RNA–Protein interactions for RNA: ENST00000558032.5

LRRC49-206, Transcript of leucine rich repeat containing 49, humanhuman

TSL 4

Gene LRRC49, Length 546 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-206ENST00000558032 AEBP2Q6ZN18 517 aaPredicted RBP20.97■□□□□ 0.95
LRRC49-206ENST00000558032 NISCHQ9Y2I1 1504 aa20.7■□□□□ 0.9
LRRC49-206ENST00000558032 CHIC1Q5VXU3 224 aa19.97■□□□□ 0.79
LRRC49-206ENST00000558032 ABCC9O60706 1549 aa19.15■□□□□ 0.66
LRRC49-206ENST00000558032 CCDC180Q9P1Z9 1646 aa18.71■□□□□ 0.59
LRRC49-206ENST00000558032 DNAJC5BQ9UF47 199 aa18.22■□□□□ 0.51
LRRC49-206ENST00000558032 RB1CC1Q8TDY2 1594 aa18.03■□□□□ 0.48
LRRC49-206ENST00000558032 DCAF8L2P0C7V8 631 aa17.8■□□□□ 0.44
LRRC49-206ENST00000558032 NACADO15069 1562 aa17.79■□□□□ 0.44
LRRC49-206ENST00000558032 PABPN1Q86U42 306 aaKnown RBP eCLIP17.79■□□□□ 0.44
LRRC49-206ENST00000558032 SENP3Q9H4L4 574 aaPredicted RBP17.76■□□□□ 0.43
LRRC49-206ENST00000558032 PHF23Q9BUL5 403 aaPredicted RBP17.57■□□□□ 0.4
LRRC49-206ENST00000558032 UNC13AQ9UPW8 1703 aa17.57■□□□□ 0.4
LRRC49-206ENST00000558032 BICRAQ9NZM4 1560 aa17.45■□□□□ 0.38
LRRC49-206ENST00000558032 MYO15BQ96JP2 1530 aa17.37■□□□□ 0.37
LRRC49-206ENST00000558032 CECR2Q9BXF3 1484 aa17.27■□□□□ 0.36
LRRC49-206ENST00000558032 CC2D2AQ9P2K1 1620 aa17.24■□□□□ 0.35
LRRC49-206ENST00000558032 SHROOM4Q9ULL8 1493 aa17.19■□□□□ 0.34
LRRC49-206ENST00000558032 EIF4G1Q04637 1599 aaKnown RBP17.11■□□□□ 0.33
LRRC49-206ENST00000558032 SCRIBQ14160 1630 aa17.1■□□□□ 0.33
LRRC49-206ENST00000558032 ZCCHC6Q5VYS8 1495 aaKnown RBP17.07■□□□□ 0.32
LRRC49-206ENST00000558032 DCAF1Q9Y4B6 1507 aa17.03■□□□□ 0.32
LRRC49-206ENST00000558032 DNAJC5Q9H3Z4 198 aa17.01■□□□□ 0.31
LRRC49-206ENST00000558032 CUX2O14529 1486 aa16.61■□□□□ 0.25
LRRC49-206ENST00000558032 FOXD1Q16676 465 aa16.59■□□□□ 0.25
LRRC49-206ENST00000558032 ERCC6Q03468 1493 aa16.59■□□□□ 0.25
LRRC49-206ENST00000558032 NCAPD3P42695 1498 aa16.42■□□□□ 0.22
LRRC49-206ENST00000558032 ATAD2BQ9ULI0 1458 aa16.34■□□□□ 0.21
LRRC49-206ENST00000558032 NESP48681 1621 aa16.31■□□□□ 0.2
LRRC49-206ENST00000558032 SMARCA2P51531 1590 aa16.28■□□□□ 0.2
LRRC49-206ENST00000558032 HMGXB3Q12766 1538 aa16.27■□□□□ 0.2
LRRC49-206ENST00000558032 SMARCA4P51532 1647 aa16.23■□□□□ 0.19
LRRC49-206ENST00000558032 TRIM41Q8WV44 630 aa16.23■□□□□ 0.19
LRRC49-206ENST00000558032 BAZ1BQ9UIG0 1483 aaKnown RBP16.2■□□□□ 0.18
LRRC49-206ENST00000558032 THOC2Q8NI27 1593 aaKnown RBP16.18■□□□□ 0.18
LRRC49-206ENST00000558032 LAMC3Q9Y6N6 1575 aa16.13■□□□□ 0.17
LRRC49-206ENST00000558032 BAZ1AQ9NRL2 1556 aaPredicted RBP16.11■□□□□ 0.17
LRRC49-206ENST00000558032 PDS5BQ9NTI5 1447 aa16.09■□□□□ 0.17
LRRC49-206ENST00000558032 KIF21AQ7Z4S6 1674 aa16.08■□□□□ 0.17
LRRC49-206ENST00000558032 PEG3Q9GZU2 1588 aa16.03■□□□□ 0.16
LRRC49-206ENST00000558032 MRC2Q9UBG0 1479 aa15.96■□□□□ 0.14
LRRC49-206ENST00000558032 MROH2BQ7Z745 1585 aa15.96■□□□□ 0.14
LRRC49-206ENST00000558032 CADPSQ9ULU8 1353 aa15.94■□□□□ 0.14
LRRC49-206ENST00000558032 PLPPR3Q6T4P5 718 aa15.92■□□□□ 0.14
LRRC49-206ENST00000558032 WDR62O43379 1518 aa15.89■□□□□ 0.13
LRRC49-206ENST00000558032 OSCARQ8IYS5 282 aa15.84■□□□□ 0.13
LRRC49-206ENST00000558032 CEP164Q9UPV0 1460 aa15.84■□□□□ 0.13
LRRC49-206ENST00000558032 FANCD2Q9BXW9 1451 aa15.78■□□□□ 0.12
LRRC49-206ENST00000558032 WIZO95785 1651 aa15.76■□□□□ 0.11
LRRC49-206ENST00000558032 CFTRP13569 1480 aa15.65■□□□□ 0.1
LRRC49-206ENST00000558032 URB2Q14146 1524 aaKnown RBP15.63■□□□□ 0.09
LRRC49-206ENST00000558032 RIMBP3CA6NJZ7 1639 aa15.63■□□□□ 0.09
LRRC49-206ENST00000558032 RIMBP3BA6NNM3 1639 aa15.63■□□□□ 0.09
LRRC49-206ENST00000558032 RIMBP3Q9UFD9 1639 aa15.63■□□□□ 0.09
LRRC49-206ENST00000558032 PPP6R1Q9UPN7 881 aa15.62■□□□□ 0.09
LRRC49-206ENST00000558032 ARHGEF11O15085 1522 aa15.54■□□□□ 0.08
LRRC49-206ENST00000558032 TOP2AP11388 1531 aaKnown RBP15.53■□□□□ 0.08
LRRC49-206ENST00000558032 TRHP20396 242 aaPredicted RBP15.52■□□□□ 0.08
LRRC49-206ENST00000558032 CYB5RLQ6IPT4 315 aa15.52■□□□□ 0.08
LRRC49-206ENST00000558032 ZNF608Q9ULD9 1512 aaPredicted RBP15.52■□□□□ 0.07
LRRC49-206ENST00000558032 IFT140Q96RY7 1462 aa15.52■□□□□ 0.07
LRRC49-206ENST00000558032 RSF1Q96T23 1441 aaPredicted RBP15.5■□□□□ 0.07
LRRC49-206ENST00000558032 ADRA2BP18089 450 aa15.48■□□□□ 0.07
LRRC49-206ENST00000558032 PRDM2Q13029 1718 aa15.46■□□□□ 0.07
LRRC49-206ENST00000558032 MSH5O43196 834 aa15.42■□□□□ 0.06
LRRC49-206ENST00000558032 FBLN2P98095 1184 aa15.42■□□□□ 0.06
LRRC49-206ENST00000558032 TOPBP1Q92547 1522 aa15.42■□□□□ 0.06
LRRC49-206ENST00000558032 EIF4G3O43432 1585 aaKnown RBP15.41■□□□□ 0.06
LRRC49-206ENST00000558032 PIAS4Q8N2W9 510 aaPredicted RBP15.4■□□□□ 0.06
LRRC49-206ENST00000558032 CHD1O14646 1710 aa15.37■□□□□ 0.05
LRRC49-206ENST00000558032 ABCC8Q09428 1581 aa15.36■□□□□ 0.05
LRRC49-206ENST00000558032 CCDC88BA6NC98 1476 aa15.36■□□□□ 0.05
LRRC49-206ENST00000558032 ARAP1Q96P48 1450 aa15.36■□□□□ 0.05
LRRC49-206ENST00000558032 AQRO60306 1485 aaKnown RBP eCLIP15.35■□□□□ 0.05
LRRC49-206ENST00000558032 DNMBPQ6XZF7 1577 aa15.33■□□□□ 0.05
LRRC49-206ENST00000558032 TARBP1Q13395 1621 aaKnown RBP15.28■□□□□ 0.04
LRRC49-206ENST00000558032 POLA1P09884 1462 aaPredicted RBP15.23■□□□□ 0.03
LRRC49-206ENST00000558032 TDRD9Q8NDG6 1382 aaKnown RBP15.22■□□□□ 0.03
LRRC49-206ENST00000558032 RAD54L2Q9Y4B4 1467 aa15.21■□□□□ 0.03
LRRC49-206ENST00000558032 CHMP7Q8WUX9 453 aaPredicted RBP15.21■□□□□ 0.03
LRRC49-206ENST00000558032 SOGA1O94964 1423 aa15.19■□□□□ 0.02
LRRC49-206ENST00000558032 SNAPC4Q5SXM2 1469 aa15.19■□□□□ 0.02
LRRC49-206ENST00000558032 SYNJ1O43426 1573 aa15.16■□□□□ 0.02
LRRC49-206ENST00000558032 CLASP1Q7Z460 1538 aa15.15■□□□□ 0.02
LRRC49-206ENST00000558032 FGD5Q6ZNL6 1462 aa15.11■□□□□ 0.01
LRRC49-206ENST00000558032 MAGI1Q96QZ7 1491 aaPredicted RBP15.11■□□□□ 0.01
LRRC49-206ENST00000558032 WDR97A6NE52 1622 aa15.1■□□□□ 0.01
LRRC49-206ENST00000558032 GRIN2BQ13224 1484 aa15.08■□□□□ 0.01
LRRC49-206ENST00000558032 SYNJ2O15056 1496 aa15.08■□□□□ 0
LRRC49-206ENST00000558032 GAPVD1Q14C86 1478 aa15.07■□□□□ 0
LRRC49-206ENST00000558032 CUX1P39880 1505 aa15.01□□□□□ -0.01
LRRC49-206ENST00000558032 PBRM1Q86U86 1689 aa14.99□□□□□ -0.01
LRRC49-206ENST00000558032 POTEDQ86YR6 584 aa14.93□□□□□ -0.02
LRRC49-206ENST00000558032 ERCC6L2Q5T890 1561 aa14.91□□□□□ -0.02
LRRC49-206ENST00000558032 ABCA10Q8WWZ4 1543 aa14.89□□□□□ -0.03
LRRC49-206ENST00000558032 GRIN2AQ12879 1464 aa14.89□□□□□ -0.03
LRRC49-206ENST00000558032 ABCA5Q8WWZ7 1642 aa14.88□□□□□ -0.03
LRRC49-206ENST00000558032 CEP170Q5SW79 1584 aa14.86□□□□□ -0.03
LRRC49-206ENST00000558032 ADAMTS12P58397 1594 aa14.82□□□□□ -0.04
LRRC49-206ENST00000558032 NUP160Q12769 1436 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms