RNA–Protein interactions for RNA: ENST00000558540.5

MRVI1-217, Transcript of murine retrovirus integration site 1 homolog, humanhuman

TSL 2 BASIC

Gene MRVI1, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRVI1-217ENST00000558540 NISCHQ9Y2I1 1504 aa24.43■■□□□ 1.5
MRVI1-217ENST00000558540 CCDC180Q9P1Z9 1646 aa21.67■■□□□ 1.06
MRVI1-217ENST00000558540 ZCCHC6Q5VYS8 1495 aaKnown RBP20.58■□□□□ 0.88
MRVI1-217ENST00000558540 DCAF1Q9Y4B6 1507 aa20.45■□□□□ 0.86
MRVI1-217ENST00000558540 MYO15BQ96JP2 1530 aa20.3■□□□□ 0.84
MRVI1-217ENST00000558540 NACADO15069 1562 aa20.04■□□□□ 0.8
MRVI1-217ENST00000558540 ABCC9O60706 1549 aa20.01■□□□□ 0.79
MRVI1-217ENST00000558540 RB1CC1Q8TDY2 1594 aa19.84■□□□□ 0.77
MRVI1-217ENST00000558540 UNC13AQ9UPW8 1703 aa19.63■□□□□ 0.73
MRVI1-217ENST00000558540 SCRIBQ14160 1630 aa19.51■□□□□ 0.71
MRVI1-217ENST00000558540 DCAF8L2P0C7V8 631 aa19.4■□□□□ 0.7
MRVI1-217ENST00000558540 BICRAQ9NZM4 1560 aa19.31■□□□□ 0.68
MRVI1-217ENST00000558540 SHROOM4Q9ULL8 1493 aa19.28■□□□□ 0.68
MRVI1-217ENST00000558540 BAZ1AQ9NRL2 1556 aaPredicted RBP18.9■□□□□ 0.62
MRVI1-217ENST00000558540 SMARCA4P51532 1647 aa18.87■□□□□ 0.61
MRVI1-217ENST00000558540 PEG3Q9GZU2 1588 aa18.82■□□□□ 0.6
MRVI1-217ENST00000558540 CECR2Q9BXF3 1484 aa18.82■□□□□ 0.6
MRVI1-217ENST00000558540 MROH2BQ7Z745 1585 aa18.78■□□□□ 0.6
MRVI1-217ENST00000558540 RSF1Q96T23 1441 aaPredicted RBP18.78■□□□□ 0.6
MRVI1-217ENST00000558540 WIZO95785 1651 aa18.66■□□□□ 0.58
MRVI1-217ENST00000558540 EIF4G1Q04637 1599 aaKnown RBP18.64■□□□□ 0.57
MRVI1-217ENST00000558540 PABPN1Q86U42 306 aaKnown RBP eCLIP18.62■□□□□ 0.57
MRVI1-217ENST00000558540 TOP2AP11388 1531 aaKnown RBP18.56■□□□□ 0.56
MRVI1-217ENST00000558540 SMARCA2P51531 1590 aa18.55■□□□□ 0.56
MRVI1-217ENST00000558540 HMGXB3Q12766 1538 aa18.5■□□□□ 0.55
MRVI1-217ENST00000558540 ATAD2BQ9ULI0 1458 aa18.47■□□□□ 0.55
MRVI1-217ENST00000558540 NCAPD3P42695 1498 aa18.4■□□□□ 0.54
MRVI1-217ENST00000558540 CC2D2AQ9P2K1 1620 aa18.37■□□□□ 0.53
MRVI1-217ENST00000558540 SUPT5HO00267 1087 aaKnown RBP18.34■□□□□ 0.53
MRVI1-217ENST00000558540 BAZ1BQ9UIG0 1483 aaKnown RBP18.3■□□□□ 0.52
MRVI1-217ENST00000558540 PRDM2Q13029 1718 aa18.2■□□□□ 0.5
MRVI1-217ENST00000558540 CCDC88BA6NC98 1476 aa18.2■□□□□ 0.5
MRVI1-217ENST00000558540 CFTRP13569 1480 aa17.94■□□□□ 0.46
MRVI1-217ENST00000558540 PPARGC1BQ86YN6 1023 aaKnown RBP17.89■□□□□ 0.45
MRVI1-217ENST00000558540 LAMC3Q9Y6N6 1575 aa17.88■□□□□ 0.45
MRVI1-217ENST00000558540 BIVM-ERCC5R4GMW8 1640 aa17.82■□□□□ 0.44
MRVI1-217ENST00000558540 CADPSQ9ULU8 1353 aa17.77■□□□□ 0.44
MRVI1-217ENST00000558540 CHIC1Q5VXU3 224 aa17.75■□□□□ 0.43
MRVI1-217ENST00000558540 TOP2BQ02880 1626 aa17.73■□□□□ 0.43
MRVI1-217ENST00000558540 ABCC8Q09428 1581 aa17.72■□□□□ 0.43
MRVI1-217ENST00000558540 SYNJ1O43426 1573 aa17.71■□□□□ 0.43
MRVI1-217ENST00000558540 PCGF6Q9BYE7 350 aa17.69■□□□□ 0.42
MRVI1-217ENST00000558540 DNAJC5BQ9UF47 199 aa17.67■□□□□ 0.42
MRVI1-217ENST00000558540 HRCP23327 699 aa17.66■□□□□ 0.42
MRVI1-217ENST00000558540 KIF21AQ7Z4S6 1674 aa17.65■□□□□ 0.42
MRVI1-217ENST00000558540 WRNQ14191 1432 aaPredicted RBP eCLIP17.62■□□□□ 0.41
MRVI1-217ENST00000558540 CUX1P39880 1505 aa17.61■□□□□ 0.41
MRVI1-217ENST00000558540 NESP48681 1621 aa17.6■□□□□ 0.41
MRVI1-217ENST00000558540 FANCD2Q9BXW9 1451 aa17.59■□□□□ 0.41
MRVI1-217ENST00000558540 DNMBPQ6XZF7 1577 aa17.58■□□□□ 0.4
MRVI1-217ENST00000558540 WDR97A6NE52 1622 aa17.53■□□□□ 0.4
MRVI1-217ENST00000558540 PDS5BQ9NTI5 1447 aa17.52■□□□□ 0.39
MRVI1-217ENST00000558540 CEP164Q9UPV0 1460 aa17.52■□□□□ 0.39
MRVI1-217ENST00000558540 THOC2Q8NI27 1593 aaKnown RBP17.47■□□□□ 0.39
MRVI1-217ENST00000558540 WDR62O43379 1518 aa17.45■□□□□ 0.38
MRVI1-217ENST00000558540 TOPBP1Q92547 1522 aa17.45■□□□□ 0.38
MRVI1-217ENST00000558540 URB2Q14146 1524 aaKnown RBP17.45■□□□□ 0.38
MRVI1-217ENST00000558540 EEA1Q15075 1411 aa17.43■□□□□ 0.38
MRVI1-217ENST00000558540 TRIM41Q8WV44 630 aa17.41■□□□□ 0.38
MRVI1-217ENST00000558540 MRC2Q9UBG0 1479 aa17.4■□□□□ 0.38
MRVI1-217ENST00000558540 FGD5Q6ZNL6 1462 aa17.37■□□□□ 0.37
MRVI1-217ENST00000558540 TARBP1Q13395 1621 aaKnown RBP17.36■□□□□ 0.37
MRVI1-217ENST00000558540 KIF21BO75037 1637 aa17.34■□□□□ 0.37
MRVI1-217ENST00000558540 POLA1P09884 1462 aaPredicted RBP17.33■□□□□ 0.37
MRVI1-217ENST00000558540 ABCA10Q8WWZ4 1543 aa17.33■□□□□ 0.37
MRVI1-217ENST00000558540 ABCA5Q8WWZ7 1642 aa17.32■□□□□ 0.36
MRVI1-217ENST00000558540 SOGA1O94964 1423 aa17.28■□□□□ 0.36
MRVI1-217ENST00000558540 ERICH3Q5RHP9 1530 aa17.24■□□□□ 0.35
MRVI1-217ENST00000558540 RUSC2Q8N2Y8 1516 aa17.24■□□□□ 0.35
MRVI1-217ENST00000558540 CUX2O14529 1486 aa17.22■□□□□ 0.35
MRVI1-217ENST00000558540 CUL7Q14999 1698 aa17.21■□□□□ 0.35
MRVI1-217ENST00000558540 PBRM1Q86U86 1689 aa17.21■□□□□ 0.35
MRVI1-217ENST00000558540 KIF27Q86VH2 1401 aa17.18■□□□□ 0.34
MRVI1-217ENST00000558540 PRXQ9BXM0 1461 aa17.17■□□□□ 0.34
MRVI1-217ENST00000558540 ERCC6Q03468 1493 aa17.16■□□□□ 0.34
MRVI1-217ENST00000558540 IFT140Q96RY7 1462 aa17.16■□□□□ 0.34
MRVI1-217ENST00000558540 RAD54L2Q9Y4B4 1467 aa17.14■□□□□ 0.33
MRVI1-217ENST00000558540 PELP1Q8IZL8 1130 aaKnown RBP17.11■□□□□ 0.33
MRVI1-217ENST00000558540 EIF4G3O43432 1585 aaKnown RBP17.09■□□□□ 0.33
MRVI1-217ENST00000558540 GOLGA3Q08378 1498 aa17.09■□□□□ 0.33
MRVI1-217ENST00000558540 SCAF1Q9H7N4 1312 aaKnown RBP17.07■□□□□ 0.32
MRVI1-217ENST00000558540 ADAMTS12P58397 1594 aa17.05■□□□□ 0.32
MRVI1-217ENST00000558540 CSRNP3Q8WYN3 585 aa17.04■□□□□ 0.32
MRVI1-217ENST00000558540 EHMT2Q96KQ7 1210 aa17.04■□□□□ 0.32
MRVI1-217ENST00000558540 IGF1RP08069 1367 aa17.03■□□□□ 0.32
MRVI1-217ENST00000558540 CTTNBP2Q8WZ74 1663 aa17.03■□□□□ 0.32
MRVI1-217ENST00000558540 GAPVD1Q14C86 1478 aa17.03■□□□□ 0.32
MRVI1-217ENST00000558540 RAPGEF2Q9Y4G8 1499 aa17■□□□□ 0.31
MRVI1-217ENST00000558540 TNIKQ9UKE5 1360 aa16.99■□□□□ 0.31
MRVI1-217ENST00000558540 GRIN2BQ13224 1484 aa16.96■□□□□ 0.31
MRVI1-217ENST00000558540 ZNF608Q9ULD9 1512 aaPredicted RBP16.95■□□□□ 0.3
MRVI1-217ENST00000558540 MAGI1Q96QZ7 1491 aaPredicted RBP16.92■□□□□ 0.3
MRVI1-217ENST00000558540 LOC105371045A0A1W2PR82 267 aa16.91■□□□□ 0.3
MRVI1-217ENST00000558540 CARMIL1Q5VZK9 1371 aa16.88■□□□□ 0.29
MRVI1-217ENST00000558540 FHAD1B1AJZ9 1412 aa16.88■□□□□ 0.29
MRVI1-217ENST00000558540 AQRO60306 1485 aaKnown RBP eCLIP16.86■□□□□ 0.29
MRVI1-217ENST00000558540 TDRD9Q8NDG6 1382 aaKnown RBP16.86■□□□□ 0.29
MRVI1-217ENST00000558540 FAM9AQ8IZU1 332 aaPredicted RBP16.85■□□□□ 0.29
MRVI1-217ENST00000558540 CEP162Q5TB80 1403 aa16.83■□□□□ 0.29
MRVI1-217ENST00000558540 SAMD9Q5K651 1589 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms