RNA–Protein interactions for RNA: ENST00000558307.1

SPATA41-201, Transcript of spermatogenesis associated 41, humanhuman

TSL 5

Gene SPATA41, Length 1,252 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA41-201ENST00000558307 NISCHQ9Y2I1 1504 aa29.45■■■□□ 2.3
SPATA41-201ENST00000558307 CCDC180Q9P1Z9 1646 aa26.23■■□□□ 1.79
SPATA41-201ENST00000558307 ABCC9O60706 1549 aa26.17■■□□□ 1.78
SPATA41-201ENST00000558307 DCAF8L2P0C7V8 631 aa24.83■■□□□ 1.57
SPATA41-201ENST00000558307 RB1CC1Q8TDY2 1594 aa24.83■■□□□ 1.57
SPATA41-201ENST00000558307 NACADO15069 1562 aa24.69■■□□□ 1.54
SPATA41-201ENST00000558307 UNC13AQ9UPW8 1703 aa24.49■■□□□ 1.51
SPATA41-201ENST00000558307 ZCCHC6Q5VYS8 1495 aaKnown RBP24.49■■□□□ 1.51
SPATA41-201ENST00000558307 PABPN1Q86U42 306 aaKnown RBP eCLIP24.44■■□□□ 1.5
SPATA41-201ENST00000558307 DNAJC5BQ9UF47 199 aa24.37■■□□□ 1.49
SPATA41-201ENST00000558307 MYO15BQ96JP2 1530 aa24.35■■□□□ 1.49
SPATA41-201ENST00000558307 BICRAQ9NZM4 1560 aa24.27■■□□□ 1.48
SPATA41-201ENST00000558307 DCAF1Q9Y4B6 1507 aa24.2■■□□□ 1.46
SPATA41-201ENST00000558307 SCRIBQ14160 1630 aa24.14■■□□□ 1.46
SPATA41-201ENST00000558307 SHROOM4Q9ULL8 1493 aa23.62■■□□□ 1.37
SPATA41-201ENST00000558307 CC2D2AQ9P2K1 1620 aa23.59■■□□□ 1.37
SPATA41-201ENST00000558307 EIF4G1Q04637 1599 aaKnown RBP23.57■■□□□ 1.36
SPATA41-201ENST00000558307 CECR2Q9BXF3 1484 aa23.43■■□□□ 1.34
SPATA41-201ENST00000558307 SMARCA4P51532 1647 aa22.96■■□□□ 1.27
SPATA41-201ENST00000558307 ATAD2BQ9ULI0 1458 aa22.87■■□□□ 1.25
SPATA41-201ENST00000558307 MROH2BQ7Z745 1585 aa22.81■■□□□ 1.24
SPATA41-201ENST00000558307 NCAPD3P42695 1498 aa22.81■■□□□ 1.24
SPATA41-201ENST00000558307 BAZ1AQ9NRL2 1556 aaPredicted RBP22.77■■□□□ 1.24
SPATA41-201ENST00000558307 SMARCA2P51531 1590 aa22.73■■□□□ 1.23
SPATA41-201ENST00000558307 HMGXB3Q12766 1538 aa22.68■■□□□ 1.22
SPATA41-201ENST00000558307 BAZ1BQ9UIG0 1483 aaKnown RBP22.65■■□□□ 1.22
SPATA41-201ENST00000558307 NESP48681 1621 aa22.62■■□□□ 1.21
SPATA41-201ENST00000558307 PEG3Q9GZU2 1588 aa22.62■■□□□ 1.21
SPATA41-201ENST00000558307 WIZO95785 1651 aa22.58■■□□□ 1.21
SPATA41-201ENST00000558307 ERCC6Q03468 1493 aa22.45■■□□□ 1.18
SPATA41-201ENST00000558307 RSF1Q96T23 1441 aaPredicted RBP22.37■■□□□ 1.17
SPATA41-201ENST00000558307 KIF21AQ7Z4S6 1674 aa22.3■■□□□ 1.16
SPATA41-201ENST00000558307 LAMC3Q9Y6N6 1575 aa22.25■■□□□ 1.15
SPATA41-201ENST00000558307 THOC2Q8NI27 1593 aaKnown RBP22.25■■□□□ 1.15
SPATA41-201ENST00000558307 CUX2O14529 1486 aa22.22■■□□□ 1.15
SPATA41-201ENST00000558307 TOP2AP11388 1531 aaKnown RBP22.19■■□□□ 1.14
SPATA41-201ENST00000558307 CADPSQ9ULU8 1353 aa22.15■■□□□ 1.14
SPATA41-201ENST00000558307 PDS5BQ9NTI5 1447 aa22.07■■□□□ 1.12
SPATA41-201ENST00000558307 CCDC88BA6NC98 1476 aa21.98■■□□□ 1.11
SPATA41-201ENST00000558307 CFTRP13569 1480 aa21.97■■□□□ 1.11
SPATA41-201ENST00000558307 FANCD2Q9BXW9 1451 aa21.97■■□□□ 1.11
SPATA41-201ENST00000558307 MRC2Q9UBG0 1479 aa21.97■■□□□ 1.11
SPATA41-201ENST00000558307 DNAJC5Q9H3Z4 198 aa21.94■■□□□ 1.1
SPATA41-201ENST00000558307 CEP164Q9UPV0 1460 aa21.94■■□□□ 1.1
SPATA41-201ENST00000558307 WDR62O43379 1518 aa21.91■■□□□ 1.1
SPATA41-201ENST00000558307 URB2Q14146 1524 aaKnown RBP21.85■■□□□ 1.09
SPATA41-201ENST00000558307 PRDM2Q13029 1718 aa21.83■■□□□ 1.08
SPATA41-201ENST00000558307 SUPT5HO00267 1087 aaKnown RBP21.69■■□□□ 1.06
SPATA41-201ENST00000558307 TOPBP1Q92547 1522 aa21.61■■□□□ 1.05
SPATA41-201ENST00000558307 ZNF608Q9ULD9 1512 aaPredicted RBP21.57■■□□□ 1.04
SPATA41-201ENST00000558307 DNMBPQ6XZF7 1577 aa21.52■■□□□ 1.04
SPATA41-201ENST00000558307 IFT140Q96RY7 1462 aa21.45■■□□□ 1.02
SPATA41-201ENST00000558307 RAD54L2Q9Y4B4 1467 aa21.43■■□□□ 1.02
SPATA41-201ENST00000558307 TARBP1Q13395 1621 aaKnown RBP21.41■■□□□ 1.02
SPATA41-201ENST00000558307 EIF4G3O43432 1585 aaKnown RBP21.41■■□□□ 1.02
SPATA41-201ENST00000558307 POLA1P09884 1462 aaPredicted RBP21.41■■□□□ 1.02
SPATA41-201ENST00000558307 CUX1P39880 1505 aa21.4■■□□□ 1.02
SPATA41-201ENST00000558307 AQRO60306 1485 aaKnown RBP eCLIP21.38■■□□□ 1.01
SPATA41-201ENST00000558307 ABCC8Q09428 1581 aa21.35■■□□□ 1.01
SPATA41-201ENST00000558307 FGD5Q6ZNL6 1462 aa21.34■■□□□ 1.01
SPATA41-201ENST00000558307 TDRD9Q8NDG6 1382 aaKnown RBP21.28■■□□□ 1
SPATA41-201ENST00000558307 SOGA1O94964 1423 aa21.27■■□□□ 1
SPATA41-201ENST00000558307 TRIM41Q8WV44 630 aa21.26■□□□□ 0.99
SPATA41-201ENST00000558307 CHD1O14646 1710 aa21.25■□□□□ 0.99
SPATA41-201ENST00000558307 OSCARQ8IYS5 282 aa21.25■□□□□ 0.99
SPATA41-201ENST00000558307 WDR97A6NE52 1622 aa21.2■□□□□ 0.98
SPATA41-201ENST00000558307 SYNJ1O43426 1573 aa21.15■□□□□ 0.98
SPATA41-201ENST00000558307 SNAPC4Q5SXM2 1469 aa21.14■□□□□ 0.98
SPATA41-201ENST00000558307 FBLN2P98095 1184 aa21.14■□□□□ 0.97
SPATA41-201ENST00000558307 RIMBP3CA6NJZ7 1639 aa21.13■□□□□ 0.97
SPATA41-201ENST00000558307 RIMBP3BA6NNM3 1639 aa21.13■□□□□ 0.97
SPATA41-201ENST00000558307 RIMBP3Q9UFD9 1639 aa21.13■□□□□ 0.97
SPATA41-201ENST00000558307 PBRM1Q86U86 1689 aa21.08■□□□□ 0.96
SPATA41-201ENST00000558307 BIVM-ERCC5R4GMW8 1640 aa21.07■□□□□ 0.96
SPATA41-201ENST00000558307 WRNQ14191 1432 aaPredicted RBP eCLIP21.05■□□□□ 0.96
SPATA41-201ENST00000558307 TOP2BQ02880 1626 aa21.04■□□□□ 0.96
SPATA41-201ENST00000558307 ABCA5Q8WWZ7 1642 aa21.04■□□□□ 0.96
SPATA41-201ENST00000558307 ARHGEF11O15085 1522 aa21.04■□□□□ 0.96
SPATA41-201ENST00000558307 ABCA10Q8WWZ4 1543 aa21.03■□□□□ 0.96
SPATA41-201ENST00000558307 GRIN2BQ13224 1484 aa21.02■□□□□ 0.96
SPATA41-201ENST00000558307 GAPVD1Q14C86 1478 aa21.01■□□□□ 0.95
SPATA41-201ENST00000558307 MAGI1Q96QZ7 1491 aaPredicted RBP20.95■□□□□ 0.94
SPATA41-201ENST00000558307 CLASP1Q7Z460 1538 aa20.94■□□□□ 0.94
SPATA41-201ENST00000558307 CHMP7Q8WUX9 453 aaPredicted RBP20.93■□□□□ 0.94
SPATA41-201ENST00000558307 SYNJ2O15056 1496 aa20.92■□□□□ 0.94
SPATA41-201ENST00000558307 ARAP1Q96P48 1450 aa20.91■□□□□ 0.94
SPATA41-201ENST00000558307 ADAMTS12P58397 1594 aa20.87■□□□□ 0.93
SPATA41-201ENST00000558307 CYB5RLQ6IPT4 315 aa20.86■□□□□ 0.93
SPATA41-201ENST00000558307 CEP170Q5SW79 1584 aa20.8■□□□□ 0.92
SPATA41-201ENST00000558307 ERCC6L2Q5T890 1561 aa20.8■□□□□ 0.92
SPATA41-201ENST00000558307 GRIN2AQ12879 1464 aa20.79■□□□□ 0.92
SPATA41-201ENST00000558307 ERICH3Q5RHP9 1530 aa20.73■□□□□ 0.91
SPATA41-201ENST00000558307 FHAD1B1AJZ9 1412 aa20.72■□□□□ 0.91
SPATA41-201ENST00000558307 NUP160Q12769 1436 aa20.7■□□□□ 0.9
SPATA41-201ENST00000558307 IGF1RP08069 1367 aa20.6■□□□□ 0.89
SPATA41-201ENST00000558307 SHROOM2Q13796 1616 aa20.6■□□□□ 0.89
SPATA41-201ENST00000558307 RUSC2Q8N2Y8 1516 aa20.58■□□□□ 0.89
SPATA41-201ENST00000558307 KIF27Q86VH2 1401 aa20.56■□□□□ 0.88
SPATA41-201ENST00000558307 TRHP20396 242 aaPredicted RBP20.52■□□□□ 0.88
SPATA41-201ENST00000558307 PRG4Q92954 1404 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms