RNA–Protein interactions for RNA: ENST00000557982.1

PEX11A-202, Transcript of peroxisomal biogenesis factor 11 alpha, humanhuman

TSL 5

Gene PEX11A, Length 646 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11A-202ENST00000557982 NISCHQ9Y2I1 1504 aa34.5■■■■□ 3.11
PEX11A-202ENST00000557982 CCDC180Q9P1Z9 1646 aa30.94■■■□□ 2.54
PEX11A-202ENST00000557982 ABCC9O60706 1549 aa30.88■■■□□ 2.53
PEX11A-202ENST00000557982 RB1CC1Q8TDY2 1594 aa29.43■■■□□ 2.3
PEX11A-202ENST00000557982 NACADO15069 1562 aa29.23■■■□□ 2.27
PEX11A-202ENST00000557982 DCAF8L2P0C7V8 631 aa29.18■■■□□ 2.26
PEX11A-202ENST00000557982 DNAJC5BQ9UF47 199 aa28.89■■■□□ 2.22
PEX11A-202ENST00000557982 MYO15BQ96JP2 1530 aa28.84■■■□□ 2.21
PEX11A-202ENST00000557982 PABPN1Q86U42 306 aaKnown RBP eCLIP28.78■■■□□ 2.2
PEX11A-202ENST00000557982 UNC13AQ9UPW8 1703 aa28.77■■■□□ 2.2
PEX11A-202ENST00000557982 ZCCHC6Q5VYS8 1495 aaKnown RBP28.59■■■□□ 2.17
PEX11A-202ENST00000557982 BICRAQ9NZM4 1560 aa28.54■■■□□ 2.16
PEX11A-202ENST00000557982 DCAF1Q9Y4B6 1507 aa28.49■■■□□ 2.15
PEX11A-202ENST00000557982 SCRIBQ14160 1630 aa28.21■■■□□ 2.11
PEX11A-202ENST00000557982 SHROOM4Q9ULL8 1493 aa28.16■■■□□ 2.1
PEX11A-202ENST00000557982 CC2D2AQ9P2K1 1620 aa27.9■■■□□ 2.06
PEX11A-202ENST00000557982 EIF4G1Q04637 1599 aaKnown RBP27.85■■■□□ 2.05
PEX11A-202ENST00000557982 CECR2Q9BXF3 1484 aa27.81■■■□□ 2.04
PEX11A-202ENST00000557982 NCAPD3P42695 1498 aa26.98■■□□□ 1.91
PEX11A-202ENST00000557982 ATAD2BQ9ULI0 1458 aa26.91■■□□□ 1.9
PEX11A-202ENST00000557982 SMARCA4P51532 1647 aa26.9■■□□□ 1.9
PEX11A-202ENST00000557982 SMARCA2P51531 1590 aa26.85■■□□□ 1.89
PEX11A-202ENST00000557982 BAZ1AQ9NRL2 1556 aaPredicted RBP26.8■■□□□ 1.88
PEX11A-202ENST00000557982 HMGXB3Q12766 1538 aa26.78■■□□□ 1.88
PEX11A-202ENST00000557982 ERCC6Q03468 1493 aa26.68■■□□□ 1.86
PEX11A-202ENST00000557982 BAZ1BQ9UIG0 1483 aaKnown RBP26.67■■□□□ 1.86
PEX11A-202ENST00000557982 PEG3Q9GZU2 1588 aa26.63■■□□□ 1.85
PEX11A-202ENST00000557982 MROH2BQ7Z745 1585 aa26.59■■□□□ 1.85
PEX11A-202ENST00000557982 CUX2O14529 1486 aa26.57■■□□□ 1.84
PEX11A-202ENST00000557982 NESP48681 1621 aa26.54■■□□□ 1.84
PEX11A-202ENST00000557982 DNAJC5Q9H3Z4 198 aa26.49■■□□□ 1.83
PEX11A-202ENST00000557982 LAMC3Q9Y6N6 1575 aa26.37■■□□□ 1.81
PEX11A-202ENST00000557982 WIZO95785 1651 aa26.29■■□□□ 1.8
PEX11A-202ENST00000557982 THOC2Q8NI27 1593 aaKnown RBP26.24■■□□□ 1.79
PEX11A-202ENST00000557982 PDS5BQ9NTI5 1447 aa26.22■■□□□ 1.79
PEX11A-202ENST00000557982 KIF21AQ7Z4S6 1674 aa26.22■■□□□ 1.79
PEX11A-202ENST00000557982 CADPSQ9ULU8 1353 aa26.18■■□□□ 1.78
PEX11A-202ENST00000557982 RSF1Q96T23 1441 aaPredicted RBP26.06■■□□□ 1.76
PEX11A-202ENST00000557982 MRC2Q9UBG0 1479 aa25.98■■□□□ 1.75
PEX11A-202ENST00000557982 TOP2AP11388 1531 aaKnown RBP25.94■■□□□ 1.74
PEX11A-202ENST00000557982 WDR62O43379 1518 aa25.91■■□□□ 1.74
PEX11A-202ENST00000557982 CEP164Q9UPV0 1460 aa25.91■■□□□ 1.74
PEX11A-202ENST00000557982 CFTRP13569 1480 aa25.88■■□□□ 1.73
PEX11A-202ENST00000557982 FANCD2Q9BXW9 1451 aa25.88■■□□□ 1.73
PEX11A-202ENST00000557982 CCDC88BA6NC98 1476 aa25.66■■□□□ 1.7
PEX11A-202ENST00000557982 PRDM2Q13029 1718 aa25.66■■□□□ 1.7
PEX11A-202ENST00000557982 URB2Q14146 1524 aaKnown RBP25.65■■□□□ 1.7
PEX11A-202ENST00000557982 OSCARQ8IYS5 282 aa25.42■■□□□ 1.66
PEX11A-202ENST00000557982 TOPBP1Q92547 1522 aa25.39■■□□□ 1.66
PEX11A-202ENST00000557982 TRIM41Q8WV44 630 aa25.39■■□□□ 1.66
PEX11A-202ENST00000557982 IFT140Q96RY7 1462 aa25.38■■□□□ 1.65
PEX11A-202ENST00000557982 ABCC8Q09428 1581 aa25.36■■□□□ 1.65
PEX11A-202ENST00000557982 ZNF608Q9ULD9 1512 aaPredicted RBP25.32■■□□□ 1.64
PEX11A-202ENST00000557982 DNMBPQ6XZF7 1577 aa25.31■■□□□ 1.64
PEX11A-202ENST00000557982 EIF4G3O43432 1585 aaKnown RBP25.19■■□□□ 1.62
PEX11A-202ENST00000557982 TARBP1Q13395 1621 aaKnown RBP25.16■■□□□ 1.62
PEX11A-202ENST00000557982 POLA1P09884 1462 aaPredicted RBP25.14■■□□□ 1.61
PEX11A-202ENST00000557982 AQRO60306 1485 aaKnown RBP eCLIP25.12■■□□□ 1.61
PEX11A-202ENST00000557982 RAD54L2Q9Y4B4 1467 aa25.05■■□□□ 1.6
PEX11A-202ENST00000557982 RIMBP3CA6NJZ7 1639 aa25.04■■□□□ 1.6
PEX11A-202ENST00000557982 RIMBP3BA6NNM3 1639 aa25.04■■□□□ 1.6
PEX11A-202ENST00000557982 RIMBP3Q9UFD9 1639 aa25.04■■□□□ 1.6
PEX11A-202ENST00000557982 SOGA1O94964 1423 aa25.04■■□□□ 1.6
PEX11A-202ENST00000557982 SUPT5HO00267 1087 aaKnown RBP25.02■■□□□ 1.6
PEX11A-202ENST00000557982 CHD1O14646 1710 aa25.01■■□□□ 1.59
PEX11A-202ENST00000557982 FBLN2P98095 1184 aa24.99■■□□□ 1.59
PEX11A-202ENST00000557982 FGD5Q6ZNL6 1462 aa24.99■■□□□ 1.59
PEX11A-202ENST00000557982 TDRD9Q8NDG6 1382 aaKnown RBP24.99■■□□□ 1.59
PEX11A-202ENST00000557982 CUX1P39880 1505 aa24.97■■□□□ 1.59
PEX11A-202ENST00000557982 ARHGEF11O15085 1522 aa24.96■■□□□ 1.59
PEX11A-202ENST00000557982 WDR97A6NE52 1622 aa24.9■■□□□ 1.58
PEX11A-202ENST00000557982 SNAPC4Q5SXM2 1469 aa24.85■■□□□ 1.57
PEX11A-202ENST00000557982 CYB5RLQ6IPT4 315 aa24.82■■□□□ 1.56
PEX11A-202ENST00000557982 GRIN2BQ13224 1484 aa24.81■■□□□ 1.56
PEX11A-202ENST00000557982 CHMP7Q8WUX9 453 aaPredicted RBP24.8■■□□□ 1.56
PEX11A-202ENST00000557982 MAGI1Q96QZ7 1491 aaPredicted RBP24.8■■□□□ 1.56
PEX11A-202ENST00000557982 GAPVD1Q14C86 1478 aa24.74■■□□□ 1.55
PEX11A-202ENST00000557982 PBRM1Q86U86 1689 aa24.72■■□□□ 1.55
PEX11A-202ENST00000557982 SYNJ2O15056 1496 aa24.71■■□□□ 1.55
PEX11A-202ENST00000557982 ARAP1Q96P48 1450 aa24.71■■□□□ 1.55
PEX11A-202ENST00000557982 SYNJ1O43426 1573 aa24.71■■□□□ 1.55
PEX11A-202ENST00000557982 ABCA10Q8WWZ4 1543 aa24.71■■□□□ 1.55
PEX11A-202ENST00000557982 CLASP1Q7Z460 1538 aa24.69■■□□□ 1.54
PEX11A-202ENST00000557982 ABCA5Q8WWZ7 1642 aa24.66■■□□□ 1.54
PEX11A-202ENST00000557982 WRNQ14191 1432 aaPredicted RBP eCLIP24.65■■□□□ 1.54
PEX11A-202ENST00000557982 TOP2BQ02880 1626 aa24.61■■□□□ 1.53
PEX11A-202ENST00000557982 BIVM-ERCC5R4GMW8 1640 aa24.61■■□□□ 1.53
PEX11A-202ENST00000557982 TRHP20396 242 aaPredicted RBP24.53■■□□□ 1.52
PEX11A-202ENST00000557982 GRIN2AQ12879 1464 aa24.49■■□□□ 1.51
PEX11A-202ENST00000557982 ADAMTS12P58397 1594 aa24.46■■□□□ 1.51
PEX11A-202ENST00000557982 FHAD1B1AJZ9 1412 aa24.42■■□□□ 1.5
PEX11A-202ENST00000557982 ERICH3Q5RHP9 1530 aa24.4■■□□□ 1.5
PEX11A-202ENST00000557982 CEP170Q5SW79 1584 aa24.38■■□□□ 1.49
PEX11A-202ENST00000557982 NUP160Q12769 1436 aa24.38■■□□□ 1.49
PEX11A-202ENST00000557982 ERCC6L2Q5T890 1561 aa24.32■■□□□ 1.48
PEX11A-202ENST00000557982 SHROOM2Q13796 1616 aa24.28■■□□□ 1.48
PEX11A-202ENST00000557982 JPH4Q96JJ6 628 aa24.18■■□□□ 1.46
PEX11A-202ENST00000557982 PRG4Q92954 1404 aaPredicted RBP24.18■■□□□ 1.46
PEX11A-202ENST00000557982 KIF27Q86VH2 1401 aa24.14■■□□□ 1.45
PEX11A-202ENST00000557982 RUSC2Q8N2Y8 1516 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms