RNA–Protein interactions for RNA: ENST00000558415.5

SPG21-206, Transcript of SPG21, maspardin, humanhuman

TSL 3

Gene SPG21, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-206ENST00000558415 NISCHQ9Y2I1 1504 aa35.43■■■■□ 3.26
SPG21-206ENST00000558415 CCDC180Q9P1Z9 1646 aa31.65■■■□□ 2.66
SPG21-206ENST00000558415 ABCC9O60706 1549 aa31.25■■■□□ 2.59
SPG21-206ENST00000558415 RB1CC1Q8TDY2 1594 aa29.9■■■□□ 2.38
SPG21-206ENST00000558415 NACADO15069 1562 aa29.79■■■□□ 2.36
SPG21-206ENST00000558415 DCAF8L2P0C7V8 631 aa29.68■■■□□ 2.34
SPG21-206ENST00000558415 MYO15BQ96JP2 1530 aa29.5■■■□□ 2.31
SPG21-206ENST00000558415 ZCCHC6Q5VYS8 1495 aaKnown RBP29.47■■■□□ 2.31
SPG21-206ENST00000558415 UNC13AQ9UPW8 1703 aa29.32■■■□□ 2.28
SPG21-206ENST00000558415 DCAF1Q9Y4B6 1507 aa29.27■■■□□ 2.28
SPG21-206ENST00000558415 PABPN1Q86U42 306 aaKnown RBP eCLIP29.13■■■□□ 2.25
SPG21-206ENST00000558415 BICRAQ9NZM4 1560 aa29.06■■■□□ 2.24
SPG21-206ENST00000558415 DNAJC5BQ9UF47 199 aa28.95■■■□□ 2.22
SPG21-206ENST00000558415 SCRIBQ14160 1630 aa28.88■■■□□ 2.21
SPG21-206ENST00000558415 SHROOM4Q9ULL8 1493 aa28.65■■■□□ 2.18
SPG21-206ENST00000558415 EIF4G1Q04637 1599 aaKnown RBP28.3■■■□□ 2.12
SPG21-206ENST00000558415 CC2D2AQ9P2K1 1620 aa28.27■■■□□ 2.12
SPG21-206ENST00000558415 CECR2Q9BXF3 1484 aa28.09■■■□□ 2.09
SPG21-206ENST00000558415 SMARCA4P51532 1647 aa27.59■■■□□ 2.01
SPG21-206ENST00000558415 NCAPD3P42695 1498 aa27.49■■□□□ 1.99
SPG21-206ENST00000558415 ATAD2BQ9ULI0 1458 aa27.48■■□□□ 1.99
SPG21-206ENST00000558415 BAZ1AQ9NRL2 1556 aaPredicted RBP27.47■■□□□ 1.99
SPG21-206ENST00000558415 SMARCA2P51531 1590 aa27.41■■□□□ 1.98
SPG21-206ENST00000558415 HMGXB3Q12766 1538 aa27.35■■□□□ 1.97
SPG21-206ENST00000558415 MROH2BQ7Z745 1585 aa27.32■■□□□ 1.96
SPG21-206ENST00000558415 PEG3Q9GZU2 1588 aa27.3■■□□□ 1.96
SPG21-206ENST00000558415 BAZ1BQ9UIG0 1483 aaKnown RBP27.24■■□□□ 1.95
SPG21-206ENST00000558415 WIZO95785 1651 aa27.04■■□□□ 1.92
SPG21-206ENST00000558415 NESP48681 1621 aa26.98■■□□□ 1.91
SPG21-206ENST00000558415 ERCC6Q03468 1493 aa26.93■■□□□ 1.9
SPG21-206ENST00000558415 RSF1Q96T23 1441 aaPredicted RBP26.88■■□□□ 1.89
SPG21-206ENST00000558415 LAMC3Q9Y6N6 1575 aa26.82■■□□□ 1.88
SPG21-206ENST00000558415 CUX2O14529 1486 aa26.74■■□□□ 1.87
SPG21-206ENST00000558415 TOP2AP11388 1531 aaKnown RBP26.7■■□□□ 1.86
SPG21-206ENST00000558415 KIF21AQ7Z4S6 1674 aa26.68■■□□□ 1.86
SPG21-206ENST00000558415 CADPSQ9ULU8 1353 aa26.66■■□□□ 1.86
SPG21-206ENST00000558415 THOC2Q8NI27 1593 aaKnown RBP26.65■■□□□ 1.86
SPG21-206ENST00000558415 PDS5BQ9NTI5 1447 aa26.61■■□□□ 1.85
SPG21-206ENST00000558415 CFTRP13569 1480 aa26.46■■□□□ 1.83
SPG21-206ENST00000558415 MRC2Q9UBG0 1479 aa26.4■■□□□ 1.82
SPG21-206ENST00000558415 CCDC88BA6NC98 1476 aa26.38■■□□□ 1.81
SPG21-206ENST00000558415 FANCD2Q9BXW9 1451 aa26.38■■□□□ 1.81
SPG21-206ENST00000558415 CEP164Q9UPV0 1460 aa26.37■■□□□ 1.81
SPG21-206ENST00000558415 WDR62O43379 1518 aa26.34■■□□□ 1.81
SPG21-206ENST00000558415 PRDM2Q13029 1718 aa26.3■■□□□ 1.8
SPG21-206ENST00000558415 DNAJC5Q9H3Z4 198 aa26.25■■□□□ 1.79
SPG21-206ENST00000558415 URB2Q14146 1524 aaKnown RBP26.17■■□□□ 1.78
SPG21-206ENST00000558415 SUPT5HO00267 1087 aaKnown RBP25.96■■□□□ 1.75
SPG21-206ENST00000558415 TOPBP1Q92547 1522 aa25.94■■□□□ 1.74
SPG21-206ENST00000558415 DNMBPQ6XZF7 1577 aa25.89■■□□□ 1.73
SPG21-206ENST00000558415 ABCC8Q09428 1581 aa25.86■■□□□ 1.73
SPG21-206ENST00000558415 IFT140Q96RY7 1462 aa25.82■■□□□ 1.72
SPG21-206ENST00000558415 ZNF608Q9ULD9 1512 aaPredicted RBP25.78■■□□□ 1.72
SPG21-206ENST00000558415 TARBP1Q13395 1621 aaKnown RBP25.7■■□□□ 1.71
SPG21-206ENST00000558415 POLA1P09884 1462 aaPredicted RBP25.7■■□□□ 1.7
SPG21-206ENST00000558415 EIF4G3O43432 1585 aaKnown RBP25.68■■□□□ 1.7
SPG21-206ENST00000558415 CUX1P39880 1505 aa25.65■■□□□ 1.7
SPG21-206ENST00000558415 RAD54L2Q9Y4B4 1467 aa25.61■■□□□ 1.69
SPG21-206ENST00000558415 FGD5Q6ZNL6 1462 aa25.6■■□□□ 1.69
SPG21-206ENST00000558415 AQRO60306 1485 aaKnown RBP eCLIP25.58■■□□□ 1.69
SPG21-206ENST00000558415 SOGA1O94964 1423 aa25.55■■□□□ 1.68
SPG21-206ENST00000558415 OSCARQ8IYS5 282 aa25.54■■□□□ 1.68
SPG21-206ENST00000558415 TDRD9Q8NDG6 1382 aaKnown RBP25.47■■□□□ 1.67
SPG21-206ENST00000558415 WDR97A6NE52 1622 aa25.45■■□□□ 1.67
SPG21-206ENST00000558415 CHD1O14646 1710 aa25.43■■□□□ 1.66
SPG21-206ENST00000558415 BIVM-ERCC5R4GMW8 1640 aa25.36■■□□□ 1.65
SPG21-206ENST00000558415 SYNJ1O43426 1573 aa25.35■■□□□ 1.65
SPG21-206ENST00000558415 TOP2BQ02880 1626 aa25.34■■□□□ 1.65
SPG21-206ENST00000558415 WRNQ14191 1432 aaPredicted RBP eCLIP25.34■■□□□ 1.65
SPG21-206ENST00000558415 SNAPC4Q5SXM2 1469 aa25.34■■□□□ 1.65
SPG21-206ENST00000558415 ABCA10Q8WWZ4 1543 aa25.32■■□□□ 1.64
SPG21-206ENST00000558415 PBRM1Q86U86 1689 aa25.3■■□□□ 1.64
SPG21-206ENST00000558415 GRIN2BQ13224 1484 aa25.29■■□□□ 1.64
SPG21-206ENST00000558415 TRIM41Q8WV44 630 aa25.29■■□□□ 1.64
SPG21-206ENST00000558415 ABCA5Q8WWZ7 1642 aa25.28■■□□□ 1.64
SPG21-206ENST00000558415 FBLN2P98095 1184 aa25.28■■□□□ 1.64
SPG21-206ENST00000558415 GAPVD1Q14C86 1478 aa25.27■■□□□ 1.64
SPG21-206ENST00000558415 MAGI1Q96QZ7 1491 aaPredicted RBP25.26■■□□□ 1.63
SPG21-206ENST00000558415 RIMBP3CA6NJZ7 1639 aa25.26■■□□□ 1.63
SPG21-206ENST00000558415 RIMBP3BA6NNM3 1639 aa25.26■■□□□ 1.63
SPG21-206ENST00000558415 RIMBP3Q9UFD9 1639 aa25.26■■□□□ 1.63
SPG21-206ENST00000558415 ARHGEF11O15085 1522 aa25.21■■□□□ 1.63
SPG21-206ENST00000558415 SYNJ2O15056 1496 aa25.18■■□□□ 1.62
SPG21-206ENST00000558415 CHMP7Q8WUX9 453 aaPredicted RBP25.15■■□□□ 1.62
SPG21-206ENST00000558415 CLASP1Q7Z460 1538 aa25.12■■□□□ 1.61
SPG21-206ENST00000558415 ADAMTS12P58397 1594 aa25.06■■□□□ 1.6
SPG21-206ENST00000558415 ERICH3Q5RHP9 1530 aa25.01■■□□□ 1.59
SPG21-206ENST00000558415 GRIN2AQ12879 1464 aa24.99■■□□□ 1.59
SPG21-206ENST00000558415 ARAP1Q96P48 1450 aa24.99■■□□□ 1.59
SPG21-206ENST00000558415 FHAD1B1AJZ9 1412 aa24.95■■□□□ 1.59
SPG21-206ENST00000558415 CYB5RLQ6IPT4 315 aa24.94■■□□□ 1.58
SPG21-206ENST00000558415 CEP170Q5SW79 1584 aa24.92■■□□□ 1.58
SPG21-206ENST00000558415 NUP160Q12769 1436 aa24.89■■□□□ 1.58
SPG21-206ENST00000558415 KIF27Q86VH2 1401 aa24.81■■□□□ 1.56
SPG21-206ENST00000558415 ERCC6L2Q5T890 1561 aa24.78■■□□□ 1.56
SPG21-206ENST00000558415 SHROOM2Q13796 1616 aa24.77■■□□□ 1.56
SPG21-206ENST00000558415 IGF1RP08069 1367 aa24.77■■□□□ 1.56
SPG21-206ENST00000558415 CUL7Q14999 1698 aa24.74■■□□□ 1.55
SPG21-206ENST00000558415 RUSC2Q8N2Y8 1516 aa24.71■■□□□ 1.55
SPG21-206ENST00000558415 PRG4Q92954 1404 aaPredicted RBP24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms