RNA–Protein interactions for RNA: ENST00000558692.5

MIR9-3HG-204, Transcript of MIR9-3 host gene, humanhuman

TSL 4

Gene MIR9-3HG, Length 551 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR9-3HG-204ENST00000558692 NISCHQ9Y2I1 1504 aa14.82□□□□□ -0.04
MIR9-3HG-204ENST00000558692 CCDC180Q9P1Z9 1646 aa13.26□□□□□ -0.29
MIR9-3HG-204ENST00000558692 ABCC9O60706 1549 aa12.98□□□□□ -0.33
MIR9-3HG-204ENST00000558692 RB1CC1Q8TDY2 1594 aa12.56□□□□□ -0.4
MIR9-3HG-204ENST00000558692 NACADO15069 1562 aa12.54□□□□□ -0.4
MIR9-3HG-204ENST00000558692 MYO15BQ96JP2 1530 aa12.49□□□□□ -0.41
MIR9-3HG-204ENST00000558692 DCAF8L2P0C7V8 631 aa12.44□□□□□ -0.42
MIR9-3HG-204ENST00000558692 DCAF1Q9Y4B6 1507 aa12.35□□□□□ -0.43
MIR9-3HG-204ENST00000558692 ZCCHC6Q5VYS8 1495 aaKnown RBP12.31□□□□□ -0.44
MIR9-3HG-204ENST00000558692 SHROOM4Q9ULL8 1493 aa12.15□□□□□ -0.46
MIR9-3HG-204ENST00000558692 PABPN1Q86U42 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
MIR9-3HG-204ENST00000558692 UNC13AQ9UPW8 1703 aa12.08□□□□□ -0.48
MIR9-3HG-204ENST00000558692 BICRAQ9NZM4 1560 aa12.04□□□□□ -0.48
MIR9-3HG-204ENST00000558692 DNAJC5BQ9UF47 199 aa11.96□□□□□ -0.49
MIR9-3HG-204ENST00000558692 SCRIBQ14160 1630 aa11.96□□□□□ -0.5
MIR9-3HG-204ENST00000558692 EIF4G1Q04637 1599 aaKnown RBP11.79□□□□□ -0.52
MIR9-3HG-204ENST00000558692 CC2D2AQ9P2K1 1620 aa11.75□□□□□ -0.53
MIR9-3HG-204ENST00000558692 CECR2Q9BXF3 1484 aa11.74□□□□□ -0.53
MIR9-3HG-204ENST00000558692 NCAPD3P42695 1498 aa11.57□□□□□ -0.56
MIR9-3HG-204ENST00000558692 SMARCA2P51531 1590 aa11.54□□□□□ -0.56
MIR9-3HG-204ENST00000558692 BAZ1AQ9NRL2 1556 aaPredicted RBP11.54□□□□□ -0.56
MIR9-3HG-204ENST00000558692 ATAD2BQ9ULI0 1458 aa11.5□□□□□ -0.57
MIR9-3HG-204ENST00000558692 SMARCA4P51532 1647 aa11.49□□□□□ -0.57
MIR9-3HG-204ENST00000558692 HMGXB3Q12766 1538 aa11.47□□□□□ -0.57
MIR9-3HG-204ENST00000558692 PEG3Q9GZU2 1588 aa11.45□□□□□ -0.58
MIR9-3HG-204ENST00000558692 BAZ1BQ9UIG0 1483 aaKnown RBP11.42□□□□□ -0.58
MIR9-3HG-204ENST00000558692 MROH2BQ7Z745 1585 aa11.34□□□□□ -0.59
MIR9-3HG-204ENST00000558692 ERCC6Q03468 1493 aa11.3□□□□□ -0.6
MIR9-3HG-204ENST00000558692 LAMC3Q9Y6N6 1575 aa11.26□□□□□ -0.61
MIR9-3HG-204ENST00000558692 PDS5BQ9NTI5 1447 aa11.26□□□□□ -0.61
MIR9-3HG-204ENST00000558692 CUX2O14529 1486 aa11.25□□□□□ -0.61
MIR9-3HG-204ENST00000558692 RSF1Q96T23 1441 aaPredicted RBP11.23□□□□□ -0.61
MIR9-3HG-204ENST00000558692 CADPSQ9ULU8 1353 aa11.22□□□□□ -0.61
MIR9-3HG-204ENST00000558692 WIZO95785 1651 aa11.18□□□□□ -0.62
MIR9-3HG-204ENST00000558692 TOP2AP11388 1531 aaKnown RBP11.16□□□□□ -0.62
MIR9-3HG-204ENST00000558692 NESP48681 1621 aa11.15□□□□□ -0.62
MIR9-3HG-204ENST00000558692 CFTRP13569 1480 aa11.11□□□□□ -0.63
MIR9-3HG-204ENST00000558692 MRC2Q9UBG0 1479 aa11.06□□□□□ -0.64
MIR9-3HG-204ENST00000558692 CEP164Q9UPV0 1460 aa11.06□□□□□ -0.64
MIR9-3HG-204ENST00000558692 THOC2Q8NI27 1593 aaKnown RBP11.04□□□□□ -0.64
MIR9-3HG-204ENST00000558692 FANCD2Q9BXW9 1451 aa11.04□□□□□ -0.64
MIR9-3HG-204ENST00000558692 DNAJC5Q9H3Z4 198 aa11.03□□□□□ -0.64
MIR9-3HG-204ENST00000558692 KIF21AQ7Z4S6 1674 aa11.01□□□□□ -0.65
MIR9-3HG-204ENST00000558692 CCDC88BA6NC98 1476 aa11.01□□□□□ -0.65
MIR9-3HG-204ENST00000558692 WDR62O43379 1518 aa11□□□□□ -0.65
MIR9-3HG-204ENST00000558692 ABCC8Q09428 1581 aa10.99□□□□□ -0.65
MIR9-3HG-204ENST00000558692 PRDM2Q13029 1718 aa10.95□□□□□ -0.66
MIR9-3HG-204ENST00000558692 URB2Q14146 1524 aaKnown RBP10.87□□□□□ -0.67
MIR9-3HG-204ENST00000558692 IFT140Q96RY7 1462 aa10.87□□□□□ -0.67
MIR9-3HG-204ENST00000558692 SUPT5HO00267 1087 aaKnown RBP10.85□□□□□ -0.67
MIR9-3HG-204ENST00000558692 TOPBP1Q92547 1522 aa10.84□□□□□ -0.67
MIR9-3HG-204ENST00000558692 DNMBPQ6XZF7 1577 aa10.82□□□□□ -0.68
MIR9-3HG-204ENST00000558692 OSCARQ8IYS5 282 aa10.81□□□□□ -0.68
MIR9-3HG-204ENST00000558692 WDR97A6NE52 1622 aa10.76□□□□□ -0.69
MIR9-3HG-204ENST00000558692 SOGA1O94964 1423 aa10.74□□□□□ -0.69
MIR9-3HG-204ENST00000558692 POLA1P09884 1462 aaPredicted RBP10.73□□□□□ -0.69
MIR9-3HG-204ENST00000558692 TARBP1Q13395 1621 aaKnown RBP10.69□□□□□ -0.7
MIR9-3HG-204ENST00000558692 ZNF608Q9ULD9 1512 aaPredicted RBP10.68□□□□□ -0.7
MIR9-3HG-204ENST00000558692 FGD5Q6ZNL6 1462 aa10.68□□□□□ -0.7
MIR9-3HG-204ENST00000558692 WRNQ14191 1432 aaPredicted RBP eCLIP10.67□□□□□ -0.7
MIR9-3HG-204ENST00000558692 EIF4G3O43432 1585 aaKnown RBP10.66□□□□□ -0.7
MIR9-3HG-204ENST00000558692 CUX1P39880 1505 aa10.66□□□□□ -0.7
MIR9-3HG-204ENST00000558692 AQRO60306 1485 aaKnown RBP eCLIP10.65□□□□□ -0.7
MIR9-3HG-204ENST00000558692 GRIN2BQ13224 1484 aa10.64□□□□□ -0.71
MIR9-3HG-204ENST00000558692 MAGI1Q96QZ7 1491 aaPredicted RBP10.64□□□□□ -0.71
MIR9-3HG-204ENST00000558692 CHMP7Q8WUX9 453 aaPredicted RBP10.63□□□□□ -0.71
MIR9-3HG-204ENST00000558692 TDRD9Q8NDG6 1382 aaKnown RBP10.63□□□□□ -0.71
MIR9-3HG-204ENST00000558692 ABCA10Q8WWZ4 1543 aa10.63□□□□□ -0.71
MIR9-3HG-204ENST00000558692 RAD54L2Q9Y4B4 1467 aa10.62□□□□□ -0.71
MIR9-3HG-204ENST00000558692 FBLN2P98095 1184 aa10.61□□□□□ -0.71
MIR9-3HG-204ENST00000558692 GAPVD1Q14C86 1478 aa10.6□□□□□ -0.71
MIR9-3HG-204ENST00000558692 TOP2BQ02880 1626 aa10.59□□□□□ -0.71
MIR9-3HG-204ENST00000558692 SYNJ2O15056 1496 aa10.58□□□□□ -0.72
MIR9-3HG-204ENST00000558692 BIVM-ERCC5R4GMW8 1640 aa10.57□□□□□ -0.72
MIR9-3HG-204ENST00000558692 SNAPC4Q5SXM2 1469 aa10.55□□□□□ -0.72
MIR9-3HG-204ENST00000558692 SYNJ1O43426 1573 aa10.55□□□□□ -0.72
MIR9-3HG-204ENST00000558692 TRIM41Q8WV44 630 aa10.53□□□□□ -0.72
MIR9-3HG-204ENST00000558692 ABCA5Q8WWZ7 1642 aa10.52□□□□□ -0.73
MIR9-3HG-204ENST00000558692 ERICH3Q5RHP9 1530 aa10.52□□□□□ -0.73
MIR9-3HG-204ENST00000558692 CHD1O14646 1710 aa10.51□□□□□ -0.73
MIR9-3HG-204ENST00000558692 FHAD1B1AJZ9 1412 aa10.5□□□□□ -0.73
MIR9-3HG-204ENST00000558692 ARHGEF11O15085 1522 aa10.5□□□□□ -0.73
MIR9-3HG-204ENST00000558692 PBRM1Q86U86 1689 aa10.49□□□□□ -0.73
MIR9-3HG-204ENST00000558692 KIF27Q86VH2 1401 aa10.48□□□□□ -0.73
MIR9-3HG-204ENST00000558692 RIMBP3CA6NJZ7 1639 aa10.47□□□□□ -0.73
MIR9-3HG-204ENST00000558692 RIMBP3BA6NNM3 1639 aa10.47□□□□□ -0.73
MIR9-3HG-204ENST00000558692 RIMBP3Q9UFD9 1639 aa10.47□□□□□ -0.73
MIR9-3HG-204ENST00000558692 CYB5RLQ6IPT4 315 aa10.46□□□□□ -0.73
MIR9-3HG-204ENST00000558692 GRIN2AQ12879 1464 aa10.46□□□□□ -0.74
MIR9-3HG-204ENST00000558692 CLASP1Q7Z460 1538 aa10.45□□□□□ -0.74
MIR9-3HG-204ENST00000558692 ADAMTS12P58397 1594 aa10.43□□□□□ -0.74
MIR9-3HG-204ENST00000558692 NUP160Q12769 1436 aa10.42□□□□□ -0.74
MIR9-3HG-204ENST00000558692 IGF1RP08069 1367 aa10.39□□□□□ -0.75
MIR9-3HG-204ENST00000558692 CUL7Q14999 1698 aa10.38□□□□□ -0.75
MIR9-3HG-204ENST00000558692 ARAP1Q96P48 1450 aa10.38□□□□□ -0.75
MIR9-3HG-204ENST00000558692 JPH4Q96JJ6 628 aa10.38□□□□□ -0.75
MIR9-3HG-204ENST00000558692 CARMIL1Q5VZK9 1371 aa10.35□□□□□ -0.75
MIR9-3HG-204ENST00000558692 KIAA0586Q9BVV6 1533 aa10.34□□□□□ -0.75
MIR9-3HG-204ENST00000558692 CEP170Q5SW79 1584 aa10.33□□□□□ -0.76
MIR9-3HG-204ENST00000558692 SHROOM2Q13796 1616 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms