RNA–Protein interactions for RNA: ENST00000558276.7

PBX4-204, Transcript of PBX homeobox 4, humanhuman

TSL 2

Gene PBX4, Length 727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-204ENST00000558276 NISCHQ9Y2I1 1504 aa52.17■■■■■ 5.94
PBX4-204ENST00000558276 CCDC180Q9P1Z9 1646 aa46.9■■■■■ 5.1
PBX4-204ENST00000558276 ABCC9O60706 1549 aa46.79■■■■■ 5.08
PBX4-204ENST00000558276 RB1CC1Q8TDY2 1594 aa44.61■■■■■ 4.73
PBX4-204ENST00000558276 NACADO15069 1562 aa44.28■■■■■ 4.68
PBX4-204ENST00000558276 DCAF8L2P0C7V8 631 aa44.09■■■■■ 4.65
PBX4-204ENST00000558276 DNAJC5BQ9UF47 199 aa43.66■■■■■ 4.58
PBX4-204ENST00000558276 UNC13AQ9UPW8 1703 aa43.63■■■■■ 4.58
PBX4-204ENST00000558276 MYO15BQ96JP2 1530 aa43.63■■■■■ 4.57
PBX4-204ENST00000558276 PABPN1Q86U42 306 aaKnown RBP eCLIP43.51■■■■■ 4.56
PBX4-204ENST00000558276 ZCCHC6Q5VYS8 1495 aaKnown RBP43.25■■■■■ 4.51
PBX4-204ENST00000558276 BICRAQ9NZM4 1560 aa43.19■■■■■ 4.5
PBX4-204ENST00000558276 DCAF1Q9Y4B6 1507 aa43.09■■■■■ 4.49
PBX4-204ENST00000558276 SCRIBQ14160 1630 aa42.74■■■■■ 4.43
PBX4-204ENST00000558276 SHROOM4Q9ULL8 1493 aa42.69■■■■■ 4.42
PBX4-204ENST00000558276 CC2D2AQ9P2K1 1620 aa42.28■■■■■ 4.36
PBX4-204ENST00000558276 EIF4G1Q04637 1599 aaKnown RBP42.2■■■■■ 4.35
PBX4-204ENST00000558276 CECR2Q9BXF3 1484 aa42.14■■■■■ 4.34
PBX4-204ENST00000558276 NCAPD3P42695 1498 aa40.79■■■■■ 4.12
PBX4-204ENST00000558276 SMARCA4P51532 1647 aa40.75■■■■■ 4.11
PBX4-204ENST00000558276 ATAD2BQ9ULI0 1458 aa40.7■■■■■ 4.11
PBX4-204ENST00000558276 SMARCA2P51531 1590 aa40.68■■■■■ 4.1
PBX4-204ENST00000558276 HMGXB3Q12766 1538 aa40.57■■■■■ 4.09
PBX4-204ENST00000558276 BAZ1AQ9NRL2 1556 aaPredicted RBP40.57■■■■■ 4.08
PBX4-204ENST00000558276 ERCC6Q03468 1493 aa40.47■■■■■ 4.07
PBX4-204ENST00000558276 BAZ1BQ9UIG0 1483 aaKnown RBP40.39■■■■■ 4.06
PBX4-204ENST00000558276 CUX2O14529 1486 aa40.32■■■■■ 4.04
PBX4-204ENST00000558276 PEG3Q9GZU2 1588 aa40.3■■■■■ 4.04
PBX4-204ENST00000558276 MROH2BQ7Z745 1585 aa40.18■■■■■ 4.02
PBX4-204ENST00000558276 NESP48681 1621 aa40.16■■■■■ 4.02
PBX4-204ENST00000558276 DNAJC5Q9H3Z4 198 aa40.13■■■■■ 4.01
PBX4-204ENST00000558276 LAMC3Q9Y6N6 1575 aa39.98■■■■□ 3.99
PBX4-204ENST00000558276 THOC2Q8NI27 1593 aaKnown RBP39.8■■■■□ 3.96
PBX4-204ENST00000558276 WIZO95785 1651 aa39.77■■■■□ 3.96
PBX4-204ENST00000558276 KIF21AQ7Z4S6 1674 aa39.76■■■■□ 3.96
PBX4-204ENST00000558276 PDS5BQ9NTI5 1447 aa39.72■■■■□ 3.95
PBX4-204ENST00000558276 CADPSQ9ULU8 1353 aa39.58■■■■□ 3.93
PBX4-204ENST00000558276 MRC2Q9UBG0 1479 aa39.37■■■■□ 3.89
PBX4-204ENST00000558276 RSF1Q96T23 1441 aaPredicted RBP39.34■■■■□ 3.89
PBX4-204ENST00000558276 TOP2AP11388 1531 aaKnown RBP39.28■■■■□ 3.88
PBX4-204ENST00000558276 CEP164Q9UPV0 1460 aa39.26■■■■□ 3.88
PBX4-204ENST00000558276 WDR62O43379 1518 aa39.25■■■■□ 3.87
PBX4-204ENST00000558276 FANCD2Q9BXW9 1451 aa39.18■■■■□ 3.86
PBX4-204ENST00000558276 CFTRP13569 1480 aa39.13■■■■□ 3.85
PBX4-204ENST00000558276 PRDM2Q13029 1718 aa38.96■■■■□ 3.83
PBX4-204ENST00000558276 URB2Q14146 1524 aaKnown RBP38.81■■■■□ 3.8
PBX4-204ENST00000558276 CCDC88BA6NC98 1476 aa38.76■■■■□ 3.8
PBX4-204ENST00000558276 TRIM41Q8WV44 630 aa38.53■■■■□ 3.76
PBX4-204ENST00000558276 OSCARQ8IYS5 282 aa38.46■■■■□ 3.75
PBX4-204ENST00000558276 IFT140Q96RY7 1462 aa38.44■■■■□ 3.74
PBX4-204ENST00000558276 TOPBP1Q92547 1522 aa38.43■■■■□ 3.74
PBX4-204ENST00000558276 ABCC8Q09428 1581 aa38.4■■■■□ 3.74
PBX4-204ENST00000558276 DNMBPQ6XZF7 1577 aa38.34■■■■□ 3.73
PBX4-204ENST00000558276 ZNF608Q9ULD9 1512 aaPredicted RBP38.32■■■■□ 3.72
PBX4-204ENST00000558276 EIF4G3O43432 1585 aaKnown RBP38.21■■■■□ 3.71
PBX4-204ENST00000558276 TARBP1Q13395 1621 aaKnown RBP38.08■■■■□ 3.69
PBX4-204ENST00000558276 POLA1P09884 1462 aaPredicted RBP38.03■■■■□ 3.68
PBX4-204ENST00000558276 RIMBP3CA6NJZ7 1639 aa38.01■■■■□ 3.67
PBX4-204ENST00000558276 RIMBP3BA6NNM3 1639 aa38.01■■■■□ 3.67
PBX4-204ENST00000558276 RIMBP3Q9UFD9 1639 aa38.01■■■■□ 3.67
PBX4-204ENST00000558276 AQRO60306 1485 aaKnown RBP eCLIP37.98■■■■□ 3.673e-7■■■■■ 36.6
PBX4-204ENST00000558276 CHD1O14646 1710 aa37.96■■■■□ 3.67
PBX4-204ENST00000558276 RAD54L2Q9Y4B4 1467 aa37.88■■■■□ 3.65
PBX4-204ENST00000558276 SOGA1O94964 1423 aa37.87■■■■□ 3.65
PBX4-204ENST00000558276 ARHGEF11O15085 1522 aa37.86■■■■□ 3.65
PBX4-204ENST00000558276 FGD5Q6ZNL6 1462 aa37.84■■■■□ 3.65
PBX4-204ENST00000558276 FBLN2P98095 1184 aa37.82■■■■□ 3.64
PBX4-204ENST00000558276 WDR97A6NE52 1622 aa37.77■■■■□ 3.64
PBX4-204ENST00000558276 CUX1P39880 1505 aa37.77■■■■□ 3.64
PBX4-204ENST00000558276 TDRD9Q8NDG6 1382 aaKnown RBP37.76■■■■□ 3.64
PBX4-204ENST00000558276 SUPT5HO00267 1087 aaKnown RBP37.73■■■■□ 3.63
PBX4-204ENST00000558276 SNAPC4Q5SXM2 1469 aa37.65■■■■□ 3.62
PBX4-204ENST00000558276 MAGI1Q96QZ7 1491 aaPredicted RBP37.57■■■■□ 3.6
PBX4-204ENST00000558276 CYB5RLQ6IPT4 315 aa37.56■■■■□ 3.6
PBX4-204ENST00000558276 GRIN2BQ13224 1484 aa37.56■■■■□ 3.6
PBX4-204ENST00000558276 CHMP7Q8WUX9 453 aaPredicted RBP37.52■■■■□ 3.6
PBX4-204ENST00000558276 PBRM1Q86U86 1689 aa37.52■■■■□ 3.6
PBX4-204ENST00000558276 SYNJ1O43426 1573 aa37.5■■■■□ 3.59
PBX4-204ENST00000558276 ARAP1Q96P48 1450 aa37.45■■■■□ 3.59
PBX4-204ENST00000558276 GAPVD1Q14C86 1478 aa37.43■■■■□ 3.58
PBX4-204ENST00000558276 SYNJ2O15056 1496 aa37.42■■■■□ 3.58
PBX4-204ENST00000558276 CLASP1Q7Z460 1538 aa37.41■■■■□ 3.58
PBX4-204ENST00000558276 ABCA10Q8WWZ4 1543 aa37.38■■■■□ 3.57
PBX4-204ENST00000558276 ABCA5Q8WWZ7 1642 aa37.36■■■■□ 3.57
PBX4-204ENST00000558276 WRNQ14191 1432 aaPredicted RBP eCLIP37.27■■■■□ 3.56
PBX4-204ENST00000558276 BIVM-ERCC5R4GMW8 1640 aa37.25■■■■□ 3.55
PBX4-204ENST00000558276 TOP2BQ02880 1626 aa37.22■■■■□ 3.55
PBX4-204ENST00000558276 TRHP20396 242 aaPredicted RBP37.21■■■■□ 3.55
PBX4-204ENST00000558276 ADAMTS12P58397 1594 aa37.08■■■■□ 3.53
PBX4-204ENST00000558276 GRIN2AQ12879 1464 aa37.07■■■■□ 3.53
PBX4-204ENST00000558276 ERICH3Q5RHP9 1530 aa36.95■■■■□ 3.51
PBX4-204ENST00000558276 FHAD1B1AJZ9 1412 aa36.95■■■■□ 3.51
PBX4-204ENST00000558276 CEP170Q5SW79 1584 aa36.93■■■■□ 3.5
PBX4-204ENST00000558276 NUP160Q12769 1436 aa36.9■■■■□ 3.5
PBX4-204ENST00000558276 ERCC6L2Q5T890 1561 aa36.81■■■■□ 3.48
PBX4-204ENST00000558276 SHROOM2Q13796 1616 aa36.77■■■■□ 3.48
PBX4-204ENST00000558276 PRG4Q92954 1404 aaPredicted RBP36.58■■■■□ 3.45
PBX4-204ENST00000558276 RUSC2Q8N2Y8 1516 aa36.57■■■■□ 3.44
PBX4-204ENST00000558276 JPH4Q96JJ6 628 aa36.52■■■■□ 3.44
PBX4-204ENST00000558276 KIF27Q86VH2 1401 aa36.51■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms