RNA–Protein interactions for RNA: ENST00000558485.1

NEO1-203, Transcript of neogenin 1, humanhuman

TSL 2

Gene NEO1, Length 374 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-203ENST00000558485 NISCHQ9Y2I1 1504 aa24.38■■□□□ 1.49
NEO1-203ENST00000558485 CCDC180Q9P1Z9 1646 aa21.54■■□□□ 1.04
NEO1-203ENST00000558485 ABCC9O60706 1549 aa20.7■□□□□ 0.9
NEO1-203ENST00000558485 ZCCHC6Q5VYS8 1495 aaKnown RBP20.4■□□□□ 0.86
NEO1-203ENST00000558485 DCAF1Q9Y4B6 1507 aa20.17■□□□□ 0.82
NEO1-203ENST00000558485 DCAF8L2P0C7V8 631 aa20.15■□□□□ 0.82
NEO1-203ENST00000558485 NACADO15069 1562 aa20.12■□□□□ 0.81
NEO1-203ENST00000558485 MYO15BQ96JP2 1530 aa20.12■□□□□ 0.81
NEO1-203ENST00000558485 RB1CC1Q8TDY2 1594 aa20.06■□□□□ 0.8
NEO1-203ENST00000558485 UNC13AQ9UPW8 1703 aa19.71■□□□□ 0.75
NEO1-203ENST00000558485 SCRIBQ14160 1630 aa19.69■□□□□ 0.74
NEO1-203ENST00000558485 BICRAQ9NZM4 1560 aa19.5■□□□□ 0.71
NEO1-203ENST00000558485 SHROOM4Q9ULL8 1493 aa19.48■□□□□ 0.71
NEO1-203ENST00000558485 PABPN1Q86U42 306 aaKnown RBP eCLIP19.39■□□□□ 0.69
NEO1-203ENST00000558485 CECR2Q9BXF3 1484 aa18.97■□□□□ 0.63
NEO1-203ENST00000558485 EIF4G1Q04637 1599 aaKnown RBP18.92■□□□□ 0.62
NEO1-203ENST00000558485 SMARCA4P51532 1647 aa18.86■□□□□ 0.61
NEO1-203ENST00000558485 BAZ1AQ9NRL2 1556 aaPredicted RBP18.85■□□□□ 0.61
NEO1-203ENST00000558485 MROH2BQ7Z745 1585 aa18.82■□□□□ 0.6
NEO1-203ENST00000558485 CC2D2AQ9P2K1 1620 aa18.76■□□□□ 0.59
NEO1-203ENST00000558485 RSF1Q96T23 1441 aaPredicted RBP18.71■□□□□ 0.59
NEO1-203ENST00000558485 DNAJC5BQ9UF47 199 aa18.68■□□□□ 0.58
NEO1-203ENST00000558485 WIZO95785 1651 aa18.66■□□□□ 0.58
NEO1-203ENST00000558485 PEG3Q9GZU2 1588 aa18.66■□□□□ 0.58
NEO1-203ENST00000558485 ATAD2BQ9ULI0 1458 aa18.64■□□□□ 0.57
NEO1-203ENST00000558485 SMARCA2P51531 1590 aa18.61■□□□□ 0.57
NEO1-203ENST00000558485 NCAPD3P42695 1498 aa18.55■□□□□ 0.56
NEO1-203ENST00000558485 HMGXB3Q12766 1538 aa18.52■□□□□ 0.56
NEO1-203ENST00000558485 BAZ1BQ9UIG0 1483 aaKnown RBP18.49■□□□□ 0.55
NEO1-203ENST00000558485 SUPT5HO00267 1087 aaKnown RBP18.47■□□□□ 0.55
NEO1-203ENST00000558485 TOP2AP11388 1531 aaKnown RBP18.44■□□□□ 0.54
NEO1-203ENST00000558485 CCDC88BA6NC98 1476 aa18.22■□□□□ 0.51
NEO1-203ENST00000558485 NESP48681 1621 aa18.05■□□□□ 0.48
NEO1-203ENST00000558485 LAMC3Q9Y6N6 1575 aa18.03■□□□□ 0.48
NEO1-203ENST00000558485 CADPSQ9ULU8 1353 aa18.02■□□□□ 0.47
NEO1-203ENST00000558485 CFTRP13569 1480 aa18.01■□□□□ 0.47
NEO1-203ENST00000558485 PRDM2Q13029 1718 aa17.98■□□□□ 0.47
NEO1-203ENST00000558485 KIF21AQ7Z4S6 1674 aa17.87■□□□□ 0.45
NEO1-203ENST00000558485 PDS5BQ9NTI5 1447 aa17.84■□□□□ 0.45
NEO1-203ENST00000558485 FANCD2Q9BXW9 1451 aa17.83■□□□□ 0.45
NEO1-203ENST00000558485 ERCC6Q03468 1493 aa17.77■□□□□ 0.44
NEO1-203ENST00000558485 CEP164Q9UPV0 1460 aa17.77■□□□□ 0.44
NEO1-203ENST00000558485 THOC2Q8NI27 1593 aaKnown RBP17.71■□□□□ 0.43
NEO1-203ENST00000558485 ABCC8Q09428 1581 aa17.7■□□□□ 0.42
NEO1-203ENST00000558485 MRC2Q9UBG0 1479 aa17.68■□□□□ 0.42
NEO1-203ENST00000558485 URB2Q14146 1524 aaKnown RBP17.67■□□□□ 0.42
NEO1-203ENST00000558485 CUX1P39880 1505 aa17.63■□□□□ 0.41
NEO1-203ENST00000558485 WDR62O43379 1518 aa17.62■□□□□ 0.41
NEO1-203ENST00000558485 DNMBPQ6XZF7 1577 aa17.62■□□□□ 0.41
NEO1-203ENST00000558485 SYNJ1O43426 1573 aa17.62■□□□□ 0.41
NEO1-203ENST00000558485 WRNQ14191 1432 aaPredicted RBP eCLIP17.61■□□□□ 0.41
NEO1-203ENST00000558485 TOPBP1Q92547 1522 aa17.61■□□□□ 0.41
NEO1-203ENST00000558485 BIVM-ERCC5R4GMW8 1640 aa17.59■□□□□ 0.41
NEO1-203ENST00000558485 TOP2BQ02880 1626 aa17.57■□□□□ 0.4
NEO1-203ENST00000558485 FGD5Q6ZNL6 1462 aa17.5■□□□□ 0.39
NEO1-203ENST00000558485 CHIC1Q5VXU3 224 aa17.48■□□□□ 0.39
NEO1-203ENST00000558485 POLA1P09884 1462 aaPredicted RBP17.48■□□□□ 0.39
NEO1-203ENST00000558485 CUX2O14529 1486 aa17.46■□□□□ 0.39
NEO1-203ENST00000558485 TARBP1Q13395 1621 aaKnown RBP17.42■□□□□ 0.38
NEO1-203ENST00000558485 RAD54L2Q9Y4B4 1467 aa17.41■□□□□ 0.38
NEO1-203ENST00000558485 TRIM41Q8WV44 630 aa17.4■□□□□ 0.38
NEO1-203ENST00000558485 WDR97A6NE52 1622 aa17.39■□□□□ 0.38
NEO1-203ENST00000558485 SOGA1O94964 1423 aa17.38■□□□□ 0.37
NEO1-203ENST00000558485 IFT140Q96RY7 1462 aa17.37■□□□□ 0.37
NEO1-203ENST00000558485 ABCA10Q8WWZ4 1543 aa17.33■□□□□ 0.37
NEO1-203ENST00000558485 ZNF608Q9ULD9 1512 aaPredicted RBP17.31■□□□□ 0.36
NEO1-203ENST00000558485 EIF4G3O43432 1585 aaKnown RBP17.28■□□□□ 0.36
NEO1-203ENST00000558485 ABCA5Q8WWZ7 1642 aa17.27■□□□□ 0.36
NEO1-203ENST00000558485 TDRD9Q8NDG6 1382 aaKnown RBP17.25■□□□□ 0.35
NEO1-203ENST00000558485 AQRO60306 1485 aaKnown RBP eCLIP17.24■□□□□ 0.35
NEO1-203ENST00000558485 RUSC2Q8N2Y8 1516 aa17.23■□□□□ 0.35
NEO1-203ENST00000558485 PBRM1Q86U86 1689 aa17.21■□□□□ 0.35
NEO1-203ENST00000558485 GAPVD1Q14C86 1478 aa17.2■□□□□ 0.34
NEO1-203ENST00000558485 KIF27Q86VH2 1401 aa17.19■□□□□ 0.34
NEO1-203ENST00000558485 GRIN2BQ13224 1484 aa17.14■□□□□ 0.33
NEO1-203ENST00000558485 ERICH3Q5RHP9 1530 aa17.13■□□□□ 0.33
NEO1-203ENST00000558485 IGF1RP08069 1367 aa17.1■□□□□ 0.33
NEO1-203ENST00000558485 EEA1Q15075 1411 aa17.1■□□□□ 0.33
NEO1-203ENST00000558485 SNAPC4Q5SXM2 1469 aa17.1■□□□□ 0.33
NEO1-203ENST00000558485 FAM9AQ8IZU1 332 aaPredicted RBP17.08■□□□□ 0.32
NEO1-203ENST00000558485 ADAMTS12P58397 1594 aa17.07■□□□□ 0.32
NEO1-203ENST00000558485 CUL7Q14999 1698 aa17.07■□□□□ 0.32
NEO1-203ENST00000558485 MAGI1Q96QZ7 1491 aaPredicted RBP17.05■□□□□ 0.32
NEO1-203ENST00000558485 CSRNP3Q8WYN3 585 aa17.02■□□□□ 0.32
NEO1-203ENST00000558485 FHAD1B1AJZ9 1412 aa17.01■□□□□ 0.31
NEO1-203ENST00000558485 CHD1O14646 1710 aa17.01■□□□□ 0.31
NEO1-203ENST00000558485 SYNJ2O15056 1496 aa16.99■□□□□ 0.31
NEO1-203ENST00000558485 PRXQ9BXM0 1461 aa16.99■□□□□ 0.31
NEO1-203ENST00000558485 CARMIL1Q5VZK9 1371 aa16.99■□□□□ 0.31
NEO1-203ENST00000558485 KIF21BO75037 1637 aa16.96■□□□□ 0.31
NEO1-203ENST00000558485 GRIN2AQ12879 1464 aa16.94■□□□□ 0.3
NEO1-203ENST00000558485 RAPGEF2Q9Y4G8 1499 aa16.94■□□□□ 0.3
NEO1-203ENST00000558485 CHMP7Q8WUX9 453 aaPredicted RBP16.91■□□□□ 0.3
NEO1-203ENST00000558485 FBLN2P98095 1184 aa16.9■□□□□ 0.3
NEO1-203ENST00000558485 CEP170Q5SW79 1584 aa16.88■□□□□ 0.29
NEO1-203ENST00000558485 NUP160Q12769 1436 aa16.85■□□□□ 0.29
NEO1-203ENST00000558485 GOLGA3Q08378 1498 aa16.85■□□□□ 0.29
NEO1-203ENST00000558485 EHMT2Q96KQ7 1210 aa16.84■□□□□ 0.29
NEO1-203ENST00000558485 CTTNBP2Q8WZ74 1663 aa16.84■□□□□ 0.29
NEO1-203ENST00000558485 CLASP1Q7Z460 1538 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms