202ENST00000558721 PBRM1Q86U86 1689 aa8.24□□□□□ -1.09
GCNT3-202ENST00000558721 ERCC6L2Q5T890 1561 aa8.22□□□□□ -1.09
GCNT3-202ENST00000558721 RAD54L2Q9Y4B4 1467 aa8.22□□□□□ -1.09
GCNT3-202ENST00000558721 CHMP7Q8WUX9 453 aaPredicted RBP8.22□□□□□ -1.09
GCNT3-202ENST00000558721 TDRD9Q8NDG6 1382 aaKnown RBP8.22□□□□□ -1.09
GCNT3-202ENST00000558721 KDM4FA0A1W2PPD8 638 aa8.21□□□□□ -1.1
GCNT3-202ENST00000558721 ADRA2BP18089 450 aa8.21□□□□□ -1.1
GCNT3-202ENST00000558721 MAGI1Q96QZ7 1491 aaPredicted RBP8.2□□□□□ -1.1
GCNT3-202ENST00000558721 WDR97A6NE52 1622 aa8.2□□□□□ -1.1
GCNT3-202ENST00000558721 TSPOAP1O95153 1857 aa8.19□□□□□ -1.1
GCNT3-202ENST00000558721 KDM6BO15054 1643 aa8.19□□□□□ -1.1
GCNT3-202ENST00000558721 PPP6R1Q9UPN7 881 aa8.19□□□□□ -1.1
GCNT3-202ENST00000558721 SYNJ2O15056 1496 aa8.19□□□□□ -1.1
GCNT3-202ENST00000558721 PIAS4Q8N2W9 510 aaPredicted RBP8.18□□□□□ -1.1
GCNT3-202ENST00000558721 CCDC88BA6NC98 1476 aa8.18□□□□□ -1.1
GCNT3-202ENST00000558721 SOGA1O94964 1423 aa8.17□□□□□ -1.1
GCNT3-202ENST00000558721 HECW2Q9P2P5 1572 aa8.16□□□□□ -1.1
GCNT3-202ENST00000558721 CEP170Q5SW79 1584 aa8.15□□□□□ -1.1
GCNT3-202ENST00000558721 GRIN2BQ13224 1484 aa8.15□□□□□ -1.1
GCNT3-202ENST00000558721 FGD5Q6ZNL6 1462 aa8.14□□□□□ -1.11
GCNT3-202ENST00000558721 MSH5O43196 834 aa8.13□□□□□ -1.11
GCNT3-202ENST00000558721 DIP2BQ9P265 1576 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms