RNA–Protein interactions for RNA: ENST00000558380.1

PIF1-203, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 3

Gene PIF1, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-203ENST00000558380 NISCHQ9Y2I1 1504 aa38.75■■■■□ 3.79
PIF1-203ENST00000558380 CCDC180Q9P1Z9 1646 aa34.64■■■■□ 3.14
PIF1-203ENST00000558380 ABCC9O60706 1549 aa34.13■■■■□ 3.05
PIF1-203ENST00000558380 RB1CC1Q8TDY2 1594 aa32.75■■■□□ 2.83
PIF1-203ENST00000558380 NACADO15069 1562 aa32.65■■■□□ 2.82
PIF1-203ENST00000558380 MYO15BQ96JP2 1530 aa32.41■■■□□ 2.78
PIF1-203ENST00000558380 DCAF8L2P0C7V8 631 aa32.3■■■□□ 2.76
PIF1-203ENST00000558380 ZCCHC6Q5VYS8 1495 aaKnown RBP32.23■■■□□ 2.75
PIF1-203ENST00000558380 DCAF1Q9Y4B6 1507 aa32.12■■■□□ 2.73
PIF1-203ENST00000558380 UNC13AQ9UPW8 1703 aa31.95■■■□□ 2.71
PIF1-203ENST00000558380 BICRAQ9NZM4 1560 aa31.79■■■□□ 2.68
PIF1-203ENST00000558380 PABPN1Q86U42 306 aaKnown RBP eCLIP31.78■■■□□ 2.68
PIF1-203ENST00000558380 DNAJC5BQ9UF47 199 aa31.65■■■□□ 2.66
PIF1-203ENST00000558380 SHROOM4Q9ULL8 1493 aa31.51■■■□□ 2.63
PIF1-203ENST00000558380 SCRIBQ14160 1630 aa31.48■■■□□ 2.63
PIF1-203ENST00000558380 EIF4G1Q04637 1599 aaKnown RBP30.96■■■□□ 2.55
PIF1-203ENST00000558380 CC2D2AQ9P2K1 1620 aa30.9■■■□□ 2.54
PIF1-203ENST00000558380 CECR2Q9BXF3 1484 aa30.74■■■□□ 2.51
PIF1-203ENST00000558380 SMARCA4P51532 1647 aa30.14■■■□□ 2.41
PIF1-203ENST00000558380 NCAPD3P42695 1498 aa30.13■■■□□ 2.41
PIF1-203ENST00000558380 ATAD2BQ9ULI0 1458 aa30.07■■■□□ 2.4
PIF1-203ENST00000558380 BAZ1AQ9NRL2 1556 aaPredicted RBP30.06■■■□□ 2.4
PIF1-203ENST00000558380 SMARCA2P51531 1590 aa30.02■■■□□ 2.4
PIF1-203ENST00000558380 HMGXB3Q12766 1538 aa29.97■■■□□ 2.39
PIF1-203ENST00000558380 PEG3Q9GZU2 1588 aa29.92■■■□□ 2.38
PIF1-203ENST00000558380 MROH2BQ7Z745 1585 aa29.83■■■□□ 2.37
PIF1-203ENST00000558380 BAZ1BQ9UIG0 1483 aaKnown RBP29.78■■■□□ 2.36
PIF1-203ENST00000558380 WIZO95785 1651 aa29.46■■■□□ 2.31
PIF1-203ENST00000558380 ERCC6Q03468 1493 aa29.44■■■□□ 2.3
PIF1-203ENST00000558380 NESP48681 1621 aa29.44■■■□□ 2.3
PIF1-203ENST00000558380 LAMC3Q9Y6N6 1575 aa29.39■■■□□ 2.29
PIF1-203ENST00000558380 RSF1Q96T23 1441 aaPredicted RBP29.37■■■□□ 2.29
PIF1-203ENST00000558380 CUX2O14529 1486 aa29.36■■■□□ 2.29
PIF1-203ENST00000558380 CADPSQ9ULU8 1353 aa29.2■■■□□ 2.26
PIF1-203ENST00000558380 TOP2AP11388 1531 aaKnown RBP29.19■■■□□ 2.26
PIF1-203ENST00000558380 PDS5BQ9NTI5 1447 aa29.17■■■□□ 2.26
PIF1-203ENST00000558380 THOC2Q8NI27 1593 aaKnown RBP29.15■■■□□ 2.26
PIF1-203ENST00000558380 KIF21AQ7Z4S6 1674 aa29.09■■■□□ 2.25
PIF1-203ENST00000558380 CFTRP13569 1480 aa28.98■■■□□ 2.23
PIF1-203ENST00000558380 MRC2Q9UBG0 1479 aa28.9■■■□□ 2.22
PIF1-203ENST00000558380 FANCD2Q9BXW9 1451 aa28.85■■■□□ 2.21
PIF1-203ENST00000558380 CEP164Q9UPV0 1460 aa28.85■■■□□ 2.21
PIF1-203ENST00000558380 WDR62O43379 1518 aa28.85■■■□□ 2.21
PIF1-203ENST00000558380 CCDC88BA6NC98 1476 aa28.81■■■□□ 2.2
PIF1-203ENST00000558380 DNAJC5Q9H3Z4 198 aa28.8■■■□□ 2.2
PIF1-203ENST00000558380 PRDM2Q13029 1718 aa28.69■■■□□ 2.18
PIF1-203ENST00000558380 URB2Q14146 1524 aaKnown RBP28.59■■■□□ 2.17
PIF1-203ENST00000558380 TOPBP1Q92547 1522 aa28.36■■■□□ 2.13
PIF1-203ENST00000558380 ABCC8Q09428 1581 aa28.36■■■□□ 2.13
PIF1-203ENST00000558380 DNMBPQ6XZF7 1577 aa28.31■■■□□ 2.12
PIF1-203ENST00000558380 IFT140Q96RY7 1462 aa28.28■■■□□ 2.12
PIF1-203ENST00000558380 SUPT5HO00267 1087 aaKnown RBP28.18■■■□□ 2.1
PIF1-203ENST00000558380 ZNF608Q9ULD9 1512 aaPredicted RBP28.15■■■□□ 2.1
PIF1-203ENST00000558380 TARBP1Q13395 1621 aaKnown RBP28.1■■■□□ 2.09
PIF1-203ENST00000558380 POLA1P09884 1462 aaPredicted RBP28.1■■■□□ 2.09
PIF1-203ENST00000558380 EIF4G3O43432 1585 aaKnown RBP28.05■■■□□ 2.08
PIF1-203ENST00000558380 CUX1P39880 1505 aa28.02■■■□□ 2.08
PIF1-203ENST00000558380 OSCARQ8IYS5 282 aa27.97■■■□□ 2.07
PIF1-203ENST00000558380 FGD5Q6ZNL6 1462 aa27.96■■■□□ 2.07
PIF1-203ENST00000558380 RAD54L2Q9Y4B4 1467 aa27.94■■■□□ 2.06
PIF1-203ENST00000558380 SOGA1O94964 1423 aa27.93■■■□□ 2.06
PIF1-203ENST00000558380 AQRO60306 1485 aaKnown RBP eCLIP27.93■■■□□ 2.061e-10■■■□□ 16.7
PIF1-203ENST00000558380 WDR97A6NE52 1622 aa27.92■■■□□ 2.06
PIF1-203ENST00000558380 TDRD9Q8NDG6 1382 aaKnown RBP27.8■■■□□ 2.04
PIF1-203ENST00000558380 ABCA10Q8WWZ4 1543 aa27.72■■■□□ 2.03
PIF1-203ENST00000558380 CHD1O14646 1710 aa27.71■■■□□ 2.03
PIF1-203ENST00000558380 BIVM-ERCC5R4GMW8 1640 aa27.7■■■□□ 2.03
PIF1-203ENST00000558380 TOP2BQ02880 1626 aa27.7■■■□□ 2.02
PIF1-203ENST00000558380 GRIN2BQ13224 1484 aa27.69■■■□□ 2.02
PIF1-203ENST00000558380 SNAPC4Q5SXM2 1469 aa27.69■■■□□ 2.02
PIF1-203ENST00000558380 WRNQ14191 1432 aaPredicted RBP eCLIP27.68■■■□□ 2.02
PIF1-203ENST00000558380 MAGI1Q96QZ7 1491 aaPredicted RBP27.68■■■□□ 2.02
PIF1-203ENST00000558380 SYNJ1O43426 1573 aa27.65■■■□□ 2.02
PIF1-203ENST00000558380 ABCA5Q8WWZ7 1642 aa27.64■■■□□ 2.02
PIF1-203ENST00000558380 GAPVD1Q14C86 1478 aa27.63■■■□□ 2.01
PIF1-203ENST00000558380 RIMBP3CA6NJZ7 1639 aa27.6■■■□□ 2.01
PIF1-203ENST00000558380 RIMBP3BA6NNM3 1639 aa27.6■■■□□ 2.01
PIF1-203ENST00000558380 RIMBP3Q9UFD9 1639 aa27.6■■■□□ 2.01
PIF1-203ENST00000558380 ARHGEF11O15085 1522 aa27.59■■■□□ 2.01
PIF1-203ENST00000558380 TRIM41Q8WV44 630 aa27.59■■■□□ 2.01
PIF1-203ENST00000558380 PBRM1Q86U86 1689 aa27.59■■■□□ 2.01
PIF1-203ENST00000558380 SYNJ2O15056 1496 aa27.57■■■□□ 2
PIF1-203ENST00000558380 FBLN2P98095 1184 aa27.56■■■□□ 2
PIF1-203ENST00000558380 CLASP1Q7Z460 1538 aa27.5■■□□□ 1.99
PIF1-203ENST00000558380 CHMP7Q8WUX9 453 aaPredicted RBP27.48■■□□□ 1.99
PIF1-203ENST00000558380 ADAMTS12P58397 1594 aa27.39■■□□□ 1.97
PIF1-203ENST00000558380 ERICH3Q5RHP9 1530 aa27.38■■□□□ 1.97
PIF1-203ENST00000558380 GRIN2AQ12879 1464 aa27.34■■□□□ 1.97
PIF1-203ENST00000558380 ARAP1Q96P48 1450 aa27.34■■□□□ 1.97
PIF1-203ENST00000558380 FHAD1B1AJZ9 1412 aa27.32■■□□□ 1.96
PIF1-203ENST00000558380 NUP160Q12769 1436 aa27.26■■□□□ 1.95
PIF1-203ENST00000558380 CYB5RLQ6IPT4 315 aa27.24■■□□□ 1.95
PIF1-203ENST00000558380 CEP170Q5SW79 1584 aa27.22■■□□□ 1.95
PIF1-203ENST00000558380 KIF27Q86VH2 1401 aa27.13■■□□□ 1.93
PIF1-203ENST00000558380 SHROOM2Q13796 1616 aa27.1■■□□□ 1.93
PIF1-203ENST00000558380 IGF1RP08069 1367 aa27.08■■□□□ 1.93
PIF1-203ENST00000558380 CUL7Q14999 1698 aa27.04■■□□□ 1.92
PIF1-203ENST00000558380 ERCC6L2Q5T890 1561 aa27.02■■□□□ 1.92
PIF1-203ENST00000558380 RUSC2Q8N2Y8 1516 aa27■■□□□ 1.91
PIF1-203ENST00000558380 PRG4Q92954 1404 aaPredicted RBP26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms