RNA–Protein interactions for RNA: ENST00000558339.1

SPG21-205, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-205ENST00000558339 NISCHQ9Y2I1 1504 aa55.55■■■■■ 6.48
SPG21-205ENST00000558339 ABCC9O60706 1549 aa49.9■■■■■ 5.58
SPG21-205ENST00000558339 CCDC180Q9P1Z9 1646 aa49.78■■■■■ 5.56
SPG21-205ENST00000558339 RB1CC1Q8TDY2 1594 aa47.41■■■■■ 5.18
SPG21-205ENST00000558339 NACADO15069 1562 aa47.1■■■■■ 5.13
SPG21-205ENST00000558339 DNAJC5BQ9UF47 199 aa46.91■■■■■ 5.1
SPG21-205ENST00000558339 DCAF8L2P0C7V8 631 aa46.84■■■■■ 5.09
SPG21-205ENST00000558339 PABPN1Q86U42 306 aaKnown RBP eCLIP46.47■■■■■ 5.03
SPG21-205ENST00000558339 MYO15BQ96JP2 1530 aa46.47■■■■■ 5.03
SPG21-205ENST00000558339 UNC13AQ9UPW8 1703 aa46.34■■■■■ 5.01
SPG21-205ENST00000558339 BICRAQ9NZM4 1560 aa46.13■■■■■ 4.97
SPG21-205ENST00000558339 ZCCHC6Q5VYS8 1495 aaKnown RBP46.05■■■■■ 4.96
SPG21-205ENST00000558339 DCAF1Q9Y4B6 1507 aa45.87■■■■■ 4.93
SPG21-205ENST00000558339 SHROOM4Q9ULL8 1493 aa45.42■■■■■ 4.86
SPG21-205ENST00000558339 SCRIBQ14160 1630 aa45.41■■■■■ 4.86
SPG21-205ENST00000558339 CC2D2AQ9P2K1 1620 aa45.04■■■■■ 4.8
SPG21-205ENST00000558339 EIF4G1Q04637 1599 aaKnown RBP44.96■■■■■ 4.79
SPG21-205ENST00000558339 CECR2Q9BXF3 1484 aa44.93■■■■■ 4.78
SPG21-205ENST00000558339 NCAPD3P42695 1498 aa43.53■■■■■ 4.56
SPG21-205ENST00000558339 ATAD2BQ9ULI0 1458 aa43.4■■■■■ 4.54
SPG21-205ENST00000558339 SMARCA4P51532 1647 aa43.32■■■■■ 4.53
SPG21-205ENST00000558339 SMARCA2P51531 1590 aa43.22■■■■■ 4.51
SPG21-205ENST00000558339 HMGXB3Q12766 1538 aa43.17■■■■■ 4.5
SPG21-205ENST00000558339 BAZ1AQ9NRL2 1556 aaPredicted RBP43.07■■■■■ 4.49
SPG21-205ENST00000558339 DNAJC5Q9H3Z4 198 aa43.03■■■■■ 4.48
SPG21-205ENST00000558339 ERCC6Q03468 1493 aa43.02■■■■■ 4.48
SPG21-205ENST00000558339 CUX2O14529 1486 aa42.98■■■■■ 4.47
SPG21-205ENST00000558339 BAZ1BQ9UIG0 1483 aaKnown RBP42.94■■■■■ 4.46
SPG21-205ENST00000558339 PEG3Q9GZU2 1588 aa42.91■■■■■ 4.46
SPG21-205ENST00000558339 NESP48681 1621 aa42.88■■■■■ 4.45
SPG21-205ENST00000558339 MROH2BQ7Z745 1585 aa42.82■■■■■ 4.45
SPG21-205ENST00000558339 LAMC3Q9Y6N6 1575 aa42.5■■■■■ 4.39
SPG21-205ENST00000558339 THOC2Q8NI27 1593 aaKnown RBP42.42■■■■■ 4.38
SPG21-205ENST00000558339 WIZO95785 1651 aa42.27■■■■■ 4.36
SPG21-205ENST00000558339 PDS5BQ9NTI5 1447 aa42.26■■■■■ 4.36
SPG21-205ENST00000558339 KIF21AQ7Z4S6 1674 aa42.25■■■■■ 4.35
SPG21-205ENST00000558339 CADPSQ9ULU8 1353 aa42.2■■■■■ 4.35
SPG21-205ENST00000558339 RSF1Q96T23 1441 aaPredicted RBP41.93■■■■■ 4.3
SPG21-205ENST00000558339 MRC2Q9UBG0 1479 aa41.92■■■■■ 4.3
SPG21-205ENST00000558339 WDR62O43379 1518 aa41.84■■■■■ 4.29
SPG21-205ENST00000558339 CEP164Q9UPV0 1460 aa41.74■■■■■ 4.27
SPG21-205ENST00000558339 TOP2AP11388 1531 aaKnown RBP41.74■■■■■ 4.27
SPG21-205ENST00000558339 CFTRP13569 1480 aa41.72■■■■■ 4.27
SPG21-205ENST00000558339 FANCD2Q9BXW9 1451 aa41.71■■■■■ 4.27
SPG21-205ENST00000558339 URB2Q14146 1524 aaKnown RBP41.4■■■■■ 4.22
SPG21-205ENST00000558339 CCDC88BA6NC98 1476 aa41.29■■■■■ 4.2
SPG21-205ENST00000558339 PRDM2Q13029 1718 aa41.18■■■■■ 4.18
SPG21-205ENST00000558339 TRIM41Q8WV44 630 aa41.1■■■■■ 4.17
SPG21-205ENST00000558339 OSCARQ8IYS5 282 aa41■■■■■ 4.15
SPG21-205ENST00000558339 TOPBP1Q92547 1522 aa40.93■■■■■ 4.14
SPG21-205ENST00000558339 IFT140Q96RY7 1462 aa40.91■■■■■ 4.14
SPG21-205ENST00000558339 ZNF608Q9ULD9 1512 aaPredicted RBP40.9■■■■■ 4.14
SPG21-205ENST00000558339 ABCC8Q09428 1581 aa40.78■■■■■ 4.12
SPG21-205ENST00000558339 DNMBPQ6XZF7 1577 aa40.75■■■■■ 4.11
SPG21-205ENST00000558339 EIF4G3O43432 1585 aaKnown RBP40.62■■■■■ 4.09
SPG21-205ENST00000558339 TARBP1Q13395 1621 aaKnown RBP40.57■■■■■ 4.09
SPG21-205ENST00000558339 AQRO60306 1485 aaKnown RBP eCLIP40.51■■■■■ 4.08
SPG21-205ENST00000558339 POLA1P09884 1462 aaPredicted RBP40.51■■■■■ 4.08
SPG21-205ENST00000558339 RIMBP3CA6NJZ7 1639 aa40.49■■■■■ 4.07
SPG21-205ENST00000558339 RIMBP3BA6NNM3 1639 aa40.49■■■■■ 4.07
SPG21-205ENST00000558339 RIMBP3Q9UFD9 1639 aa40.49■■■■■ 4.07
SPG21-205ENST00000558339 RAD54L2Q9Y4B4 1467 aa40.39■■■■■ 4.06
SPG21-205ENST00000558339 ARHGEF11O15085 1522 aa40.38■■■■■ 4.06
SPG21-205ENST00000558339 SOGA1O94964 1423 aa40.31■■■■■ 4.04
SPG21-205ENST00000558339 CHD1O14646 1710 aa40.29■■■■■ 4.04
SPG21-205ENST00000558339 TDRD9Q8NDG6 1382 aaKnown RBP40.26■■■■■ 4.04
SPG21-205ENST00000558339 FGD5Q6ZNL6 1462 aa40.25■■■■■ 4.03
SPG21-205ENST00000558339 CUX1P39880 1505 aa40.23■■■■■ 4.03
SPG21-205ENST00000558339 FBLN2P98095 1184 aa40.19■■■■■ 4.02
SPG21-205ENST00000558339 WDR97A6NE52 1622 aa40.09■■■■■ 4.01
SPG21-205ENST00000558339 SNAPC4Q5SXM2 1469 aa40.09■■■■■ 4.01
SPG21-205ENST00000558339 CYB5RLQ6IPT4 315 aa40.07■■■■■ 4.01
SPG21-205ENST00000558339 ARAP1Q96P48 1450 aa40.01■■■■■ 4
SPG21-205ENST00000558339 SUPT5HO00267 1087 aaKnown RBP40■■■■□ 3.99
SPG21-205ENST00000558339 GRIN2BQ13224 1484 aa39.95■■■■□ 3.99
SPG21-205ENST00000558339 MAGI1Q96QZ7 1491 aaPredicted RBP39.95■■■■□ 3.99
SPG21-205ENST00000558339 CLASP1Q7Z460 1538 aa39.91■■■■□ 3.98
SPG21-205ENST00000558339 CHMP7Q8WUX9 453 aaPredicted RBP39.89■■■■□ 3.98
SPG21-205ENST00000558339 SYNJ2O15056 1496 aa39.83■■■■□ 3.97
SPG21-205ENST00000558339 GAPVD1Q14C86 1478 aa39.81■■■■□ 3.96
SPG21-205ENST00000558339 SYNJ1O43426 1573 aa39.8■■■■□ 3.96
SPG21-205ENST00000558339 ABCA10Q8WWZ4 1543 aa39.79■■■■□ 3.96
SPG21-205ENST00000558339 PBRM1Q86U86 1689 aa39.76■■■■□ 3.96
SPG21-205ENST00000558339 ABCA5Q8WWZ7 1642 aa39.73■■■■□ 3.95
SPG21-205ENST00000558339 WRNQ14191 1432 aaPredicted RBP eCLIP39.59■■■■□ 3.93
SPG21-205ENST00000558339 TRHP20396 242 aaPredicted RBP39.59■■■■□ 3.93
SPG21-205ENST00000558339 TOP2BQ02880 1626 aa39.54■■■■□ 3.92
SPG21-205ENST00000558339 BIVM-ERCC5R4GMW8 1640 aa39.53■■■■□ 3.92
SPG21-205ENST00000558339 GRIN2AQ12879 1464 aa39.46■■■■□ 3.91
SPG21-205ENST00000558339 ADAMTS12P58397 1594 aa39.43■■■■□ 3.9
SPG21-205ENST00000558339 NUP160Q12769 1436 aa39.35■■■■□ 3.89
SPG21-205ENST00000558339 CEP170Q5SW79 1584 aa39.33■■■■□ 3.89
SPG21-205ENST00000558339 FHAD1B1AJZ9 1412 aa39.31■■■■□ 3.88
SPG21-205ENST00000558339 ERCC6L2Q5T890 1561 aa39.31■■■■□ 3.88
SPG21-205ENST00000558339 ERICH3Q5RHP9 1530 aa39.26■■■■□ 3.88
SPG21-205ENST00000558339 SHROOM2Q13796 1616 aa39.14■■■■□ 3.86
SPG21-205ENST00000558339 PRG4Q92954 1404 aaPredicted RBP38.95■■■■□ 3.83
SPG21-205ENST00000558339 JPH4Q96JJ6 628 aa38.92■■■■□ 3.82
SPG21-205ENST00000558339 RUSC2Q8N2Y8 1516 aa38.88■■■■□ 3.81
SPG21-205ENST00000558339 IGF1RP08069 1367 aa38.81■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms