RNA–Protein interactions for RNA: ENST00000558489.1

BMP4-203, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 605 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-203ENST00000558489 NISCHQ9Y2I1 1504 aa37.04■■■■□ 3.52
BMP4-203ENST00000558489 CCDC180Q9P1Z9 1646 aa33.22■■■□□ 2.91
BMP4-203ENST00000558489 ABCC9O60706 1549 aa32.92■■■□□ 2.86
BMP4-203ENST00000558489 RB1CC1Q8TDY2 1594 aa31.43■■■□□ 2.62
BMP4-203ENST00000558489 NACADO15069 1562 aa31.28■■■□□ 2.6
BMP4-203ENST00000558489 MYO15BQ96JP2 1530 aa30.95■■■□□ 2.55
BMP4-203ENST00000558489 UNC13AQ9UPW8 1703 aa30.94■■■□□ 2.54
BMP4-203ENST00000558489 DCAF8L2P0C7V8 631 aa30.88■■■□□ 2.53
BMP4-203ENST00000558489 ZCCHC6Q5VYS8 1495 aaKnown RBP30.77■■■□□ 2.52
BMP4-203ENST00000558489 DNAJC5BQ9UF47 199 aa30.76■■■□□ 2.51
BMP4-203ENST00000558489 BICRAQ9NZM4 1560 aa30.66■■■□□ 2.5
BMP4-203ENST00000558489 DCAF1Q9Y4B6 1507 aa30.63■■■□□ 2.49
BMP4-203ENST00000558489 PABPN1Q86U42 306 aaKnown RBP eCLIP30.6■■■□□ 2.49
BMP4-203ENST00000558489 SCRIBQ14160 1630 aa30.22■■■□□ 2.43
BMP4-203ENST00000558489 SHROOM4Q9ULL8 1493 aa30.15■■■□□ 2.42
BMP4-203ENST00000558489 CC2D2AQ9P2K1 1620 aa29.82■■■□□ 2.36
BMP4-203ENST00000558489 EIF4G1Q04637 1599 aaKnown RBP29.81■■■□□ 2.36
BMP4-203ENST00000558489 CECR2Q9BXF3 1484 aa29.63■■■□□ 2.33
BMP4-203ENST00000558489 SMARCA4P51532 1647 aa28.89■■■□□ 2.22
BMP4-203ENST00000558489 NCAPD3P42695 1498 aa28.87■■■□□ 2.21
BMP4-203ENST00000558489 ATAD2BQ9ULI0 1458 aa28.82■■■□□ 2.2
BMP4-203ENST00000558489 HMGXB3Q12766 1538 aa28.73■■■□□ 2.19
BMP4-203ENST00000558489 SMARCA2P51531 1590 aa28.72■■■□□ 2.19
BMP4-203ENST00000558489 BAZ1AQ9NRL2 1556 aaPredicted RBP28.71■■■□□ 2.19
BMP4-203ENST00000558489 PEG3Q9GZU2 1588 aa28.64■■■□□ 2.18
BMP4-203ENST00000558489 MROH2BQ7Z745 1585 aa28.56■■■□□ 2.16
BMP4-203ENST00000558489 BAZ1BQ9UIG0 1483 aaKnown RBP28.5■■■□□ 2.15
BMP4-203ENST00000558489 NESP48681 1621 aa28.4■■■□□ 2.14
BMP4-203ENST00000558489 ERCC6Q03468 1493 aa28.33■■■□□ 2.13
BMP4-203ENST00000558489 CUX2O14529 1486 aa28.3■■■□□ 2.12
BMP4-203ENST00000558489 WIZO95785 1651 aa28.25■■■□□ 2.11
BMP4-203ENST00000558489 LAMC3Q9Y6N6 1575 aa28.2■■■□□ 2.11
BMP4-203ENST00000558489 THOC2Q8NI27 1593 aaKnown RBP28.15■■■□□ 2.1
BMP4-203ENST00000558489 KIF21AQ7Z4S6 1674 aa28.11■■■□□ 2.09
BMP4-203ENST00000558489 DNAJC5Q9H3Z4 198 aa28.03■■■□□ 2.08
BMP4-203ENST00000558489 RSF1Q96T23 1441 aaPredicted RBP28■■■□□ 2.07
BMP4-203ENST00000558489 CADPSQ9ULU8 1353 aa27.95■■■□□ 2.06
BMP4-203ENST00000558489 PDS5BQ9NTI5 1447 aa27.92■■■□□ 2.06
BMP4-203ENST00000558489 TOP2AP11388 1531 aaKnown RBP27.87■■■□□ 2.05
BMP4-203ENST00000558489 MRC2Q9UBG0 1479 aa27.76■■■□□ 2.03
BMP4-203ENST00000558489 WDR62O43379 1518 aa27.74■■■□□ 2.03
BMP4-203ENST00000558489 CFTRP13569 1480 aa27.73■■■□□ 2.03
BMP4-203ENST00000558489 CEP164Q9UPV0 1460 aa27.66■■■□□ 2.02
BMP4-203ENST00000558489 FANCD2Q9BXW9 1451 aa27.65■■■□□ 2.02
BMP4-203ENST00000558489 PRDM2Q13029 1718 aa27.61■■■□□ 2.01
BMP4-203ENST00000558489 CCDC88BA6NC98 1476 aa27.51■■■□□ 2
BMP4-203ENST00000558489 URB2Q14146 1524 aaKnown RBP27.49■■□□□ 1.99
BMP4-203ENST00000558489 SUPT5HO00267 1087 aaKnown RBP27.19■■□□□ 1.94
BMP4-203ENST00000558489 TOPBP1Q92547 1522 aa27.19■■□□□ 1.94
BMP4-203ENST00000558489 DNMBPQ6XZF7 1577 aa27.12■■□□□ 1.93
BMP4-203ENST00000558489 ZNF608Q9ULD9 1512 aaPredicted RBP27.11■■□□□ 1.93
BMP4-203ENST00000558489 IFT140Q96RY7 1462 aa27.09■■□□□ 1.93
BMP4-203ENST00000558489 ABCC8Q09428 1581 aa27.05■■□□□ 1.92
BMP4-203ENST00000558489 TARBP1Q13395 1621 aaKnown RBP27.02■■□□□ 1.92
BMP4-203ENST00000558489 EIF4G3O43432 1585 aaKnown RBP27■■□□□ 1.91
BMP4-203ENST00000558489 POLA1P09884 1462 aaPredicted RBP26.93■■□□□ 1.9
BMP4-203ENST00000558489 OSCARQ8IYS5 282 aa26.9■■□□□ 1.9
BMP4-203ENST00000558489 CUX1P39880 1505 aa26.83■■□□□ 1.89
BMP4-203ENST00000558489 AQRO60306 1485 aaKnown RBP eCLIP26.82■■□□□ 1.882e-11■■■■■ 45
BMP4-203ENST00000558489 RAD54L2Q9Y4B4 1467 aa26.81■■□□□ 1.88
BMP4-203ENST00000558489 CHD1O14646 1710 aa26.79■■□□□ 1.88
BMP4-203ENST00000558489 FGD5Q6ZNL6 1462 aa26.77■■□□□ 1.88
BMP4-203ENST00000558489 TRIM41Q8WV44 630 aa26.77■■□□□ 1.88
BMP4-203ENST00000558489 RIMBP3CA6NJZ7 1639 aa26.74■■□□□ 1.87
BMP4-203ENST00000558489 RIMBP3BA6NNM3 1639 aa26.74■■□□□ 1.87
BMP4-203ENST00000558489 RIMBP3Q9UFD9 1639 aa26.74■■□□□ 1.87
BMP4-203ENST00000558489 WDR97A6NE52 1622 aa26.72■■□□□ 1.87
BMP4-203ENST00000558489 SOGA1O94964 1423 aa26.71■■□□□ 1.87
BMP4-203ENST00000558489 TDRD9Q8NDG6 1382 aaKnown RBP26.65■■□□□ 1.86
BMP4-203ENST00000558489 ARHGEF11O15085 1522 aa26.65■■□□□ 1.86
BMP4-203ENST00000558489 SNAPC4Q5SXM2 1469 aa26.57■■□□□ 1.84
BMP4-203ENST00000558489 PBRM1Q86U86 1689 aa26.54■■□□□ 1.84
BMP4-203ENST00000558489 ABCA5Q8WWZ7 1642 aa26.5■■□□□ 1.83
BMP4-203ENST00000558489 MAGI1Q96QZ7 1491 aaPredicted RBP26.5■■□□□ 1.83
BMP4-203ENST00000558489 GRIN2BQ13224 1484 aa26.49■■□□□ 1.83
BMP4-203ENST00000558489 ABCA10Q8WWZ4 1543 aa26.49■■□□□ 1.83
BMP4-203ENST00000558489 BIVM-ERCC5R4GMW8 1640 aa26.48■■□□□ 1.83
BMP4-203ENST00000558489 CLASP1Q7Z460 1538 aa26.48■■□□□ 1.83
BMP4-203ENST00000558489 TOP2BQ02880 1626 aa26.44■■□□□ 1.82
BMP4-203ENST00000558489 SYNJ1O43426 1573 aa26.44■■□□□ 1.82
BMP4-203ENST00000558489 FBLN2P98095 1184 aa26.43■■□□□ 1.82
BMP4-203ENST00000558489 GAPVD1Q14C86 1478 aa26.42■■□□□ 1.82
BMP4-203ENST00000558489 ARAP1Q96P48 1450 aa26.42■■□□□ 1.82
BMP4-203ENST00000558489 SYNJ2O15056 1496 aa26.41■■□□□ 1.82
BMP4-203ENST00000558489 WRNQ14191 1432 aaPredicted RBP eCLIP26.34■■□□□ 1.81
BMP4-203ENST00000558489 CHMP7Q8WUX9 453 aaPredicted RBP26.29■■□□□ 1.8
BMP4-203ENST00000558489 CYB5RLQ6IPT4 315 aa26.27■■□□□ 1.8
BMP4-203ENST00000558489 ADAMTS12P58397 1594 aa26.27■■□□□ 1.8
BMP4-203ENST00000558489 GRIN2AQ12879 1464 aa26.19■■□□□ 1.78
BMP4-203ENST00000558489 CEP170Q5SW79 1584 aa26.16■■□□□ 1.78
BMP4-203ENST00000558489 ERICH3Q5RHP9 1530 aa26.15■■□□□ 1.78
BMP4-203ENST00000558489 NUP160Q12769 1436 aa26.13■■□□□ 1.77
BMP4-203ENST00000558489 ERCC6L2Q5T890 1561 aa26.09■■□□□ 1.77
BMP4-203ENST00000558489 FHAD1B1AJZ9 1412 aa26.09■■□□□ 1.77
BMP4-203ENST00000558489 SHROOM2Q13796 1616 aa26.06■■□□□ 1.76
BMP4-203ENST00000558489 RUSC2Q8N2Y8 1516 aa25.91■■□□□ 1.74
BMP4-203ENST00000558489 TRHP20396 242 aaPredicted RBP25.83■■□□□ 1.73
BMP4-203ENST00000558489 CUL7Q14999 1698 aa25.83■■□□□ 1.73
BMP4-203ENST00000558489 IGF1RP08069 1367 aa25.82■■□□□ 1.72
BMP4-203ENST00000558489 KIF27Q86VH2 1401 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms