RNA–Protein interactions for RNA: ENST00000558605.1

IDH3A-209, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 4

Gene IDH3A, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-209ENST00000558605 NISCHQ9Y2I1 1504 aa50.87■■■■■ 5.73
IDH3A-209ENST00000558605 ABCC9O60706 1549 aa46.39■■■■■ 5.02
IDH3A-209ENST00000558605 CCDC180Q9P1Z9 1646 aa45.81■■■■■ 4.92
IDH3A-209ENST00000558605 DNAJC5BQ9UF47 199 aa44.03■■■■■ 4.64
IDH3A-209ENST00000558605 RB1CC1Q8TDY2 1594 aa43.88■■■■■ 4.62
IDH3A-209ENST00000558605 NACADO15069 1562 aa43.46■■■■■ 4.55
IDH3A-209ENST00000558605 DCAF8L2P0C7V8 631 aa43.22■■■■■ 4.51
IDH3A-209ENST00000558605 PABPN1Q86U42 306 aaKnown RBP eCLIP43.15■■■■■ 4.5
IDH3A-209ENST00000558605 UNC13AQ9UPW8 1703 aa42.88■■■■■ 4.46
IDH3A-209ENST00000558605 MYO15BQ96JP2 1530 aa42.68■■■■■ 4.42
IDH3A-209ENST00000558605 BICRAQ9NZM4 1560 aa42.67■■■■■ 4.42
IDH3A-209ENST00000558605 ZCCHC6Q5VYS8 1495 aaKnown RBP42.04■■■■■ 4.32
IDH3A-209ENST00000558605 SHROOM4Q9ULL8 1493 aa41.97■■■■■ 4.31
IDH3A-209ENST00000558605 DCAF1Q9Y4B6 1507 aa41.96■■■■■ 4.31
IDH3A-209ENST00000558605 CC2D2AQ9P2K1 1620 aa41.86■■■■■ 4.29
IDH3A-209ENST00000558605 CECR2Q9BXF3 1484 aa41.83■■■■■ 4.29
IDH3A-209ENST00000558605 SCRIBQ14160 1630 aa41.77■■■■■ 4.28
IDH3A-209ENST00000558605 EIF4G1Q04637 1599 aaKnown RBP41.64■■■■■ 4.26
IDH3A-209ENST00000558605 DNAJC5Q9H3Z4 198 aa40.76■■■■■ 4.12
IDH3A-209ENST00000558605 NCAPD3P42695 1498 aa40.16■■■■■ 4.02
IDH3A-209ENST00000558605 CUX2O14529 1486 aa40.15■■■■■ 4.02
IDH3A-209ENST00000558605 ERCC6Q03468 1493 aa40.06■■■■■ 4
IDH3A-209ENST00000558605 ATAD2BQ9ULI0 1458 aa39.98■■■■□ 3.99
IDH3A-209ENST00000558605 SMARCA2P51531 1590 aa39.79■■■■□ 3.96
IDH3A-209ENST00000558605 SMARCA4P51532 1647 aa39.78■■■■□ 3.96
IDH3A-209ENST00000558605 HMGXB3Q12766 1538 aa39.77■■■■□ 3.96
IDH3A-209ENST00000558605 NESP48681 1621 aa39.73■■■■□ 3.95
IDH3A-209ENST00000558605 BAZ1BQ9UIG0 1483 aaKnown RBP39.54■■■■□ 3.92
IDH3A-209ENST00000558605 BAZ1AQ9NRL2 1556 aaPredicted RBP39.5■■■■□ 3.91
IDH3A-209ENST00000558605 PEG3Q9GZU2 1588 aa39.38■■■■□ 3.9
IDH3A-209ENST00000558605 THOC2Q8NI27 1593 aaKnown RBP39.38■■■■□ 3.89
IDH3A-209ENST00000558605 LAMC3Q9Y6N6 1575 aa39.3■■■■□ 3.88
IDH3A-209ENST00000558605 MROH2BQ7Z745 1585 aa39.22■■■■□ 3.87
IDH3A-209ENST00000558605 KIF21AQ7Z4S6 1674 aa39.13■■■■□ 3.86
IDH3A-209ENST00000558605 PDS5BQ9NTI5 1447 aa39.11■■■■□ 3.85
IDH3A-209ENST00000558605 CADPSQ9ULU8 1353 aa38.93■■■■□ 3.82
IDH3A-209ENST00000558605 MRC2Q9UBG0 1479 aa38.81■■■■□ 3.8
IDH3A-209ENST00000558605 TRIM41Q8WV44 630 aa38.77■■■■□ 3.8
IDH3A-209ENST00000558605 WDR62O43379 1518 aa38.72■■■■□ 3.79
IDH3A-209ENST00000558605 WIZO95785 1651 aa38.71■■■■□ 3.79
IDH3A-209ENST00000558605 CEP164Q9UPV0 1460 aa38.54■■■■□ 3.76
IDH3A-209ENST00000558605 FANCD2Q9BXW9 1451 aa38.47■■■■□ 3.75
IDH3A-209ENST00000558605 CFTRP13569 1480 aa38.36■■■■□ 3.73
IDH3A-209ENST00000558605 OSCARQ8IYS5 282 aa38.27■■■■□ 3.72
IDH3A-209ENST00000558605 RSF1Q96T23 1441 aaPredicted RBP38.22■■■■□ 3.71
IDH3A-209ENST00000558605 URB2Q14146 1524 aaKnown RBP38.21■■■■□ 3.71
IDH3A-209ENST00000558605 TOP2AP11388 1531 aaKnown RBP38.17■■■■□ 3.7
IDH3A-209ENST00000558605 PRDM2Q13029 1718 aa37.87■■■■□ 3.65
IDH3A-209ENST00000558605 ZNF608Q9ULD9 1512 aaPredicted RBP37.83■■■■□ 3.65
IDH3A-209ENST00000558605 RIMBP3CA6NJZ7 1639 aa37.81■■■■□ 3.64
IDH3A-209ENST00000558605 RIMBP3BA6NNM3 1639 aa37.81■■■■□ 3.64
IDH3A-209ENST00000558605 RIMBP3Q9UFD9 1639 aa37.81■■■■□ 3.64
IDH3A-209ENST00000558605 IFT140Q96RY7 1462 aa37.8■■■■□ 3.64
IDH3A-209ENST00000558605 CCDC88BA6NC98 1476 aa37.78■■■■□ 3.64
IDH3A-209ENST00000558605 TOPBP1Q92547 1522 aa37.69■■■■□ 3.62
IDH3A-209ENST00000558605 ARHGEF11O15085 1522 aa37.64■■■■□ 3.62
IDH3A-209ENST00000558605 EIF4G3O43432 1585 aaKnown RBP37.55■■■■□ 3.6
IDH3A-209ENST00000558605 ABCC8Q09428 1581 aa37.55■■■■□ 3.6
IDH3A-209ENST00000558605 DNMBPQ6XZF7 1577 aa37.48■■■■□ 3.59
IDH3A-209ENST00000558605 CYB5RLQ6IPT4 315 aa37.43■■■■□ 3.58
IDH3A-209ENST00000558605 AQRO60306 1485 aaKnown RBP eCLIP37.43■■■■□ 3.58
IDH3A-209ENST00000558605 TARBP1Q13395 1621 aaKnown RBP37.39■■■■□ 3.58
IDH3A-209ENST00000558605 CHD1O14646 1710 aa37.36■■■■□ 3.57
IDH3A-209ENST00000558605 FBLN2P98095 1184 aa37.28■■■■□ 3.56
IDH3A-209ENST00000558605 POLA1P09884 1462 aaPredicted RBP37.27■■■■□ 3.56
IDH3A-209ENST00000558605 ARAP1Q96P48 1450 aa37.25■■■■□ 3.55
IDH3A-209ENST00000558605 RAD54L2Q9Y4B4 1467 aa37.18■■■■□ 3.54
IDH3A-209ENST00000558605 TRHP20396 242 aaPredicted RBP37.17■■■■□ 3.54
IDH3A-209ENST00000558605 TDRD9Q8NDG6 1382 aaKnown RBP37.13■■■■□ 3.53
IDH3A-209ENST00000558605 SOGA1O94964 1423 aa37.11■■■■□ 3.53
IDH3A-209ENST00000558605 SNAPC4Q5SXM2 1469 aa37.01■■■■□ 3.51
IDH3A-209ENST00000558605 FGD5Q6ZNL6 1462 aa36.97■■■■□ 3.51
IDH3A-209ENST00000558605 CLASP1Q7Z460 1538 aa36.95■■■■□ 3.5
IDH3A-209ENST00000558605 WDR97A6NE52 1622 aa36.92■■■■□ 3.5
IDH3A-209ENST00000558605 CHMP7Q8WUX9 453 aaPredicted RBP36.91■■■■□ 3.5
IDH3A-209ENST00000558605 CUX1P39880 1505 aa36.87■■■■□ 3.49
IDH3A-209ENST00000558605 MAGI1Q96QZ7 1491 aaPredicted RBP36.86■■■■□ 3.49
IDH3A-209ENST00000558605 SYNJ1O43426 1573 aa36.85■■■■□ 3.49
IDH3A-209ENST00000558605 GRIN2BQ13224 1484 aa36.82■■■■□ 3.49
IDH3A-209ENST00000558605 SYNJ2O15056 1496 aa36.75■■■■□ 3.47
IDH3A-209ENST00000558605 GAPVD1Q14C86 1478 aa36.63■■■■□ 3.45
IDH3A-209ENST00000558605 PBRM1Q86U86 1689 aa36.62■■■■□ 3.45
IDH3A-209ENST00000558605 ABCA10Q8WWZ4 1543 aa36.51■■■■□ 3.44
IDH3A-209ENST00000558605 ABCA5Q8WWZ7 1642 aa36.49■■■■□ 3.43
IDH3A-209ENST00000558605 AEBP2Q6ZN18 517 aaPredicted RBP36.44■■■■□ 3.42
IDH3A-209ENST00000558605 ERCC6L2Q5T890 1561 aa36.37■■■■□ 3.41
IDH3A-209ENST00000558605 GRIN2AQ12879 1464 aa36.36■■■■□ 3.41
IDH3A-209ENST00000558605 WRNQ14191 1432 aaPredicted RBP eCLIP36.27■■■■□ 3.4
IDH3A-209ENST00000558605 ADAMTS12P58397 1594 aa36.26■■■■□ 3.39
IDH3A-209ENST00000558605 CEP170Q5SW79 1584 aa36.26■■■■□ 3.39
IDH3A-209ENST00000558605 NUP160Q12769 1436 aa36.25■■■■□ 3.39
IDH3A-209ENST00000558605 SUPT5HO00267 1087 aaKnown RBP36.18■■■■□ 3.38
IDH3A-209ENST00000558605 FHAD1B1AJZ9 1412 aa36.15■■■■□ 3.38
IDH3A-209ENST00000558605 SHROOM2Q13796 1616 aa36.13■■■■□ 3.37
IDH3A-209ENST00000558605 TOP2BQ02880 1626 aa36.11■■■■□ 3.37
IDH3A-209ENST00000558605 BIVM-ERCC5R4GMW8 1640 aa36.11■■■■□ 3.37
IDH3A-209ENST00000558605 ERICH3Q5RHP9 1530 aa36.03■■■■□ 3.36
IDH3A-209ENST00000558605 PRG4Q92954 1404 aaPredicted RBP35.96■■■■□ 3.35
IDH3A-209ENST00000558605 KIF13AQ9H1H9 1805 aa35.92■■■■□ 3.34
IDH3A-209ENST00000558605 JPH4Q96JJ6 628 aa35.91■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms