RNA–Protein interactions for RNA: ENST00000558450.5

CPNE6-206, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-206ENST00000558450 NISCHQ9Y2I1 1504 aa35.44■■■■□ 3.26
CPNE6-206ENST00000558450 ABCC9O60706 1549 aa32.48■■■□□ 2.79
CPNE6-206ENST00000558450 CCDC180Q9P1Z9 1646 aa32.05■■■□□ 2.72
CPNE6-206ENST00000558450 DNAJC5BQ9UF47 199 aa30.81■■■□□ 2.52
CPNE6-206ENST00000558450 RB1CC1Q8TDY2 1594 aa30.75■■■□□ 2.51
CPNE6-206ENST00000558450 NACADO15069 1562 aa30.41■■■□□ 2.46
CPNE6-206ENST00000558450 PABPN1Q86U42 306 aaKnown RBP eCLIP30.13■■■□□ 2.41
CPNE6-206ENST00000558450 DCAF8L2P0C7V8 631 aa30.11■■■□□ 2.41
CPNE6-206ENST00000558450 UNC13AQ9UPW8 1703 aa29.99■■■□□ 2.39
CPNE6-206ENST00000558450 MYO15BQ96JP2 1530 aa29.84■■■□□ 2.37
CPNE6-206ENST00000558450 BICRAQ9NZM4 1560 aa29.81■■■□□ 2.36
CPNE6-206ENST00000558450 SHROOM4Q9ULL8 1493 aa29.46■■■□□ 2.31
CPNE6-206ENST00000558450 CECR2Q9BXF3 1484 aa29.33■■■□□ 2.29
CPNE6-206ENST00000558450 CC2D2AQ9P2K1 1620 aa29.32■■■□□ 2.28
CPNE6-206ENST00000558450 ZCCHC6Q5VYS8 1495 aaKnown RBP29.29■■■□□ 2.28
CPNE6-206ENST00000558450 DCAF1Q9Y4B6 1507 aa29.27■■■□□ 2.28
CPNE6-206ENST00000558450 EIF4G1Q04637 1599 aaKnown RBP29.15■■■□□ 2.26
CPNE6-206ENST00000558450 SCRIBQ14160 1630 aa29.15■■■□□ 2.26
CPNE6-206ENST00000558450 DNAJC5Q9H3Z4 198 aa28.7■■■□□ 2.18
CPNE6-206ENST00000558450 CUX2O14529 1486 aa28.23■■■□□ 2.11
CPNE6-206ENST00000558450 ERCC6Q03468 1493 aa28.13■■■□□ 2.09
CPNE6-206ENST00000558450 NCAPD3P42695 1498 aa28.06■■■□□ 2.08
CPNE6-206ENST00000558450 ATAD2BQ9ULI0 1458 aa27.9■■■□□ 2.06
CPNE6-206ENST00000558450 HMGXB3Q12766 1538 aa27.84■■■□□ 2.05
CPNE6-206ENST00000558450 SMARCA2P51531 1590 aa27.84■■■□□ 2.05
CPNE6-206ENST00000558450 SMARCA4P51532 1647 aa27.77■■■□□ 2.04
CPNE6-206ENST00000558450 NESP48681 1621 aa27.74■■■□□ 2.03
CPNE6-206ENST00000558450 BAZ1BQ9UIG0 1483 aaKnown RBP27.64■■■□□ 2.02
CPNE6-206ENST00000558450 THOC2Q8NI27 1593 aaKnown RBP27.6■■■□□ 2.01
CPNE6-206ENST00000558450 BAZ1AQ9NRL2 1556 aaPredicted RBP27.57■■■□□ 2
CPNE6-206ENST00000558450 LAMC3Q9Y6N6 1575 aa27.52■■■□□ 2
CPNE6-206ENST00000558450 PEG3Q9GZU2 1588 aa27.5■■□□□ 1.99
CPNE6-206ENST00000558450 PDS5BQ9NTI5 1447 aa27.4■■□□□ 1.98
CPNE6-206ENST00000558450 KIF21AQ7Z4S6 1674 aa27.4■■□□□ 1.98
CPNE6-206ENST00000558450 MROH2BQ7Z745 1585 aa27.28■■□□□ 1.96
CPNE6-206ENST00000558450 TRIM41Q8WV44 630 aa27.27■■□□□ 1.96
CPNE6-206ENST00000558450 CADPSQ9ULU8 1353 aa27.18■■□□□ 1.94
CPNE6-206ENST00000558450 MRC2Q9UBG0 1479 aa27.18■■□□□ 1.94
CPNE6-206ENST00000558450 WDR62O43379 1518 aa27.12■■□□□ 1.93
CPNE6-206ENST00000558450 CEP164Q9UPV0 1460 aa26.99■■□□□ 1.91
CPNE6-206ENST00000558450 WIZO95785 1651 aa26.93■■□□□ 1.9
CPNE6-206ENST00000558450 FANCD2Q9BXW9 1451 aa26.89■■□□□ 1.9
CPNE6-206ENST00000558450 OSCARQ8IYS5 282 aa26.83■■□□□ 1.89
CPNE6-206ENST00000558450 CFTRP13569 1480 aa26.78■■□□□ 1.88
CPNE6-206ENST00000558450 URB2Q14146 1524 aaKnown RBP26.67■■□□□ 1.86
CPNE6-206ENST00000558450 TOP2AP11388 1531 aaKnown RBP26.6■■□□□ 1.85
CPNE6-206ENST00000558450 RSF1Q96T23 1441 aaPredicted RBP26.55■■□□□ 1.84
CPNE6-206ENST00000558450 RIMBP3CA6NJZ7 1639 aa26.54■■□□□ 1.84
CPNE6-206ENST00000558450 RIMBP3BA6NNM3 1639 aa26.54■■□□□ 1.84
CPNE6-206ENST00000558450 RIMBP3Q9UFD9 1639 aa26.54■■□□□ 1.84
CPNE6-206ENST00000558450 PRDM2Q13029 1718 aa26.49■■□□□ 1.83
CPNE6-206ENST00000558450 IFT140Q96RY7 1462 aa26.46■■□□□ 1.83
CPNE6-206ENST00000558450 ARHGEF11O15085 1522 aa26.42■■□□□ 1.82
CPNE6-206ENST00000558450 ZNF608Q9ULD9 1512 aaPredicted RBP26.42■■□□□ 1.82
CPNE6-206ENST00000558450 TOPBP1Q92547 1522 aa26.32■■□□□ 1.8
CPNE6-206ENST00000558450 EIF4G3O43432 1585 aaKnown RBP26.29■■□□□ 1.8
CPNE6-206ENST00000558450 CCDC88BA6NC98 1476 aa26.27■■□□□ 1.8
CPNE6-206ENST00000558450 ABCC8Q09428 1581 aa26.27■■□□□ 1.8
CPNE6-206ENST00000558450 CYB5RLQ6IPT4 315 aa26.22■■□□□ 1.79
CPNE6-206ENST00000558450 DNMBPQ6XZF7 1577 aa26.2■■□□□ 1.78
CPNE6-206ENST00000558450 CHD1O14646 1710 aa26.17■■□□□ 1.78
CPNE6-206ENST00000558450 AQRO60306 1485 aaKnown RBP eCLIP26.11■■□□□ 1.77
CPNE6-206ENST00000558450 TARBP1Q13395 1621 aaKnown RBP26.11■■□□□ 1.77
CPNE6-206ENST00000558450 TRHP20396 242 aaPredicted RBP26.11■■□□□ 1.77
CPNE6-206ENST00000558450 ARAP1Q96P48 1450 aa26.11■■□□□ 1.77
CPNE6-206ENST00000558450 FBLN2P98095 1184 aa26.06■■□□□ 1.76
CPNE6-206ENST00000558450 POLA1P09884 1462 aaPredicted RBP26.02■■□□□ 1.76
CPNE6-206ENST00000558450 RAD54L2Q9Y4B4 1467 aa25.91■■□□□ 1.74
CPNE6-206ENST00000558450 TDRD9Q8NDG6 1382 aaKnown RBP25.88■■□□□ 1.73
CPNE6-206ENST00000558450 SOGA1O94964 1423 aa25.88■■□□□ 1.73
CPNE6-206ENST00000558450 WDR97A6NE52 1622 aa25.87■■□□□ 1.73
CPNE6-206ENST00000558450 SNAPC4Q5SXM2 1469 aa25.86■■□□□ 1.73
CPNE6-206ENST00000558450 CLASP1Q7Z460 1538 aa25.85■■□□□ 1.73
CPNE6-206ENST00000558450 SYNJ1O43426 1573 aa25.83■■□□□ 1.73
CPNE6-206ENST00000558450 CHMP7Q8WUX9 453 aaPredicted RBP25.8■■□□□ 1.72
CPNE6-206ENST00000558450 MAGI1Q96QZ7 1491 aaPredicted RBP25.79■■□□□ 1.72
CPNE6-206ENST00000558450 FGD5Q6ZNL6 1462 aa25.79■■□□□ 1.72
CPNE6-206ENST00000558450 GRIN2BQ13224 1484 aa25.74■■□□□ 1.71
CPNE6-206ENST00000558450 AEBP2Q6ZN18 517 aaPredicted RBP25.73■■□□□ 1.71
CPNE6-206ENST00000558450 SYNJ2O15056 1496 aa25.72■■□□□ 1.71
CPNE6-206ENST00000558450 CUX1P39880 1505 aa25.68■■□□□ 1.7
CPNE6-206ENST00000558450 GAPVD1Q14C86 1478 aa25.63■■□□□ 1.69
CPNE6-206ENST00000558450 PBRM1Q86U86 1689 aa25.6■■□□□ 1.69
CPNE6-206ENST00000558450 ABCA5Q8WWZ7 1642 aa25.48■■□□□ 1.67
CPNE6-206ENST00000558450 ABCA10Q8WWZ4 1543 aa25.47■■□□□ 1.67
CPNE6-206ENST00000558450 GRIN2AQ12879 1464 aa25.4■■□□□ 1.66
CPNE6-206ENST00000558450 ERCC6L2Q5T890 1561 aa25.38■■□□□ 1.65
CPNE6-206ENST00000558450 CEP170Q5SW79 1584 aa25.35■■□□□ 1.65
CPNE6-206ENST00000558450 ADAMTS12P58397 1594 aa25.34■■□□□ 1.65
CPNE6-206ENST00000558450 NUP160Q12769 1436 aa25.33■■□□□ 1.65
CPNE6-206ENST00000558450 WRNQ14191 1432 aaPredicted RBP eCLIP25.29■■□□□ 1.64
CPNE6-206ENST00000558450 SHROOM2Q13796 1616 aa25.26■■□□□ 1.63
CPNE6-206ENST00000558450 FHAD1B1AJZ9 1412 aa25.24■■□□□ 1.63
CPNE6-206ENST00000558450 KIF13AQ9H1H9 1805 aa25.19■■□□□ 1.62
CPNE6-206ENST00000558450 BIVM-ERCC5R4GMW8 1640 aa25.16■■□□□ 1.62
CPNE6-206ENST00000558450 ERICH3Q5RHP9 1530 aa25.16■■□□□ 1.62
CPNE6-206ENST00000558450 TOP2BQ02880 1626 aa25.15■■□□□ 1.62
CPNE6-206ENST00000558450 PRG4Q92954 1404 aaPredicted RBP25.12■■□□□ 1.61
CPNE6-206ENST00000558450 JPH4Q96JJ6 628 aa25.04■■□□□ 1.6
CPNE6-206ENST00000558450 ABCC10Q5T3U5 1492 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms