RNA–Protein interactions for RNA: ENST00000558610.5

IVD-210, Transcript of isovaleryl-CoA dehydrogenase, humanhuman

TSL 3

Gene IVD, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IVD-210ENST00000558610 NISCHQ9Y2I1 1504 aa36.64■■■■□ 3.46
IVD-210ENST00000558610 ABCC9O60706 1549 aa33.18■■■□□ 2.9
IVD-210ENST00000558610 CCDC180Q9P1Z9 1646 aa32.77■■■□□ 2.84
IVD-210ENST00000558610 DNAJC5BQ9UF47 199 aa31.42■■■□□ 2.62
IVD-210ENST00000558610 RB1CC1Q8TDY2 1594 aa31.33■■■□□ 2.61
IVD-210ENST00000558610 DCAF8L2P0C7V8 631 aa31.18■■■□□ 2.58
IVD-210ENST00000558610 NACADO15069 1562 aa31.06■■■□□ 2.56
IVD-210ENST00000558610 PABPN1Q86U42 306 aaKnown RBP eCLIP30.98■■■□□ 2.55
IVD-210ENST00000558610 UNC13AQ9UPW8 1703 aa30.68■■■□□ 2.5
IVD-210ENST00000558610 BICRAQ9NZM4 1560 aa30.55■■■□□ 2.48
IVD-210ENST00000558610 MYO15BQ96JP2 1530 aa30.54■■■□□ 2.48
IVD-210ENST00000558610 ZCCHC6Q5VYS8 1495 aaKnown RBP30.31■■■□□ 2.44
IVD-210ENST00000558610 DCAF1Q9Y4B6 1507 aa30.12■■■□□ 2.41
IVD-210ENST00000558610 SCRIBQ14160 1630 aa30.04■■■□□ 2.4
IVD-210ENST00000558610 CC2D2AQ9P2K1 1620 aa29.88■■■□□ 2.37
IVD-210ENST00000558610 SHROOM4Q9ULL8 1493 aa29.87■■■□□ 2.37
IVD-210ENST00000558610 CECR2Q9BXF3 1484 aa29.84■■■□□ 2.37
IVD-210ENST00000558610 EIF4G1Q04637 1599 aaKnown RBP29.76■■■□□ 2.35
IVD-210ENST00000558610 DNAJC5Q9H3Z4 198 aa28.79■■■□□ 2.2
IVD-210ENST00000558610 NCAPD3P42695 1498 aa28.76■■■□□ 2.19
IVD-210ENST00000558610 ATAD2BQ9ULI0 1458 aa28.7■■■□□ 2.18
IVD-210ENST00000558610 SMARCA4P51532 1647 aa28.58■■■□□ 2.17
IVD-210ENST00000558610 ERCC6Q03468 1493 aa28.55■■■□□ 2.16
IVD-210ENST00000558610 NESP48681 1621 aa28.5■■■□□ 2.15
IVD-210ENST00000558610 SMARCA2P51531 1590 aa28.49■■■□□ 2.15
IVD-210ENST00000558610 CUX2O14529 1486 aa28.47■■■□□ 2.15
IVD-210ENST00000558610 HMGXB3Q12766 1538 aa28.45■■■□□ 2.15
IVD-210ENST00000558610 BAZ1BQ9UIG0 1483 aaKnown RBP28.37■■■□□ 2.13
IVD-210ENST00000558610 BAZ1AQ9NRL2 1556 aaPredicted RBP28.37■■■□□ 2.13
IVD-210ENST00000558610 MROH2BQ7Z745 1585 aa28.31■■■□□ 2.12
IVD-210ENST00000558610 PEG3Q9GZU2 1588 aa28.24■■■□□ 2.11
IVD-210ENST00000558610 THOC2Q8NI27 1593 aaKnown RBP28.09■■■□□ 2.09
IVD-210ENST00000558610 LAMC3Q9Y6N6 1575 aa28.06■■■□□ 2.08
IVD-210ENST00000558610 KIF21AQ7Z4S6 1674 aa28■■■□□ 2.07
IVD-210ENST00000558610 PDS5BQ9NTI5 1447 aa27.94■■■□□ 2.06
IVD-210ENST00000558610 WIZO95785 1651 aa27.94■■■□□ 2.06
IVD-210ENST00000558610 CADPSQ9ULU8 1353 aa27.91■■■□□ 2.06
IVD-210ENST00000558610 MRC2Q9UBG0 1479 aa27.73■■■□□ 2.03
IVD-210ENST00000558610 RSF1Q96T23 1441 aaPredicted RBP27.67■■■□□ 2.02
IVD-210ENST00000558610 WDR62O43379 1518 aa27.65■■■□□ 2.02
IVD-210ENST00000558610 FANCD2Q9BXW9 1451 aa27.59■■■□□ 2.01
IVD-210ENST00000558610 CEP164Q9UPV0 1460 aa27.58■■■□□ 2.01
IVD-210ENST00000558610 TRIM41Q8WV44 630 aa27.55■■■□□ 2
IVD-210ENST00000558610 CFTRP13569 1480 aa27.55■■■□□ 2
IVD-210ENST00000558610 TOP2AP11388 1531 aaKnown RBP27.48■■□□□ 1.99
IVD-210ENST00000558610 URB2Q14146 1524 aaKnown RBP27.42■■□□□ 1.98
IVD-210ENST00000558610 CCDC88BA6NC98 1476 aa27.28■■□□□ 1.96
IVD-210ENST00000558610 OSCARQ8IYS5 282 aa27.28■■□□□ 1.96
IVD-210ENST00000558610 ZNF608Q9ULD9 1512 aaPredicted RBP27.16■■□□□ 1.94
IVD-210ENST00000558610 PRDM2Q13029 1718 aa27.1■■□□□ 1.93
IVD-210ENST00000558610 TOPBP1Q92547 1522 aa27.06■■□□□ 1.92
IVD-210ENST00000558610 IFT140Q96RY7 1462 aa27.04■■□□□ 1.92
IVD-210ENST00000558610 RIMBP3CA6NJZ7 1639 aa26.91■■□□□ 1.9
IVD-210ENST00000558610 RIMBP3BA6NNM3 1639 aa26.91■■□□□ 1.9
IVD-210ENST00000558610 RIMBP3Q9UFD9 1639 aa26.91■■□□□ 1.9
IVD-210ENST00000558610 AQRO60306 1485 aaKnown RBP eCLIP26.9■■□□□ 1.99e-6■■□□□ 13.1
IVD-210ENST00000558610 DNMBPQ6XZF7 1577 aa26.88■■□□□ 1.89
IVD-210ENST00000558610 EIF4G3O43432 1585 aaKnown RBP26.87■■□□□ 1.89
IVD-210ENST00000558610 ABCC8Q09428 1581 aa26.85■■□□□ 1.89
IVD-210ENST00000558610 TARBP1Q13395 1621 aaKnown RBP26.82■■□□□ 1.88
IVD-210ENST00000558610 ARHGEF11O15085 1522 aa26.8■■□□□ 1.88
IVD-210ENST00000558610 POLA1P09884 1462 aaPredicted RBP26.79■■□□□ 1.88
IVD-210ENST00000558610 RAD54L2Q9Y4B4 1467 aa26.78■■□□□ 1.88
IVD-210ENST00000558610 FBLN2P98095 1184 aa26.76■■□□□ 1.87
IVD-210ENST00000558610 CYB5RLQ6IPT4 315 aa26.74■■□□□ 1.87
IVD-210ENST00000558610 TDRD9Q8NDG6 1382 aaKnown RBP26.71■■□□□ 1.87
IVD-210ENST00000558610 CHD1O14646 1710 aa26.7■■□□□ 1.86
IVD-210ENST00000558610 SOGA1O94964 1423 aa26.67■■□□□ 1.86
IVD-210ENST00000558610 FGD5Q6ZNL6 1462 aa26.6■■□□□ 1.85
IVD-210ENST00000558610 ARAP1Q96P48 1450 aa26.57■■□□□ 1.84
IVD-210ENST00000558610 CUX1P39880 1505 aa26.57■■□□□ 1.84
IVD-210ENST00000558610 SNAPC4Q5SXM2 1469 aa26.55■■□□□ 1.84
IVD-210ENST00000558610 CHMP7Q8WUX9 453 aaPredicted RBP26.48■■□□□ 1.83
IVD-210ENST00000558610 TRHP20396 242 aaPredicted RBP26.46■■□□□ 1.83
IVD-210ENST00000558610 SUPT5HO00267 1087 aaKnown RBP26.45■■□□□ 1.82
IVD-210ENST00000558610 GRIN2BQ13224 1484 aa26.4■■□□□ 1.82
IVD-210ENST00000558610 CLASP1Q7Z460 1538 aa26.39■■□□□ 1.82
IVD-210ENST00000558610 MAGI1Q96QZ7 1491 aaPredicted RBP26.36■■□□□ 1.81
IVD-210ENST00000558610 WDR97A6NE52 1622 aa26.34■■□□□ 1.81
IVD-210ENST00000558610 SYNJ2O15056 1496 aa26.32■■□□□ 1.8
IVD-210ENST00000558610 GAPVD1Q14C86 1478 aa26.31■■□□□ 1.8
IVD-210ENST00000558610 SYNJ1O43426 1573 aa26.29■■□□□ 1.8
IVD-210ENST00000558610 PBRM1Q86U86 1689 aa26.24■■□□□ 1.79
IVD-210ENST00000558610 ABCA10Q8WWZ4 1543 aa26.24■■□□□ 1.79
IVD-210ENST00000558610 ABCA5Q8WWZ7 1642 aa26.2■■□□□ 1.78
IVD-210ENST00000558610 ERCC6L2Q5T890 1561 aa26.12■■□□□ 1.77
IVD-210ENST00000558610 WRNQ14191 1432 aaPredicted RBP eCLIP26.11■■□□□ 1.77
IVD-210ENST00000558610 GRIN2AQ12879 1464 aa26.07■■□□□ 1.76
IVD-210ENST00000558610 CEP170Q5SW79 1584 aa26.03■■□□□ 1.76
IVD-210ENST00000558610 TOP2BQ02880 1626 aa26.03■■□□□ 1.76
IVD-210ENST00000558610 ADAMTS12P58397 1594 aa26.01■■□□□ 1.75
IVD-210ENST00000558610 BIVM-ERCC5R4GMW8 1640 aa26■■□□□ 1.75
IVD-210ENST00000558610 NUP160Q12769 1436 aa25.99■■□□□ 1.75
IVD-210ENST00000558610 FHAD1B1AJZ9 1412 aa25.96■■□□□ 1.75
IVD-210ENST00000558610 ERICH3Q5RHP9 1530 aa25.86■■□□□ 1.73
IVD-210ENST00000558610 SHROOM2Q13796 1616 aa25.85■■□□□ 1.73
IVD-210ENST00000558610 PRG4Q92954 1404 aaPredicted RBP25.81■■□□□ 1.72
IVD-210ENST00000558610 JPH4Q96JJ6 628 aa25.81■■□□□ 1.72
IVD-210ENST00000558610 AEBP2Q6ZN18 517 aaPredicted RBP25.72■■□□□ 1.71
IVD-210ENST00000558610 RUSC2Q8N2Y8 1516 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms