RNA–Protein interactions for RNA: ENST00000558033.5

ALDH1A3-204, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

TSL 3

Gene ALDH1A3, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-204ENST00000558033 NISCHQ9Y2I1 1504 aa48.6■■■■■ 5.37
ALDH1A3-204ENST00000558033 CCDC180Q9P1Z9 1646 aa43.35■■■■■ 4.53
ALDH1A3-204ENST00000558033 ABCC9O60706 1549 aa42.8■■■■■ 4.44
ALDH1A3-204ENST00000558033 RB1CC1Q8TDY2 1594 aa40.96■■■■■ 4.15
ALDH1A3-204ENST00000558033 NACADO15069 1562 aa40.82■■■■■ 4.13
ALDH1A3-204ENST00000558033 DCAF8L2P0C7V8 631 aa40.72■■■■■ 4.11
ALDH1A3-204ENST00000558033 MYO15BQ96JP2 1530 aa40.46■■■■■ 4.07
ALDH1A3-204ENST00000558033 ZCCHC6Q5VYS8 1495 aaKnown RBP40.42■■■■■ 4.06
ALDH1A3-204ENST00000558033 DCAF1Q9Y4B6 1507 aa40.16■■■■■ 4.02
ALDH1A3-204ENST00000558033 UNC13AQ9UPW8 1703 aa40.12■■■■■ 4.01
ALDH1A3-204ENST00000558033 PABPN1Q86U42 306 aaKnown RBP eCLIP39.94■■■■□ 3.98
ALDH1A3-204ENST00000558033 BICRAQ9NZM4 1560 aa39.82■■■■□ 3.97
ALDH1A3-204ENST00000558033 DNAJC5BQ9UF47 199 aa39.66■■■■□ 3.94
ALDH1A3-204ENST00000558033 SCRIBQ14160 1630 aa39.58■■■■□ 3.93
ALDH1A3-204ENST00000558033 SHROOM4Q9ULL8 1493 aa39.25■■■■□ 3.87
ALDH1A3-204ENST00000558033 EIF4G1Q04637 1599 aaKnown RBP38.76■■■■□ 3.8
ALDH1A3-204ENST00000558033 CC2D2AQ9P2K1 1620 aa38.7■■■■□ 3.79
ALDH1A3-204ENST00000558033 CECR2Q9BXF3 1484 aa38.47■■■■□ 3.75
ALDH1A3-204ENST00000558033 SMARCA4P51532 1647 aa37.8■■■■□ 3.64
ALDH1A3-204ENST00000558033 NCAPD3P42695 1498 aa37.69■■■■□ 3.62
ALDH1A3-204ENST00000558033 ATAD2BQ9ULI0 1458 aa37.68■■■■□ 3.62
ALDH1A3-204ENST00000558033 BAZ1AQ9NRL2 1556 aaPredicted RBP37.67■■■■□ 3.62
ALDH1A3-204ENST00000558033 SMARCA2P51531 1590 aa37.58■■■■□ 3.61
ALDH1A3-204ENST00000558033 MROH2BQ7Z745 1585 aa37.49■■■■□ 3.59
ALDH1A3-204ENST00000558033 HMGXB3Q12766 1538 aa37.47■■■■□ 3.59
ALDH1A3-204ENST00000558033 PEG3Q9GZU2 1588 aa37.42■■■■□ 3.58
ALDH1A3-204ENST00000558033 BAZ1BQ9UIG0 1483 aaKnown RBP37.33■■■■□ 3.57
ALDH1A3-204ENST00000558033 WIZO95785 1651 aa37.07■■■■□ 3.52
ALDH1A3-204ENST00000558033 NESP48681 1621 aa36.96■■■■□ 3.51
ALDH1A3-204ENST00000558033 RSF1Q96T23 1441 aaPredicted RBP36.91■■■■□ 3.5
ALDH1A3-204ENST00000558033 ERCC6Q03468 1493 aa36.87■■■■□ 3.49
ALDH1A3-204ENST00000558033 LAMC3Q9Y6N6 1575 aa36.74■■■■□ 3.47
ALDH1A3-204ENST00000558033 TOP2AP11388 1531 aaKnown RBP36.61■■■■□ 3.45
ALDH1A3-204ENST00000558033 CUX2O14529 1486 aa36.61■■■■□ 3.45
ALDH1A3-204ENST00000558033 CADPSQ9ULU8 1353 aa36.57■■■■□ 3.45
ALDH1A3-204ENST00000558033 KIF21AQ7Z4S6 1674 aa36.51■■■■□ 3.43
ALDH1A3-204ENST00000558033 PDS5BQ9NTI5 1447 aa36.49■■■■□ 3.43
ALDH1A3-204ENST00000558033 THOC2Q8NI27 1593 aaKnown RBP36.47■■■■□ 3.43
ALDH1A3-204ENST00000558033 CFTRP13569 1480 aa36.3■■■■□ 3.4
ALDH1A3-204ENST00000558033 CCDC88BA6NC98 1476 aa36.2■■■■□ 3.39
ALDH1A3-204ENST00000558033 FANCD2Q9BXW9 1451 aa36.17■■■■□ 3.38
ALDH1A3-204ENST00000558033 MRC2Q9UBG0 1479 aa36.17■■■■□ 3.38
ALDH1A3-204ENST00000558033 CEP164Q9UPV0 1460 aa36.14■■■■□ 3.38
ALDH1A3-204ENST00000558033 WDR62O43379 1518 aa36.08■■■■□ 3.37
ALDH1A3-204ENST00000558033 PRDM2Q13029 1718 aa36■■■■□ 3.35
ALDH1A3-204ENST00000558033 DNAJC5Q9H3Z4 198 aa35.92■■■■□ 3.34
ALDH1A3-204ENST00000558033 URB2Q14146 1524 aaKnown RBP35.87■■■■□ 3.33
ALDH1A3-204ENST00000558033 SUPT5HO00267 1087 aaKnown RBP35.69■■■■□ 3.3
ALDH1A3-204ENST00000558033 TOPBP1Q92547 1522 aa35.57■■■■□ 3.28
ALDH1A3-204ENST00000558033 DNMBPQ6XZF7 1577 aa35.47■■■■□ 3.27
ALDH1A3-204ENST00000558033 ABCC8Q09428 1581 aa35.46■■■■□ 3.27
ALDH1A3-204ENST00000558033 IFT140Q96RY7 1462 aa35.39■■■■□ 3.26
ALDH1A3-204ENST00000558033 ZNF608Q9ULD9 1512 aaPredicted RBP35.33■■■■□ 3.25
ALDH1A3-204ENST00000558033 POLA1P09884 1462 aaPredicted RBP35.24■■■■□ 3.23
ALDH1A3-204ENST00000558033 TARBP1Q13395 1621 aaKnown RBP35.22■■■■□ 3.23
ALDH1A3-204ENST00000558033 CUX1P39880 1505 aa35.19■■■■□ 3.22
ALDH1A3-204ENST00000558033 EIF4G3O43432 1585 aaKnown RBP35.16■■■■□ 3.22
ALDH1A3-204ENST00000558033 RAD54L2Q9Y4B4 1467 aa35.11■■■■□ 3.21
ALDH1A3-204ENST00000558033 FGD5Q6ZNL6 1462 aa35.1■■■■□ 3.21
ALDH1A3-204ENST00000558033 AQRO60306 1485 aaKnown RBP eCLIP35.07■■■■□ 3.2
ALDH1A3-204ENST00000558033 SOGA1O94964 1423 aa35.06■■■■□ 3.2
ALDH1A3-204ENST00000558033 OSCARQ8IYS5 282 aa35■■■■□ 3.19
ALDH1A3-204ENST00000558033 TDRD9Q8NDG6 1382 aaKnown RBP34.94■■■■□ 3.18
ALDH1A3-204ENST00000558033 WDR97A6NE52 1622 aa34.85■■■■□ 3.17
ALDH1A3-204ENST00000558033 CHD1O14646 1710 aa34.79■■■■□ 3.16
ALDH1A3-204ENST00000558033 WRNQ14191 1432 aaPredicted RBP eCLIP34.78■■■■□ 3.16
ALDH1A3-204ENST00000558033 SYNJ1O43426 1573 aa34.78■■■■□ 3.16
ALDH1A3-204ENST00000558033 BIVM-ERCC5R4GMW8 1640 aa34.77■■■■□ 3.16
ALDH1A3-204ENST00000558033 TOP2BQ02880 1626 aa34.76■■■■□ 3.15
ALDH1A3-204ENST00000558033 ABCA10Q8WWZ4 1543 aa34.73■■■■□ 3.15
ALDH1A3-204ENST00000558033 SNAPC4Q5SXM2 1469 aa34.72■■■■□ 3.15
ALDH1A3-204ENST00000558033 GRIN2BQ13224 1484 aa34.69■■■■□ 3.14
ALDH1A3-204ENST00000558033 FBLN2P98095 1184 aa34.67■■■■□ 3.14
ALDH1A3-204ENST00000558033 GAPVD1Q14C86 1478 aa34.65■■■■□ 3.14
ALDH1A3-204ENST00000558033 ABCA5Q8WWZ7 1642 aa34.65■■■■□ 3.14
ALDH1A3-204ENST00000558033 PBRM1Q86U86 1689 aa34.63■■■■□ 3.13
ALDH1A3-204ENST00000558033 MAGI1Q96QZ7 1491 aaPredicted RBP34.63■■■■□ 3.13
ALDH1A3-204ENST00000558033 TRIM41Q8WV44 630 aa34.59■■■■□ 3.13
ALDH1A3-204ENST00000558033 RIMBP3CA6NJZ7 1639 aa34.56■■■■□ 3.12
ALDH1A3-204ENST00000558033 RIMBP3BA6NNM3 1639 aa34.56■■■■□ 3.12
ALDH1A3-204ENST00000558033 RIMBP3Q9UFD9 1639 aa34.56■■■■□ 3.12
ALDH1A3-204ENST00000558033 SYNJ2O15056 1496 aa34.51■■■■□ 3.11
ALDH1A3-204ENST00000558033 ARHGEF11O15085 1522 aa34.5■■■■□ 3.11
ALDH1A3-204ENST00000558033 CHMP7Q8WUX9 453 aaPredicted RBP34.5■■■■□ 3.11
ALDH1A3-204ENST00000558033 CLASP1Q7Z460 1538 aa34.4■■■■□ 3.1
ALDH1A3-204ENST00000558033 ADAMTS12P58397 1594 aa34.34■■■■□ 3.09
ALDH1A3-204ENST00000558033 ERICH3Q5RHP9 1530 aa34.29■■■■□ 3.08
ALDH1A3-204ENST00000558033 GRIN2AQ12879 1464 aa34.26■■■■□ 3.07
ALDH1A3-204ENST00000558033 FHAD1B1AJZ9 1412 aa34.22■■■■□ 3.07
ALDH1A3-204ENST00000558033 ARAP1Q96P48 1450 aa34.22■■■■□ 3.07
ALDH1A3-204ENST00000558033 CYB5RLQ6IPT4 315 aa34.18■■■■□ 3.06
ALDH1A3-204ENST00000558033 CEP170Q5SW79 1584 aa34.14■■■■□ 3.06
ALDH1A3-204ENST00000558033 NUP160Q12769 1436 aa34.13■■■■□ 3.05
ALDH1A3-204ENST00000558033 KIF27Q86VH2 1401 aa34.05■■■■□ 3.04
ALDH1A3-204ENST00000558033 IGF1RP08069 1367 aa34■■■■□ 3.03
ALDH1A3-204ENST00000558033 ERCC6L2Q5T890 1561 aa33.94■■■■□ 3.02
ALDH1A3-204ENST00000558033 SHROOM2Q13796 1616 aa33.93■■■■□ 3.02
ALDH1A3-204ENST00000558033 CUL7Q14999 1698 aa33.91■■■■□ 3.02
ALDH1A3-204ENST00000558033 RUSC2Q8N2Y8 1516 aa33.84■■■■□ 3.01
ALDH1A3-204ENST00000558033 CARMIL1Q5VZK9 1371 aa33.77■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms