RNA–Protein interactions for RNA: ENST00000558619.5

CRTC3-206, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 593 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-206ENST00000558619 NISCHQ9Y2I1 1504 aa43.04■■■■■ 4.48
CRTC3-206ENST00000558619 CCDC180Q9P1Z9 1646 aa38.7■■■■□ 3.79
CRTC3-206ENST00000558619 ABCC9O60706 1549 aa38.53■■■■□ 3.76
CRTC3-206ENST00000558619 RB1CC1Q8TDY2 1594 aa36.76■■■■□ 3.48
CRTC3-206ENST00000558619 NACADO15069 1562 aa36.49■■■■□ 3.43
CRTC3-206ENST00000558619 DCAF8L2P0C7V8 631 aa36.25■■■■□ 3.39
CRTC3-206ENST00000558619 UNC13AQ9UPW8 1703 aa35.99■■■■□ 3.35
CRTC3-206ENST00000558619 MYO15BQ96JP2 1530 aa35.98■■■■□ 3.35
CRTC3-206ENST00000558619 DNAJC5BQ9UF47 199 aa35.94■■■■□ 3.34
CRTC3-206ENST00000558619 PABPN1Q86U42 306 aaKnown RBP eCLIP35.81■■■■□ 3.32
CRTC3-206ENST00000558619 ZCCHC6Q5VYS8 1495 aaKnown RBP35.71■■■■□ 3.31
CRTC3-206ENST00000558619 BICRAQ9NZM4 1560 aa35.64■■■■□ 3.3
CRTC3-206ENST00000558619 DCAF1Q9Y4B6 1507 aa35.57■■■■□ 3.28
CRTC3-206ENST00000558619 SCRIBQ14160 1630 aa35.24■■■■□ 3.23
CRTC3-206ENST00000558619 SHROOM4Q9ULL8 1493 aa35.2■■■■□ 3.23
CRTC3-206ENST00000558619 CC2D2AQ9P2K1 1620 aa34.84■■■■□ 3.17
CRTC3-206ENST00000558619 EIF4G1Q04637 1599 aaKnown RBP34.79■■■■□ 3.16
CRTC3-206ENST00000558619 CECR2Q9BXF3 1484 aa34.7■■■■□ 3.15
CRTC3-206ENST00000558619 NCAPD3P42695 1498 aa33.63■■■□□ 2.97
CRTC3-206ENST00000558619 SMARCA4P51532 1647 aa33.61■■■□□ 2.97
CRTC3-206ENST00000558619 DNAJC5Q9H3Z4 198 aa33.57■■■□□ 2.96
CRTC3-206ENST00000558619 ATAD2BQ9ULI0 1458 aa33.56■■■□□ 2.96
CRTC3-206ENST00000558619 SMARCA2P51531 1590 aa33.52■■■□□ 2.96
CRTC3-206ENST00000558619 HMGXB3Q12766 1538 aa33.47■■■□□ 2.95
CRTC3-206ENST00000558619 BAZ1AQ9NRL2 1556 aaPredicted RBP33.45■■■□□ 2.95
CRTC3-206ENST00000558619 ERCC6Q03468 1493 aa33.3■■■□□ 2.92
CRTC3-206ENST00000558619 BAZ1BQ9UIG0 1483 aaKnown RBP33.28■■■□□ 2.92
CRTC3-206ENST00000558619 PEG3Q9GZU2 1588 aa33.26■■■□□ 2.91
CRTC3-206ENST00000558619 CUX2O14529 1486 aa33.19■■■□□ 2.9
CRTC3-206ENST00000558619 MROH2BQ7Z745 1585 aa33.16■■■□□ 2.9
CRTC3-206ENST00000558619 NESP48681 1621 aa33.1■■■□□ 2.89
CRTC3-206ENST00000558619 LAMC3Q9Y6N6 1575 aa32.95■■■□□ 2.86
CRTC3-206ENST00000558619 THOC2Q8NI27 1593 aaKnown RBP32.83■■■□□ 2.85
CRTC3-206ENST00000558619 WIZO95785 1651 aa32.82■■■□□ 2.84
CRTC3-206ENST00000558619 KIF21AQ7Z4S6 1674 aa32.79■■■□□ 2.84
CRTC3-206ENST00000558619 PDS5BQ9NTI5 1447 aa32.7■■■□□ 2.83
CRTC3-206ENST00000558619 CADPSQ9ULU8 1353 aa32.61■■■□□ 2.81
CRTC3-206ENST00000558619 RSF1Q96T23 1441 aaPredicted RBP32.46■■■□□ 2.79
CRTC3-206ENST00000558619 MRC2Q9UBG0 1479 aa32.44■■■□□ 2.78
CRTC3-206ENST00000558619 TOP2AP11388 1531 aaKnown RBP32.41■■■□□ 2.78
CRTC3-206ENST00000558619 WDR62O43379 1518 aa32.37■■■□□ 2.77
CRTC3-206ENST00000558619 CEP164Q9UPV0 1460 aa32.34■■■□□ 2.77
CRTC3-206ENST00000558619 FANCD2Q9BXW9 1451 aa32.29■■■□□ 2.76
CRTC3-206ENST00000558619 CFTRP13569 1480 aa32.27■■■□□ 2.76
CRTC3-206ENST00000558619 PRDM2Q13029 1718 aa32.14■■■□□ 2.74
CRTC3-206ENST00000558619 URB2Q14146 1524 aaKnown RBP32■■■□□ 2.71
CRTC3-206ENST00000558619 CCDC88BA6NC98 1476 aa31.98■■■□□ 2.71
CRTC3-206ENST00000558619 TRIM41Q8WV44 630 aa31.72■■■□□ 2.67
CRTC3-206ENST00000558619 TOPBP1Q92547 1522 aa31.69■■■□□ 2.66
CRTC3-206ENST00000558619 IFT140Q96RY7 1462 aa31.66■■■□□ 2.66
CRTC3-206ENST00000558619 ABCC8Q09428 1581 aa31.63■■■□□ 2.65
CRTC3-206ENST00000558619 DNMBPQ6XZF7 1577 aa31.61■■■□□ 2.65
CRTC3-206ENST00000558619 OSCARQ8IYS5 282 aa31.61■■■□□ 2.65
CRTC3-206ENST00000558619 ZNF608Q9ULD9 1512 aaPredicted RBP31.59■■■□□ 2.65
CRTC3-206ENST00000558619 EIF4G3O43432 1585 aaKnown RBP31.51■■■□□ 2.63
CRTC3-206ENST00000558619 TARBP1Q13395 1621 aaKnown RBP31.42■■■□□ 2.62
CRTC3-206ENST00000558619 POLA1P09884 1462 aaPredicted RBP31.36■■■□□ 2.61
CRTC3-206ENST00000558619 RIMBP3CA6NJZ7 1639 aa31.31■■■□□ 2.6
CRTC3-206ENST00000558619 RIMBP3BA6NNM3 1639 aa31.31■■■□□ 2.6
CRTC3-206ENST00000558619 RIMBP3Q9UFD9 1639 aa31.31■■■□□ 2.6
CRTC3-206ENST00000558619 AQRO60306 1485 aaKnown RBP eCLIP31.3■■■□□ 2.6
CRTC3-206ENST00000558619 CHD1O14646 1710 aa31.29■■■□□ 2.6
CRTC3-206ENST00000558619 RAD54L2Q9Y4B4 1467 aa31.23■■■□□ 2.59
CRTC3-206ENST00000558619 SOGA1O94964 1423 aa31.19■■■□□ 2.58
CRTC3-206ENST00000558619 FGD5Q6ZNL6 1462 aa31.19■■■□□ 2.58
CRTC3-206ENST00000558619 ARHGEF11O15085 1522 aa31.19■■■□□ 2.58
CRTC3-206ENST00000558619 CUX1P39880 1505 aa31.16■■■□□ 2.58
CRTC3-206ENST00000558619 WDR97A6NE52 1622 aa31.15■■■□□ 2.58
CRTC3-206ENST00000558619 TDRD9Q8NDG6 1382 aaKnown RBP31.1■■■□□ 2.57
CRTC3-206ENST00000558619 SUPT5HO00267 1087 aaKnown RBP31.08■■■□□ 2.57
CRTC3-206ENST00000558619 FBLN2P98095 1184 aa31.08■■■□□ 2.57
CRTC3-206ENST00000558619 SNAPC4Q5SXM2 1469 aa31.03■■■□□ 2.56
CRTC3-206ENST00000558619 PBRM1Q86U86 1689 aa30.95■■■□□ 2.55
CRTC3-206ENST00000558619 GRIN2BQ13224 1484 aa30.95■■■□□ 2.54
CRTC3-206ENST00000558619 MAGI1Q96QZ7 1491 aaPredicted RBP30.95■■■□□ 2.54
CRTC3-206ENST00000558619 SYNJ1O43426 1573 aa30.88■■■□□ 2.53
CRTC3-206ENST00000558619 CYB5RLQ6IPT4 315 aa30.87■■■□□ 2.53
CRTC3-206ENST00000558619 CHMP7Q8WUX9 453 aaPredicted RBP30.86■■■□□ 2.53
CRTC3-206ENST00000558619 ARAP1Q96P48 1450 aa30.86■■■□□ 2.53
CRTC3-206ENST00000558619 CLASP1Q7Z460 1538 aa30.86■■■□□ 2.53
CRTC3-206ENST00000558619 SYNJ2O15056 1496 aa30.83■■■□□ 2.53
CRTC3-206ENST00000558619 GAPVD1Q14C86 1478 aa30.83■■■□□ 2.53
CRTC3-206ENST00000558619 ABCA5Q8WWZ7 1642 aa30.83■■■□□ 2.53
CRTC3-206ENST00000558619 ABCA10Q8WWZ4 1543 aa30.83■■■□□ 2.53
CRTC3-206ENST00000558619 BIVM-ERCC5R4GMW8 1640 aa30.76■■■□□ 2.51
CRTC3-206ENST00000558619 TOP2BQ02880 1626 aa30.72■■■□□ 2.51
CRTC3-206ENST00000558619 WRNQ14191 1432 aaPredicted RBP eCLIP30.71■■■□□ 2.51
CRTC3-206ENST00000558619 ADAMTS12P58397 1594 aa30.6■■■□□ 2.49
CRTC3-206ENST00000558619 GRIN2AQ12879 1464 aa30.56■■■□□ 2.48
CRTC3-206ENST00000558619 TRHP20396 242 aaPredicted RBP30.55■■■□□ 2.48
CRTC3-206ENST00000558619 ERICH3Q5RHP9 1530 aa30.47■■■□□ 2.47
CRTC3-206ENST00000558619 CEP170Q5SW79 1584 aa30.46■■■□□ 2.47
CRTC3-206ENST00000558619 FHAD1B1AJZ9 1412 aa30.44■■■□□ 2.46
CRTC3-206ENST00000558619 NUP160Q12769 1436 aa30.41■■■□□ 2.46
CRTC3-206ENST00000558619 ERCC6L2Q5T890 1561 aa30.37■■■□□ 2.45
CRTC3-206ENST00000558619 SHROOM2Q13796 1616 aa30.34■■■□□ 2.45
CRTC3-206ENST00000558619 RUSC2Q8N2Y8 1516 aa30.17■■■□□ 2.42
CRTC3-206ENST00000558619 PRG4Q92954 1404 aaPredicted RBP30.13■■■□□ 2.41
CRTC3-206ENST00000558619 CUL7Q14999 1698 aa30.1■■■□□ 2.41
CRTC3-206ENST00000558619 KIF27Q86VH2 1401 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms