RNA–Protein interactions for RNA: ENST00000558547.1

PIF1-204, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 2

Gene PIF1, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-204ENST00000558547 NISCHQ9Y2I1 1504 aa18.54■□□□□ 0.56
PIF1-204ENST00000558547 ABCC9O60706 1549 aa17.28■□□□□ 0.36
PIF1-204ENST00000558547 CCDC180Q9P1Z9 1646 aa16.81■□□□□ 0.28
PIF1-204ENST00000558547 DNAJC5BQ9UF47 199 aa16.62■□□□□ 0.25
PIF1-204ENST00000558547 RB1CC1Q8TDY2 1594 aa16.2■□□□□ 0.18
PIF1-204ENST00000558547 PABPN1Q86U42 306 aaKnown RBP eCLIP16.02■□□□□ 0.16
PIF1-204ENST00000558547 NACADO15069 1562 aa15.96■□□□□ 0.15
PIF1-204ENST00000558547 UNC13AQ9UPW8 1703 aa15.96■□□□□ 0.15
PIF1-204ENST00000558547 DCAF8L2P0C7V8 631 aa15.87■□□□□ 0.13
PIF1-204ENST00000558547 BICRAQ9NZM4 1560 aa15.81■□□□□ 0.12
PIF1-204ENST00000558547 CC2D2AQ9P2K1 1620 aa15.58■□□□□ 0.09
PIF1-204ENST00000558547 CECR2Q9BXF3 1484 aa15.57■□□□□ 0.08
PIF1-204ENST00000558547 MYO15BQ96JP2 1530 aa15.56■□□□□ 0.08
PIF1-204ENST00000558547 DNAJC5Q9H3Z4 198 aa15.49■□□□□ 0.07
PIF1-204ENST00000558547 EIF4G1Q04637 1599 aaKnown RBP15.43■□□□□ 0.06
PIF1-204ENST00000558547 SHROOM4Q9ULL8 1493 aa15.41■□□□□ 0.06
PIF1-204ENST00000558547 SCRIBQ14160 1630 aa15.35■□□□□ 0.05
PIF1-204ENST00000558547 ZCCHC6Q5VYS8 1495 aaKnown RBP15.27■□□□□ 0.03
PIF1-204ENST00000558547 DCAF1Q9Y4B6 1507 aa15.23■□□□□ 0.03
PIF1-204ENST00000558547 CUX2O14529 1486 aa14.98□□□□□ -0.01
PIF1-204ENST00000558547 ERCC6Q03468 1493 aa14.89□□□□□ -0.03
PIF1-204ENST00000558547 NESP48681 1621 aa14.75□□□□□ -0.05
PIF1-204ENST00000558547 NCAPD3P42695 1498 aa14.75□□□□□ -0.05
PIF1-204ENST00000558547 TRIM41Q8WV44 630 aa14.69□□□□□ -0.06
PIF1-204ENST00000558547 ATAD2BQ9ULI0 1458 aa14.67□□□□□ -0.06
PIF1-204ENST00000558547 THOC2Q8NI27 1593 aaKnown RBP14.66□□□□□ -0.06
PIF1-204ENST00000558547 HMGXB3Q12766 1538 aa14.61□□□□□ -0.07
PIF1-204ENST00000558547 SMARCA4P51532 1647 aa14.58□□□□□ -0.08
PIF1-204ENST00000558547 SMARCA2P51531 1590 aa14.57□□□□□ -0.08
PIF1-204ENST00000558547 KIF21AQ7Z4S6 1674 aa14.56□□□□□ -0.08
PIF1-204ENST00000558547 LAMC3Q9Y6N6 1575 aa14.5□□□□□ -0.09
PIF1-204ENST00000558547 BAZ1BQ9UIG0 1483 aaKnown RBP14.5□□□□□ -0.09
PIF1-204ENST00000558547 PDS5BQ9NTI5 1447 aa14.4□□□□□ -0.1
PIF1-204ENST00000558547 PEG3Q9GZU2 1588 aa14.39□□□□□ -0.11
PIF1-204ENST00000558547 BAZ1AQ9NRL2 1556 aaPredicted RBP14.39□□□□□ -0.11
PIF1-204ENST00000558547 MRC2Q9UBG0 1479 aa14.33□□□□□ -0.12
PIF1-204ENST00000558547 WDR62O43379 1518 aa14.32□□□□□ -0.12
PIF1-204ENST00000558547 MROH2BQ7Z745 1585 aa14.32□□□□□ -0.12
PIF1-204ENST00000558547 CADPSQ9ULU8 1353 aa14.28□□□□□ -0.12
PIF1-204ENST00000558547 OSCARQ8IYS5 282 aa14.23□□□□□ -0.13
PIF1-204ENST00000558547 CEP164Q9UPV0 1460 aa14.19□□□□□ -0.14
PIF1-204ENST00000558547 RIMBP3CA6NJZ7 1639 aa14.18□□□□□ -0.14
PIF1-204ENST00000558547 RIMBP3BA6NNM3 1639 aa14.18□□□□□ -0.14
PIF1-204ENST00000558547 RIMBP3Q9UFD9 1639 aa14.18□□□□□ -0.14
PIF1-204ENST00000558547 WIZO95785 1651 aa14.16□□□□□ -0.14
PIF1-204ENST00000558547 FANCD2Q9BXW9 1451 aa14.15□□□□□ -0.14
PIF1-204ENST00000558547 URB2Q14146 1524 aaKnown RBP14.09□□□□□ -0.15
PIF1-204ENST00000558547 ARHGEF11O15085 1522 aa14.05□□□□□ -0.16
PIF1-204ENST00000558547 CFTRP13569 1480 aa14.04□□□□□ -0.16
PIF1-204ENST00000558547 ZNF608Q9ULD9 1512 aaPredicted RBP14□□□□□ -0.17
PIF1-204ENST00000558547 CYB5RLQ6IPT4 315 aa13.98□□□□□ -0.17
PIF1-204ENST00000558547 TRHP20396 242 aaPredicted RBP13.96□□□□□ -0.17
PIF1-204ENST00000558547 PRDM2Q13029 1718 aa13.93□□□□□ -0.18
PIF1-204ENST00000558547 CHD1O14646 1710 aa13.91□□□□□ -0.18
PIF1-204ENST00000558547 ARAP1Q96P48 1450 aa13.9□□□□□ -0.18
PIF1-204ENST00000558547 IFT140Q96RY7 1462 aa13.9□□□□□ -0.18
PIF1-204ENST00000558547 EIF4G3O43432 1585 aaKnown RBP13.9□□□□□ -0.18
PIF1-204ENST00000558547 TOP2AP11388 1531 aaKnown RBP13.88□□□□□ -0.19
PIF1-204ENST00000558547 TOPBP1Q92547 1522 aa13.85□□□□□ -0.19
PIF1-204ENST00000558547 RSF1Q96T23 1441 aaPredicted RBP13.83□□□□□ -0.2
PIF1-204ENST00000558547 AEBP2Q6ZN18 517 aaPredicted RBP13.83□□□□□ -0.2
PIF1-204ENST00000558547 AQRO60306 1485 aaKnown RBP eCLIP13.8□□□□□ -0.2
PIF1-204ENST00000558547 FBLN2P98095 1184 aa13.79□□□□□ -0.2
PIF1-204ENST00000558547 TARBP1Q13395 1621 aaKnown RBP13.78□□□□□ -0.2
PIF1-204ENST00000558547 CCDC88BA6NC98 1476 aa13.75□□□□□ -0.21
PIF1-204ENST00000558547 DNMBPQ6XZF7 1577 aa13.75□□□□□ -0.21
PIF1-204ENST00000558547 ABCC8Q09428 1581 aa13.71□□□□□ -0.22
PIF1-204ENST00000558547 CLASP1Q7Z460 1538 aa13.69□□□□□ -0.22
PIF1-204ENST00000558547 POLA1P09884 1462 aaPredicted RBP13.67□□□□□ -0.22
PIF1-204ENST00000558547 RAD54L2Q9Y4B4 1467 aa13.67□□□□□ -0.22
PIF1-204ENST00000558547 TDRD9Q8NDG6 1382 aaKnown RBP13.65□□□□□ -0.22
PIF1-204ENST00000558547 SNAPC4Q5SXM2 1469 aa13.63□□□□□ -0.23
PIF1-204ENST00000558547 SYNJ1O43426 1573 aa13.6□□□□□ -0.23
PIF1-204ENST00000558547 SOGA1O94964 1423 aa13.58□□□□□ -0.24
PIF1-204ENST00000558547 CHMP7Q8WUX9 453 aaPredicted RBP13.57□□□□□ -0.24
PIF1-204ENST00000558547 GAPVD1Q14C86 1478 aa13.55□□□□□ -0.24
PIF1-204ENST00000558547 FGD5Q6ZNL6 1462 aa13.54□□□□□ -0.24
PIF1-204ENST00000558547 MAGI1Q96QZ7 1491 aaPredicted RBP13.53□□□□□ -0.24
PIF1-204ENST00000558547 WDR97A6NE52 1622 aa13.51□□□□□ -0.25
PIF1-204ENST00000558547 SYNJ2O15056 1496 aa13.51□□□□□ -0.25
PIF1-204ENST00000558547 PBRM1Q86U86 1689 aa13.5□□□□□ -0.25
PIF1-204ENST00000558547 ERCC6L2Q5T890 1561 aa13.5□□□□□ -0.25
PIF1-204ENST00000558547 GRIN2BQ13224 1484 aa13.5□□□□□ -0.25
PIF1-204ENST00000558547 CUX1P39880 1505 aa13.47□□□□□ -0.25
PIF1-204ENST00000558547 KIF13AQ9H1H9 1805 aa13.45□□□□□ -0.26
PIF1-204ENST00000558547 CEP170Q5SW79 1584 aa13.39□□□□□ -0.27
PIF1-204ENST00000558547 ABCA5Q8WWZ7 1642 aa13.38□□□□□ -0.27
PIF1-204ENST00000558547 GRIN2AQ12879 1464 aa13.36□□□□□ -0.27
PIF1-204ENST00000558547 ILDR1Q86SU0 546 aaPredicted RBP13.34□□□□□ -0.27
PIF1-204ENST00000558547 SHROOM2Q13796 1616 aa13.33□□□□□ -0.28
PIF1-204ENST00000558547 ABCA10Q8WWZ4 1543 aa13.32□□□□□ -0.28
PIF1-204ENST00000558547 ADAMTS12P58397 1594 aa13.31□□□□□ -0.28
PIF1-204ENST00000558547 NUP160Q12769 1436 aa13.3□□□□□ -0.28
PIF1-204ENST00000558547 KDM4FA0A1W2PPD8 638 aa13.3□□□□□ -0.28
PIF1-204ENST00000558547 FAM69CQ0P6D2 419 aa13.25□□□□□ -0.29
PIF1-204ENST00000558547 ABCC10Q5T3U5 1492 aa13.23□□□□□ -0.29
PIF1-204ENST00000558547 PRG4Q92954 1404 aaPredicted RBP13.23□□□□□ -0.29
PIF1-204ENST00000558547 DIP2BQ9P265 1576 aa13.23□□□□□ -0.29
PIF1-204ENST00000558547 KDM6BO15054 1643 aa13.22□□□□□ -0.29
PIF1-204ENST00000558547 TSPOAP1O95153 1857 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms